RNA–Protein interactions for RNA: ENST00000449757.5

DDX39B-211, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-211ENST00000449757 PABPC4Q13310 644 aaKnown RBP eCLIP12.72□□□□□ -0.37
DDX39B-211ENST00000449757 IRF5Q13568 498 aa12.72□□□□□ -0.37
DDX39B-211ENST00000449757 FAM110CQ1W6H9 321 aa12.72□□□□□ -0.37
DDX39B-211ENST00000449757 PI16Q6UXB8 463 aa12.72□□□□□ -0.37
DDX39B-211ENST00000449757 PROCA1Q8NCQ7 364 aaPredicted RBP12.72□□□□□ -0.37
DDX39B-211ENST00000449757 DIS3LQ8TF46 1054 aaKnown RBP12.72□□□□□ -0.37
DDX39B-211ENST00000449757 NOL10Q9BSC4 688 aaKnown RBP12.72□□□□□ -0.37
DDX39B-211ENST00000449757 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.72□□□□□ -0.37
DDX39B-211ENST00000449757 OSBPL5Q9H0X9 879 aaPredicted RBP12.72□□□□□ -0.37
DDX39B-211ENST00000449757 GPR75-ASB3A0A0A6YYF3 556 aa12.71□□□□□ -0.37
DDX39B-211ENST00000449757 HMGCRP04035 888 aa12.71□□□□□ -0.37
DDX39B-211ENST00000449757 LDHCP07864 332 aa12.71□□□□□ -0.37
DDX39B-211ENST00000449757 RHBDL3P58872 404 aa12.71□□□□□ -0.37
DDX39B-211ENST00000449757 TBC1D9Q6ZT07 1266 aa12.71□□□□□ -0.37
DDX39B-211ENST00000449757 TEX11Q8IYF3 940 aa12.71□□□□□ -0.37
DDX39B-211ENST00000449757 C7orf61Q8IZ16 206 aa12.71□□□□□ -0.37
DDX39B-211ENST00000449757 ZNF280CQ8ND82 737 aa12.71□□□□□ -0.37
DDX39B-211ENST00000449757 PAWRQ96IZ0 340 aaKnown RBP12.71□□□□□ -0.37
DDX39B-211ENST00000449757 LAMA3Q16787 3333 aa12.71□□□□□ -0.38
DDX39B-211ENST00000449757 COL2A1P02458 1487 aaPredicted RBP12.71□□□□□ -0.38
DDX39B-211ENST00000449757 GNAI3P08754 354 aa12.7□□□□□ -0.38
DDX39B-211ENST00000449757 GCLCP48506 637 aaPredicted RBP12.7□□□□□ -0.38
DDX39B-211ENST00000449757 IRX3P78415 501 aaPredicted RBP12.7□□□□□ -0.38
DDX39B-211ENST00000449757 MAP3K10Q02779 954 aa12.7□□□□□ -0.38
DDX39B-211ENST00000449757 NECAB2Q7Z6G3 386 aa12.7□□□□□ -0.38
DDX39B-211ENST00000449757 SPATA5Q8NB90 893 aa12.7□□□□□ -0.38
DDX39B-211ENST00000449757 FAM163AQ96GL9 167 aaPredicted RBP12.7□□□□□ -0.38
DDX39B-211ENST00000449757 TRIM34Q9BYJ4 488 aa12.7□□□□□ -0.38
DDX39B-211ENST00000449757 AS3MTQ9HBK9 375 aa12.7□□□□□ -0.38
DDX39B-211ENST00000449757 PAK6Q9NQU5 681 aaPredicted RBP12.7□□□□□ -0.38
DDX39B-211ENST00000449757 HMG20BQ9P0W2 317 aa12.7□□□□□ -0.38
DDX39B-211ENST00000449757 STAP2Q9UGK3 403 aa12.7□□□□□ -0.38
DDX39B-211ENST00000449757 ZMYND8Q9ULU4 1186 aaPredicted RBP12.7□□□□□ -0.38
DDX39B-211ENST00000449757 MYH1P12882 1939 aa12.7□□□□□ -0.38
DDX39B-211ENST00000449757 USP17L5A8MUK1 530 aa12.69□□□□□ -0.38
DDX39B-211ENST00000449757 TBC1D12O60347 775 aa12.69□□□□□ -0.38
DDX39B-211ENST00000449757 CT47B1P0C2W7 299 aaPredicted RBP12.69□□□□□ -0.38
DDX39B-211ENST00000449757 ZNF384Q8TF68 577 aa12.69□□□□□ -0.38
DDX39B-211ENST00000449757 NSUN4Q96CB9 384 aaKnown RBP12.69□□□□□ -0.38
DDX39B-211ENST00000449757 TBC1D2Q9BYX2 928 aa12.69□□□□□ -0.38
DDX39B-211ENST00000449757 ASCC2Q9H1I8 757 aaPredicted RBP12.69□□□□□ -0.38
DDX39B-211ENST00000449757 PRO3102Q9H379 93 aa12.69□□□□□ -0.38
DDX39B-211ENST00000449757 TMOD4Q9NZQ9 345 aa12.69□□□□□ -0.38
DDX39B-211ENST00000449757 LRP2BPQ9P2M1 347 aa12.69□□□□□ -0.38
DDX39B-211ENST00000449757 FRMPD3Q5JV73 1810 aa12.69□□□□□ -0.38
DDX39B-211ENST00000449757 SOX1O00570 391 aaPredicted RBP12.68□□□□□ -0.38
DDX39B-211ENST00000449757 CAP2P40123 477 aa12.68□□□□□ -0.38
DDX39B-211ENST00000449757 TRIM32Q13049 653 aa12.68□□□□□ -0.38
DDX39B-211ENST00000449757 MTMR2Q13614 643 aa12.68□□□□□ -0.38
DDX39B-211ENST00000449757 SH3RF3Q8TEJ3 882 aaPredicted RBP12.68□□□□□ -0.38
DDX39B-211ENST00000449757 LRCH3Q96II8 777 aa12.68□□□□□ -0.38
DDX39B-211ENST00000449757 CRISPLD2Q9H0B8 497 aa12.68□□□□□ -0.38
DDX39B-211ENST00000449757 CWC22Q9HCG8 908 aaKnown RBP12.68□□□□□ -0.38
DDX39B-211ENST00000449757 HMX1Q9NP08 348 aaPredicted RBP12.68□□□□□ -0.38
DDX39B-211ENST00000449757 AATFQ9NY61 560 aaKnown RBP eCLIP12.68□□□□□ -0.384e-32■■■□□ 19.1
DDX39B-211ENST00000449757 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.68□□□□□ -0.38
DDX39B-211ENST00000449757 A0A1W2PPC1 479 aa12.67□□□□□ -0.38
DDX39B-211ENST00000449757 ZBTB22O15209 634 aa12.67□□□□□ -0.38
DDX39B-211ENST00000449757 NPM3O75607 178 aaKnown RBP12.67□□□□□ -0.38
DDX39B-211ENST00000449757 MAP4K4O95819 1239 aaPredicted RBP12.67□□□□□ -0.38
DDX39B-211ENST00000449757 CAPN2P17655 700 aa12.67□□□□□ -0.38
DDX39B-211ENST00000449757 CYP2B6P20813 491 aa12.67□□□□□ -0.38
DDX39B-211ENST00000449757 ARID4AP29374 1257 aaPredicted RBP12.67□□□□□ -0.38
DDX39B-211ENST00000449757 MCAMP43121 646 aa12.67□□□□□ -0.38
DDX39B-211ENST00000449757 G3BP1Q13283 466 aaKnown RBP eCLIP12.67□□□□□ -0.38
DDX39B-211ENST00000449757 OS9Q13438 667 aaPredicted RBP12.67□□□□□ -0.38
DDX39B-211ENST00000449757 TTC39AQ5SRH9 613 aa12.67□□□□□ -0.38
DDX39B-211ENST00000449757 MAPKAPK5Q8IW41 473 aa12.67□□□□□ -0.38
DDX39B-211ENST00000449757 CCAR1Q8IX12 1150 aaKnown RBP12.67□□□□□ -0.38
DDX39B-211ENST00000449757 CRACR2BQ8N4Y2 399 aaPredicted RBP12.67□□□□□ -0.38
DDX39B-211ENST00000449757 SLC17A8Q8NDX2 589 aa12.67□□□□□ -0.38
DDX39B-211ENST00000449757 SNRKQ9NRH2 765 aa12.67□□□□□ -0.38
DDX39B-211ENST00000449757 HERC5Q9UII4 1024 aaKnown RBP12.67□□□□□ -0.38
DDX39B-211ENST00000449757 RPTORQ8N122 1335 aa12.66□□□□□ -0.38
DDX39B-211ENST00000449757 GDF11O95390 407 aa12.66□□□□□ -0.38
DDX39B-211ENST00000449757 UQCRFS1P1P0C7P4 283 aa12.66□□□□□ -0.38
DDX39B-211ENST00000449757 SYN1P17600 705 aa12.66□□□□□ -0.38
DDX39B-211ENST00000449757 RARSP54136 660 aaKnown RBP12.66□□□□□ -0.38
DDX39B-211ENST00000449757 PDE3AQ14432 1141 aa12.66□□□□□ -0.38
DDX39B-211ENST00000449757 RRP1BQ14684 758 aaKnown RBP12.66□□□□□ -0.38
DDX39B-211ENST00000449757 NAA16Q6N069 864 aaPredicted RBP12.66□□□□□ -0.38
DDX39B-211ENST00000449757 ANKLE1Q8NAG6 615 aa12.66□□□□□ -0.38
DDX39B-211ENST00000449757 TRIB2Q92519 343 aa12.66□□□□□ -0.38
DDX39B-211ENST00000449757 C11orf49Q9H6J7 331 aa12.66□□□□□ -0.38
DDX39B-211ENST00000449757 PEX10O60683 326 aa12.65□□□□□ -0.38
DDX39B-211ENST00000449757 BAG3O95817 575 aa12.65□□□□□ -0.38
DDX39B-211ENST00000449757 GNAI2P04899 355 aa12.65□□□□□ -0.38
DDX39B-211ENST00000449757 PRKAR2AP13861 404 aaKnown RBP12.65□□□□□ -0.38
DDX39B-211ENST00000449757 PLCG2P16885 1265 aa12.65□□□□□ -0.38
DDX39B-211ENST00000449757 MTX1Q13505 466 aa12.65□□□□□ -0.38
DDX39B-211ENST00000449757 TRMT2AQ8IZ69 625 aaKnown RBP12.65□□□□□ -0.38
DDX39B-211ENST00000449757 TGFBRAP1Q8WUH2 860 aa12.65□□□□□ -0.38
DDX39B-211ENST00000449757 FRAT1Q92837 279 aaPredicted RBP12.65□□□□□ -0.38
DDX39B-211ENST00000449757 NUDT12Q9BQG2 462 aa12.65□□□□□ -0.38
DDX39B-211ENST00000449757 PAGR1Q9BTK6 254 aa12.65□□□□□ -0.38
DDX39B-211ENST00000449757 NBPF3Q9H094 633 aa12.65□□□□□ -0.38
DDX39B-211ENST00000449757 PI4KBQ9UBF8 816 aa12.65□□□□□ -0.38
DDX39B-211ENST00000449757 SAP30BPQ9UHR5 308 aaKnown RBP12.65□□□□□ -0.38
DDX39B-211ENST00000449757 FLT1P17948 1338 aa12.64□□□□□ -0.39
DDX39B-211ENST00000449757 NAV1Q8NEY1 1877 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms