RNA–Protein interactions for RNA: ENST00000448789.2

RAB5B-202, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB5B, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-202ENST00000448789 SCRN1Q12765 414 aa17.73■□□□□ 0.43
RAB5B-202ENST00000448789 TMEM67Q5HYA8 995 aa17.73■□□□□ 0.43
RAB5B-202ENST00000448789 CWC22Q9HCG8 908 aaKnown RBP17.73■□□□□ 0.43
RAB5B-202ENST00000448789 ECM29Q5VYK3 1845 aa17.73■□□□□ 0.43
RAB5B-202ENST00000448789 SHTN1A0MZ66 631 aa17.72■□□□□ 0.43
RAB5B-202ENST00000448789 ZFPM1Q8IX07 1006 aa17.72■□□□□ 0.43
RAB5B-202ENST00000448789 ESR2Q92731 530 aa17.72■□□□□ 0.43
RAB5B-202ENST00000448789 TMEM87BQ96K49 555 aa17.72■□□□□ 0.43
RAB5B-202ENST00000448789 PRMT6Q96LA8 375 aaPredicted RBP17.72■□□□□ 0.43
RAB5B-202ENST00000448789 NCOA5Q9HCD5 579 aaKnown RBP17.72■□□□□ 0.43
RAB5B-202ENST00000448789 NAP1L2Q9ULW6 460 aaPredicted RBP17.72■□□□□ 0.43
RAB5B-202ENST00000448789 HPS5Q9UPZ3 1129 aa17.72■□□□□ 0.43
RAB5B-202ENST00000448789 GOLGA8BA8MQT2 603 aa17.72■□□□□ 0.43
RAB5B-202ENST00000448789 IFIT3O14879 490 aaKnown RBP17.72■□□□□ 0.43
RAB5B-202ENST00000448789 RANBP6O60518 1105 aaKnown RBP17.72■□□□□ 0.43
RAB5B-202ENST00000448789 PCP11498 1178 aaKnown RBP17.72■□□□□ 0.43
RAB5B-202ENST00000448789 CCT2P78371 535 aaKnown RBP17.72■□□□□ 0.43
RAB5B-202ENST00000448789 FAM47AQ5JRC9 791 aa17.72■□□□□ 0.43
RAB5B-202ENST00000448789 ZNF274Q96GC6 653 aaPredicted RBP17.72■□□□□ 0.43
RAB5B-202ENST00000448789 OSBPL5Q9H0X9 879 aaPredicted RBP17.72■□□□□ 0.43
RAB5B-202ENST00000448789 TDRD3Q9H7E2 651 aaKnown RBP17.72■□□□□ 0.43
RAB5B-202ENST00000448789 FAM198AQ9UFP1 575 aa17.72■□□□□ 0.43
RAB5B-202ENST00000448789 MYH1P12882 1939 aa17.71■□□□□ 0.43
RAB5B-202ENST00000448789 JAK2O60674 1132 aa17.71■□□□□ 0.43
RAB5B-202ENST00000448789 SLC3A2P08195 630 aaKnown RBP17.71■□□□□ 0.43
RAB5B-202ENST00000448789 ARHGAP27Q6ZUM4 889 aa17.71■□□□□ 0.43
RAB5B-202ENST00000448789 AMOTL1Q8IY63 956 aa17.71■□□□□ 0.43
RAB5B-202ENST00000448789 AGBL3Q8NEM8 1001 aa17.71■□□□□ 0.43
RAB5B-202ENST00000448789 SMC3Q9UQE7 1217 aa17.71■□□□□ 0.43
RAB5B-202ENST00000448789 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.71■□□□□ 0.43
RAB5B-202ENST00000448789 ZNF541Q9H0D2 1346 aa17.71■□□□□ 0.43
RAB5B-202ENST00000448789 SPDYE2BA6NHP3 402 aa17.7■□□□□ 0.42
RAB5B-202ENST00000448789 FZD9O00144 591 aa17.7■□□□□ 0.42
RAB5B-202ENST00000448789 CTDNEP1O95476 244 aa17.7■□□□□ 0.42
RAB5B-202ENST00000448789 SPDYE6P0CI01 402 aa17.7■□□□□ 0.42
RAB5B-202ENST00000448789 YBX3P16989 372 aaKnown RBP eCLIP17.7■□□□□ 0.42
RAB5B-202ENST00000448789 GJB2P29033 226 aa17.7■□□□□ 0.42
RAB5B-202ENST00000448789 PDE4BQ07343 736 aa17.7■□□□□ 0.42
RAB5B-202ENST00000448789 RAB3GAP1Q15042 981 aa17.7■□□□□ 0.42
RAB5B-202ENST00000448789 SEC23AQ15436 765 aa17.7■□□□□ 0.42
RAB5B-202ENST00000448789 APOA5Q6Q788 366 aa17.7■□□□□ 0.42
RAB5B-202ENST00000448789 SGMS1Q86VZ5 419 aa17.7■□□□□ 0.42
RAB5B-202ENST00000448789 ZDHHC9Q9Y397 364 aa17.7■□□□□ 0.42
RAB5B-202ENST00000448789 TNKSO95271 1327 aa17.7■□□□□ 0.42
RAB5B-202ENST00000448789 NMT2O60551 498 aa17.69■□□□□ 0.42
RAB5B-202ENST00000448789 SLURP2P0DP57 97 aa17.69■□□□□ 0.42
RAB5B-202ENST00000448789 RXRAP19793 462 aa17.69■□□□□ 0.42
RAB5B-202ENST00000448789 RASA1P20936 1047 aa17.69■□□□□ 0.42
RAB5B-202ENST00000448789 LIFRP42702 1097 aa17.69■□□□□ 0.42
RAB5B-202ENST00000448789 TCP10Q12799 353 aa17.69■□□□□ 0.42
RAB5B-202ENST00000448789 C16orf86Q6ZW13 317 aa17.69■□□□□ 0.42
RAB5B-202ENST00000448789 UBAC1Q9BSL1 405 aa17.69■□□□□ 0.42
RAB5B-202ENST00000448789 MYL10Q9BUA6 226 aa17.69■□□□□ 0.42
RAB5B-202ENST00000448789 IDI2Q9BXS1 227 aa17.69■□□□□ 0.42
RAB5B-202ENST00000448789 HDAC9Q9UKV0 1011 aa17.69■□□□□ 0.42
RAB5B-202ENST00000448789 CLRN2A0PK11 232 aa17.68■□□□□ 0.42
RAB5B-202ENST00000448789 CDK8P49336 464 aa17.68■□□□□ 0.42
RAB5B-202ENST00000448789 GABPAQ06546 454 aa17.68■□□□□ 0.42
RAB5B-202ENST00000448789 WTAPQ15007 396 aa17.68■□□□□ 0.42
RAB5B-202ENST00000448789 TNIP1Q15025 636 aa17.68■□□□□ 0.42
RAB5B-202ENST00000448789 SH3BP5LQ7L8J4 393 aa17.68■□□□□ 0.42
RAB5B-202ENST00000448789 ENAHQ8N8S7 591 aaPredicted RBP17.68■□□□□ 0.42
RAB5B-202ENST00000448789 NSUN7Q8NE18 718 aaKnown RBP17.68■□□□□ 0.42
RAB5B-202ENST00000448789 ZSCAN10Q96SZ4 725 aaPredicted RBP17.68■□□□□ 0.42
RAB5B-202ENST00000448789 SIPA1L1O43166 1804 aa17.67■□□□□ 0.42
RAB5B-202ENST00000448789 PPFIA3O75145 1194 aa17.67■□□□□ 0.42
RAB5B-202ENST00000448789 DLGAP5Q15398 846 aa17.67■□□□□ 0.42
RAB5B-202ENST00000448789 NFXL1Q6ZNB6 911 aa17.67■□□□□ 0.42
RAB5B-202ENST00000448789 OGFOD1Q8N543 542 aa17.67■□□□□ 0.42
RAB5B-202ENST00000448789 ZBED3Q96IU2 234 aaPredicted RBP17.67■□□□□ 0.42
RAB5B-202ENST00000448789 MTA3Q9BTC8 594 aa17.67■□□□□ 0.42
RAB5B-202ENST00000448789 DDTLA6NHG4 134 aaPredicted RBP17.67■□□□□ 0.42
RAB5B-202ENST00000448789 TSPY2A6NKD2 308 aa17.67■□□□□ 0.42
RAB5B-202ENST00000448789 EGFRP00533 1210 aa17.67■□□□□ 0.42
RAB5B-202ENST00000448789 GMPSP49915 693 aaPredicted RBP17.67■□□□□ 0.42
RAB5B-202ENST00000448789 TFAP4Q01664 338 aa17.67■□□□□ 0.42
RAB5B-202ENST00000448789 SART3Q15020 963 aaKnown RBP17.67■□□□□ 0.42
RAB5B-202ENST00000448789 MICU3Q86XE3 530 aa17.67■□□□□ 0.42
RAB5B-202ENST00000448789 TNPO1Q92973 898 aaKnown RBP17.67■□□□□ 0.42
RAB5B-202ENST00000448789 MKNK2Q9HBH9 465 aa17.67■□□□□ 0.42
RAB5B-202ENST00000448789 GJA3Q9Y6H8 435 aa17.67■□□□□ 0.42
RAB5B-202ENST00000448789 CCDC69A6NI79 296 aa17.66■□□□□ 0.42
RAB5B-202ENST00000448789 LMNB1P20700 586 aa17.66■□□□□ 0.42
RAB5B-202ENST00000448789 EIF6P56537 245 aaKnown RBP17.66■□□□□ 0.42
RAB5B-202ENST00000448789 FOXD4L5Q5VV16 416 aaPredicted RBP17.66■□□□□ 0.42
RAB5B-202ENST00000448789 TTC6Q86TZ1 520 aa17.66■□□□□ 0.42
RAB5B-202ENST00000448789 IQCA1Q86XH1 822 aa17.66■□□□□ 0.42
RAB5B-202ENST00000448789 CCDC144CPQ8IYA2 1237 aa17.66■□□□□ 0.42
RAB5B-202ENST00000448789 MTMR14Q8NCE2 650 aa17.66■□□□□ 0.42
RAB5B-202ENST00000448789 SMARCC2Q8TAQ2 1214 aa17.66■□□□□ 0.42
RAB5B-202ENST00000448789 FOXD4L4Q8WXT5 416 aaPredicted RBP17.66■□□□□ 0.42
RAB5B-202ENST00000448789 IL17RBQ9NRM6 502 aa17.66■□□□□ 0.42
RAB5B-202ENST00000448789 ZNF70Q9UC06 446 aaPredicted RBP17.66■□□□□ 0.42
RAB5B-202ENST00000448789 ERICH2A1L162 156 aa17.65■□□□□ 0.42
RAB5B-202ENST00000448789 PTPDC1A2A3K4 754 aa17.65■□□□□ 0.42
RAB5B-202ENST00000448789 ZBTB43O43298 467 aa17.65■□□□□ 0.42
RAB5B-202ENST00000448789 NPM3O75607 178 aaKnown RBP17.65■□□□□ 0.42
RAB5B-202ENST00000448789 CDC27P30260 824 aa17.65■□□□□ 0.42
RAB5B-202ENST00000448789 ZNF280AP59817 542 aaPredicted RBP17.65■□□□□ 0.42
RAB5B-202ENST00000448789 NUCB2P80303 420 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms