RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 NAA16Q6N069 864 aaPredicted RBP11.56□□□□□ -0.56
CDC42EP3-203ENST00000453555 CLASRPQ8N2M8 674 aaKnown RBP11.56□□□□□ -0.56
CDC42EP3-203ENST00000453555 TMEM121BQ9BXQ6 578 aaPredicted RBP11.56□□□□□ -0.56
CDC42EP3-203ENST00000453555 PCDH10Q9P2E7 1040 aa11.56□□□□□ -0.56
CDC42EP3-203ENST00000453555 TAOK2Q9UL54 1235 aa11.56□□□□□ -0.56
CDC42EP3-203ENST00000453555 STK24Q9Y6E0 443 aa11.56□□□□□ -0.56
CDC42EP3-203ENST00000453555 ATAD5Q96QE3 1844 aa11.56□□□□□ -0.56
CDC42EP3-203ENST00000453555 RFX7Q2KHR2 1363 aa11.55□□□□□ -0.56
CDC42EP3-203ENST00000453555 MYH1P12882 1939 aa11.55□□□□□ -0.56
CDC42EP3-203ENST00000453555 DDTLA6NHG4 134 aaPredicted RBP11.55□□□□□ -0.56
CDC42EP3-203ENST00000453555 RAB11FIP3O75154 756 aa11.55□□□□□ -0.56
CDC42EP3-203ENST00000453555 ENTPD3O75355 529 aa11.55□□□□□ -0.56
CDC42EP3-203ENST00000453555 IFIT2P09913 472 aaKnown RBP11.55□□□□□ -0.56
CDC42EP3-203ENST00000453555 SLURP2P0DP57 97 aa11.55□□□□□ -0.56
CDC42EP3-203ENST00000453555 INPP5BP32019 993 aa11.55□□□□□ -0.56
CDC42EP3-203ENST00000453555 RRP1P56182 461 aaKnown RBP11.55□□□□□ -0.56
CDC42EP3-203ENST00000453555 INHBEP58166 350 aa11.55□□□□□ -0.56
CDC42EP3-203ENST00000453555 SH3BP5LQ7L8J4 393 aa11.55□□□□□ -0.56
CDC42EP3-203ENST00000453555 ADGRA1Q86SQ6 560 aa11.55□□□□□ -0.56
CDC42EP3-203ENST00000453555 SH3RF3Q8TEJ3 882 aaPredicted RBP11.55□□□□□ -0.56
CDC42EP3-203ENST00000453555 NOL10Q9BSC4 688 aaKnown RBP11.55□□□□□ -0.56
CDC42EP3-203ENST00000453555 ANTXR1Q9H6X2 564 aa11.55□□□□□ -0.56
CDC42EP3-203ENST00000453555 AATFQ9NY61 560 aaKnown RBP eCLIP11.55□□□□□ -0.56
CDC42EP3-203ENST00000453555 SNCAIPQ9Y6H5 919 aa11.55□□□□□ -0.56
CDC42EP3-203ENST00000453555 IGF2BP3O00425 579 aaKnown RBP eCLIP11.54□□□□□ -0.56
CDC42EP3-203ENST00000453555 SMARCA5O60264 1052 aaPredicted RBP11.54□□□□□ -0.56
CDC42EP3-203ENST00000453555 IDH1O75874 414 aaKnown RBP11.54□□□□□ -0.56
CDC42EP3-203ENST00000453555 DGKZQ13574 1117 aa11.54□□□□□ -0.56
CDC42EP3-203ENST00000453555 TEX11Q8IYF3 940 aa11.54□□□□□ -0.56
CDC42EP3-203ENST00000453555 R3HDMLQ9H3Y0 253 aa11.54□□□□□ -0.56
CDC42EP3-203ENST00000453555 DOCK1Q14185 1865 aa11.54□□□□□ -0.56
CDC42EP3-203ENST00000453555 MYH7P12883 1935 aa11.54□□□□□ -0.56
CDC42EP3-203ENST00000453555 SIPA1L1O43166 1804 aa11.53□□□□□ -0.56
CDC42EP3-203ENST00000453555 STK25O00506 426 aa11.53□□□□□ -0.56
CDC42EP3-203ENST00000453555 BAG3O95817 575 aa11.53□□□□□ -0.56
CDC42EP3-203ENST00000453555 CYP7A1P22680 504 aa11.53□□□□□ -0.56
CDC42EP3-203ENST00000453555 ERO1BQ86YB8 467 aa11.53□□□□□ -0.56
CDC42EP3-203ENST00000453555 DNAJC2Q99543 621 aaKnown RBP11.53□□□□□ -0.56
CDC42EP3-203ENST00000453555 PTPN18Q99952 460 aa11.53□□□□□ -0.56
CDC42EP3-203ENST00000453555 MCOLN1Q9GZU1 580 aa11.53□□□□□ -0.56
CDC42EP3-203ENST00000453555 ZNF112Q9UJU3 913 aa11.53□□□□□ -0.56
CDC42EP3-203ENST00000453555 PHIPQ8WWQ0 1821 aa11.53□□□□□ -0.56
CDC42EP3-203ENST00000453555 CCL15-CCL14A0A0B4J2E2 113 aa11.52□□□□□ -0.57
CDC42EP3-203ENST00000453555 TESPA1A2RU30 521 aaPredicted RBP11.52□□□□□ -0.57
CDC42EP3-203ENST00000453555 SPDYE5A6NIY4 337 aa11.52□□□□□ -0.57
CDC42EP3-203ENST00000453555 FAM196BA6NMK8 535 aa11.52□□□□□ -0.57
CDC42EP3-203ENST00000453555 GPR25O00155 361 aa11.52□□□□□ -0.57
CDC42EP3-203ENST00000453555 MAP4K4O95819 1239 aaPredicted RBP11.52□□□□□ -0.57
CDC42EP3-203ENST00000453555 ALDH1A1P00352 501 aa11.52□□□□□ -0.57
CDC42EP3-203ENST00000453555 GTF2A2P52657 109 aa11.52□□□□□ -0.57
CDC42EP3-203ENST00000453555 DYNLL1P63167 89 aaKnown RBP11.52□□□□□ -0.57
CDC42EP3-203ENST00000453555 CCL15Q16663 113 aa11.52□□□□□ -0.57
CDC42EP3-203ENST00000453555 OTUD7BQ6GQQ9 843 aa11.52□□□□□ -0.57
CDC42EP3-203ENST00000453555 MAGEB6Q8N7X4 407 aa11.52□□□□□ -0.57
CDC42EP3-203ENST00000453555 TGFBRAP1Q8WUH2 860 aa11.52□□□□□ -0.57
CDC42EP3-203ENST00000453555 ZNF296Q8WUU4 475 aaPredicted RBP11.52□□□□□ -0.57
CDC42EP3-203ENST00000453555 BRI3BPQ8WY22 251 aa11.52□□□□□ -0.57
CDC42EP3-203ENST00000453555 ABHD8Q96I13 439 aa11.52□□□□□ -0.57
CDC42EP3-203ENST00000453555 LRRCC1Q9C099 1032 aa11.52□□□□□ -0.57
CDC42EP3-203ENST00000453555 OSBPL5Q9H0X9 879 aaPredicted RBP11.52□□□□□ -0.57
CDC42EP3-203ENST00000453555 ATRNL1Q5VV63 1379 aa11.52□□□□□ -0.57
CDC42EP3-203ENST00000453555 PTPRFP10586 1907 aa11.51□□□□□ -0.57
CDC42EP3-203ENST00000453555 PHF20L1A8MW92 1017 aa11.51□□□□□ -0.57
CDC42EP3-203ENST00000453555 GOLIM4O00461 696 aa11.51□□□□□ -0.57
CDC42EP3-203ENST00000453555 IRF6O14896 467 aa11.51□□□□□ -0.57
CDC42EP3-203ENST00000453555 PPATQ06203 517 aa11.51□□□□□ -0.57
CDC42EP3-203ENST00000453555 PPIL2Q13356 520 aa11.51□□□□□ -0.57
CDC42EP3-203ENST00000453555 MAPKAPK5Q8IW41 473 aa11.51□□□□□ -0.57
CDC42EP3-203ENST00000453555 MIGA1Q8NAN2 632 aa11.51□□□□□ -0.57
CDC42EP3-203ENST00000453555 EDC3Q96F86 508 aaKnown RBP11.51□□□□□ -0.57
CDC42EP3-203ENST00000453555 CRBNQ96SW2 442 aa11.51□□□□□ -0.57
CDC42EP3-203ENST00000453555 BOLA2Q9H3K6 86 aa11.51□□□□□ -0.57
CDC42EP3-203ENST00000453555 PCDHB15Q9Y5E8 787 aa11.51□□□□□ -0.57
CDC42EP3-203ENST00000453555 FKTNO75072 461 aa11.5□□□□□ -0.57
CDC42EP3-203ENST00000453555 PPP4CP60510 307 aa11.5□□□□□ -0.57
CDC42EP3-203ENST00000453555 MAP3K12Q12852 859 aa11.5□□□□□ -0.57
CDC42EP3-203ENST00000453555 CRHR2Q13324 411 aa11.5□□□□□ -0.57
CDC42EP3-203ENST00000453555 SNAPC2Q13487 334 aa11.5□□□□□ -0.57
CDC42EP3-203ENST00000453555 TTF1Q15361 905 aaPredicted RBP11.5□□□□□ -0.57
CDC42EP3-203ENST00000453555 NOL9Q5SY16 702 aaKnown RBP11.5□□□□□ -0.57
CDC42EP3-203ENST00000453555 FAM43AQ8N2R8 423 aa11.5□□□□□ -0.57
CDC42EP3-203ENST00000453555 CFHR5Q9BXR6 569 aa11.5□□□□□ -0.57
CDC42EP3-203ENST00000453555 DCTPP1Q9H773 170 aa11.5□□□□□ -0.57
CDC42EP3-203ENST00000453555 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.5□□□□□ -0.57
CDC42EP3-203ENST00000453555 NAV1Q8NEY1 1877 aa11.5□□□□□ -0.57
CDC42EP3-203ENST00000453555 CCDC85CA6NKD9 419 aa11.49□□□□□ -0.57
CDC42EP3-203ENST00000453555 CETPP11597 493 aa11.49□□□□□ -0.57
CDC42EP3-203ENST00000453555 MAP3K10Q02779 954 aa11.49□□□□□ -0.57
CDC42EP3-203ENST00000453555 TAF1CQ15572 869 aaPredicted RBP11.49□□□□□ -0.57
CDC42EP3-203ENST00000453555 SLC4A8Q2Y0W8 1093 aa11.49□□□□□ -0.57
CDC42EP3-203ENST00000453555 CTU1Q7Z7A3 348 aaKnown RBP11.49□□□□□ -0.57
CDC42EP3-203ENST00000453555 SCYL3Q8IZE3 742 aa11.49□□□□□ -0.57
CDC42EP3-203ENST00000453555 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.49□□□□□ -0.57
CDC42EP3-203ENST00000453555 MARVELD3Q96A59 401 aa11.49□□□□□ -0.57
CDC42EP3-203ENST00000453555 PICK1Q9NRD5 415 aa11.49□□□□□ -0.57
CDC42EP3-203ENST00000453555 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.49□□□□□ -0.57
CDC42EP3-203ENST00000453555 SAP30BPQ9UHR5 308 aaKnown RBP11.49□□□□□ -0.57
CDC42EP3-203ENST00000453555 FLT1P17948 1338 aa11.49□□□□□ -0.57
CDC42EP3-203ENST00000453555 COL2A1P02458 1487 aaPredicted RBP11.49□□□□□ -0.57
CDC42EP3-203ENST00000453555 ZSWIM8A7E2V4 1837 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms