RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 BCL11AQ9H165 835 aa17.71■□□□□ 0.43
HSPG2-207ENST00000453796 DHX36Q9H2U1 1008 aaKnown RBP17.71■□□□□ 0.43
HSPG2-207ENST00000453796 BOLA2Q9H3K6 86 aa17.71■□□□□ 0.43
HSPG2-207ENST00000453796 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.71■□□□□ 0.43
HSPG2-207ENST00000453796 ZCCHC17Q9NP64 241 aaKnown RBP17.71■□□□□ 0.43
HSPG2-207ENST00000453796 TCRBV5S4A2TA0A5A2 114 aa17.7■□□□□ 0.42
HSPG2-207ENST00000453796 PDE6AP16499 860 aa17.7■□□□□ 0.42
HSPG2-207ENST00000453796 DNAJC18Q9H819 358 aa17.7■□□□□ 0.42
HSPG2-207ENST00000453796 PAG1Q9NWQ8 432 aa17.7■□□□□ 0.42
HSPG2-207ENST00000453796 PI4KBQ9UBF8 816 aa17.7■□□□□ 0.42
HSPG2-207ENST00000453796 HERC5Q9UII4 1024 aaKnown RBP17.7■□□□□ 0.42
HSPG2-207ENST00000453796 CXCL11O14625 94 aa17.69■□□□□ 0.42
HSPG2-207ENST00000453796 RRP1BQ14684 758 aaKnown RBP17.69■□□□□ 0.42
HSPG2-207ENST00000453796 TAF1CQ15572 869 aaPredicted RBP17.69■□□□□ 0.42
HSPG2-207ENST00000453796 SLC9C2Q5TAH2 1124 aa17.69■□□□□ 0.42
HSPG2-207ENST00000453796 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.69■□□□□ 0.42
HSPG2-207ENST00000453796 AFG3L2Q9Y4W6 797 aa17.69■□□□□ 0.42
HSPG2-207ENST00000453796 LOC285556D6RIA3 1793 aa17.68■□□□□ 0.42
HSPG2-207ENST00000453796 PICK1Q9NRD5 415 aa17.68■□□□□ 0.42
HSPG2-207ENST00000453796 PALD1Q9ULE6 856 aa17.68■□□□□ 0.42
HSPG2-207ENST00000453796 ZHX2Q9Y6X8 837 aa17.68■□□□□ 0.42
HSPG2-207ENST00000453796 ZNF532Q9HCE3 1301 aa17.68■□□□□ 0.42
HSPG2-207ENST00000453796 ZSWIM8A7E2V4 1837 aa17.68■□□□□ 0.42
HSPG2-207ENST00000453796 BAZ2AQ9UIF9 1905 aaKnown RBP17.67■□□□□ 0.42
HSPG2-207ENST00000453796 A0A0G2JLL6 359 aaPredicted RBP17.67■□□□□ 0.42
HSPG2-207ENST00000453796 ADD2P35612 726 aa17.67■□□□□ 0.42
HSPG2-207ENST00000453796 CAP2P40123 477 aa17.67■□□□□ 0.42
HSPG2-207ENST00000453796 CAP1Q01518 475 aa17.67■□□□□ 0.42
HSPG2-207ENST00000453796 PRRT2Q7Z6L0 340 aaPredicted RBP17.67■□□□□ 0.42
HSPG2-207ENST00000453796 ANKRD23Q86SG2 305 aa17.67■□□□□ 0.42
HSPG2-207ENST00000453796 ZFYVE28Q9HCC9 887 aa17.67■□□□□ 0.42
HSPG2-207ENST00000453796 ECHDC1Q9NTX5 307 aa17.67■□□□□ 0.42
HSPG2-207ENST00000453796 HTTP42858 3142 aa17.67■□□□□ 0.42
HSPG2-207ENST00000453796 MAGEB6P1A0A0J9YX57 407 aa17.66■□□□□ 0.42
HSPG2-207ENST00000453796 PKN2Q16513 984 aaKnown RBP17.66■□□□□ 0.42
HSPG2-207ENST00000453796 GPAT2Q6NUI2 795 aa17.66■□□□□ 0.42
HSPG2-207ENST00000453796 CCDC84Q86UT8 332 aaPredicted RBP17.66■□□□□ 0.42
HSPG2-207ENST00000453796 FOXP4Q8IVH2 680 aaPredicted RBP17.66■□□□□ 0.42
HSPG2-207ENST00000453796 SAP30BPQ9UHR5 308 aaKnown RBP17.66■□□□□ 0.42
HSPG2-207ENST00000453796 TLR2O60603 784 aa17.65■□□□□ 0.42
HSPG2-207ENST00000453796 USP5P45974 858 aa17.65■□□□□ 0.42
HSPG2-207ENST00000453796 SP3Q02447 781 aa17.65■□□□□ 0.42
HSPG2-207ENST00000453796 SLFNL1Q499Z3 407 aa17.65■□□□□ 0.42
HSPG2-207ENST00000453796 ADGRA2Q96PE1 1338 aa17.65■□□□□ 0.42
HSPG2-207ENST00000453796 PDHXO00330 501 aa17.64■□□□□ 0.41
HSPG2-207ENST00000453796 CHGBP05060 677 aa17.64■□□□□ 0.41
HSPG2-207ENST00000453796 JAG1P78504 1218 aa17.64■□□□□ 0.41
HSPG2-207ENST00000453796 OTOP1Q7RTM1 612 aa17.64■□□□□ 0.41
HSPG2-207ENST00000453796 CD99L2Q8TCZ2 262 aa17.64■□□□□ 0.41
HSPG2-207ENST00000453796 ERO1AQ96HE7 468 aa17.64■□□□□ 0.41
HSPG2-207ENST00000453796 MYH8P13535 1937 aa17.64■□□□□ 0.41
HSPG2-207ENST00000453796 MGAMO43451 1857 aa17.63■□□□□ 0.41
HSPG2-207ENST00000453796 HLA-DOAP06340 250 aa17.63■□□□□ 0.41
HSPG2-207ENST00000453796 HDAC1Q13547 482 aaPredicted RBP17.63■□□□□ 0.41
HSPG2-207ENST00000453796 AAMPQ13685 434 aa17.63■□□□□ 0.41
HSPG2-207ENST00000453796 UBE3CQ15386 1083 aa17.63■□□□□ 0.41
HSPG2-207ENST00000453796 SLC4A8Q2Y0W8 1093 aa17.63■□□□□ 0.41
HSPG2-207ENST00000453796 TSHZ3Q63HK5 1081 aa17.63■□□□□ 0.41
HSPG2-207ENST00000453796 FBXO46Q6PJ61 603 aaPredicted RBP17.63■□□□□ 0.41
HSPG2-207ENST00000453796 LCORLQ8N3X6 602 aa17.63■□□□□ 0.41
HSPG2-207ENST00000453796 TBC1D2Q9BYX2 928 aa17.63■□□□□ 0.41
HSPG2-207ENST00000453796 EHD4Q9H223 541 aa17.63■□□□□ 0.41
HSPG2-207ENST00000453796 SALL3Q9BXA9 1300 aa17.63■□□□□ 0.41
HSPG2-207ENST00000453796 TRIM75PA6NK02 468 aa17.62■□□□□ 0.41
HSPG2-207ENST00000453796 CCDC85CA6NKD9 419 aa17.62■□□□□ 0.41
HSPG2-207ENST00000453796 SHROOM1Q2M3G4 852 aaPredicted RBP17.62■□□□□ 0.41
HSPG2-207ENST00000453796 TATDN1Q6P1N9 297 aa17.62■□□□□ 0.41
HSPG2-207ENST00000453796 C17orf99Q6UX52 265 aa17.62■□□□□ 0.41
HSPG2-207ENST00000453796 FASTKD5Q7L8L6 764 aaKnown RBP17.62■□□□□ 0.41
HSPG2-207ENST00000453796 CRACR2BQ8N4Y2 399 aaPredicted RBP17.62■□□□□ 0.41
HSPG2-207ENST00000453796 CRNKL1Q9BZJ0 848 aaKnown RBP17.62■□□□□ 0.41
HSPG2-207ENST00000453796 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.62■□□□□ 0.412e-15■■■■■ 41.4
HSPG2-207ENST00000453796 HPS5Q9UPZ3 1129 aa17.62■□□□□ 0.41
HSPG2-207ENST00000453796 TRIM17Q9Y577 477 aa17.62■□□□□ 0.41
HSPG2-207ENST00000453796 USP17L5A8MUK1 530 aa17.61■□□□□ 0.41
HSPG2-207ENST00000453796 ASNSP08243 561 aa17.61■□□□□ 0.41
HSPG2-207ENST00000453796 PLCD1P51178 756 aa17.61■□□□□ 0.41
HSPG2-207ENST00000453796 ZNF280CQ8ND82 737 aa17.61■□□□□ 0.41
HSPG2-207ENST00000453796 PI4K2BQ8TCG2 481 aa17.61■□□□□ 0.41
HSPG2-207ENST00000453796 OTUD7AQ8TE49 926 aaPredicted RBP17.61■□□□□ 0.41
HSPG2-207ENST00000453796 SDR42E1Q8WUS8 393 aa17.61■□□□□ 0.41
HSPG2-207ENST00000453796 GPATCH3Q96I76 525 aa17.61■□□□□ 0.41
HSPG2-207ENST00000453796 ARMT1Q9H993 441 aa17.61■□□□□ 0.41
HSPG2-207ENST00000453796 DCP1AQ9NPI6 582 aaPredicted RBP17.61■□□□□ 0.41
HSPG2-207ENST00000453796 GINM1Q9NU53 330 aa17.61■□□□□ 0.41
HSPG2-207ENST00000453796 SERPINB13Q9UIV8 391 aa17.61■□□□□ 0.41
HSPG2-207ENST00000453796 SLC45A1Q9Y2W3 748 aa17.61■□□□□ 0.41
HSPG2-207ENST00000453796 TTC41PQ6P2S7 1318 aa17.61■□□□□ 0.41
HSPG2-207ENST00000453796 CENPFP49454 3210 aa17.61■□□□□ 0.41
HSPG2-207ENST00000453796 MBD4O95243 580 aa17.6■□□□□ 0.41
HSPG2-207ENST00000453796 GABPAQ06546 454 aa17.6■□□□□ 0.41
HSPG2-207ENST00000453796 SPP2Q13103 211 aa17.6■□□□□ 0.41
HSPG2-207ENST00000453796 SH3D19Q5HYK7 790 aa17.6■□□□□ 0.41
HSPG2-207ENST00000453796 GADL1Q6ZQY3 521 aa17.6■□□□□ 0.41
HSPG2-207ENST00000453796 TTC6Q86TZ1 520 aa17.6■□□□□ 0.41
HSPG2-207ENST00000453796 KBTBD3Q8NAB2 608 aa17.6■□□□□ 0.41
HSPG2-207ENST00000453796 GCC1Q96CN9 775 aa17.6■□□□□ 0.41
HSPG2-207ENST00000453796 WDR18Q9BV38 432 aa17.6■□□□□ 0.41
HSPG2-207ENST00000453796 GDF11O95390 407 aa17.59■□□□□ 0.41
HSPG2-207ENST00000453796 EVX2Q03828 476 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms