RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 NBPF26B4DH59 902 aa23.35■■□□□ 1.33
SMARCD2-203ENST00000448276 TOB1P50616 345 aaPredicted RBP23.35■■□□□ 1.33
SMARCD2-203ENST00000448276 NBPF14Q5TI25 921 aa23.35■■□□□ 1.33
SMARCD2-203ENST00000448276 NBPF10Q6P3W6 841 aaKnown RBP23.35■■□□□ 1.33
SMARCD2-203ENST00000448276 NBPF15Q8N660 670 aa23.35■■□□□ 1.33
SMARCD2-203ENST00000448276 PSD3Q9NYI0 1048 aa23.35■■□□□ 1.33
SMARCD2-203ENST00000448276 CDC23Q9UJX2 597 aa23.35■■□□□ 1.33
SMARCD2-203ENST00000448276 CPDO75976 1380 aa23.35■■□□□ 1.33
SMARCD2-203ENST00000448276 UBN2Q6ZU65 1347 aa23.35■■□□□ 1.33
SMARCD2-203ENST00000448276 IARSP41252 1262 aaKnown RBP23.35■■□□□ 1.33
SMARCD2-203ENST00000448276 TRDNQ13061 729 aa23.35■■□□□ 1.33
SMARCD2-203ENST00000448276 TRIM29Q14134 588 aa23.35■■□□□ 1.33
SMARCD2-203ENST00000448276 HDXQ7Z353 690 aa23.35■■□□□ 1.33
SMARCD2-203ENST00000448276 ACRBPQ8NEB7 543 aa23.35■■□□□ 1.33
SMARCD2-203ENST00000448276 SH2B2O14492 632 aaPredicted RBP23.34■■□□□ 1.33
SMARCD2-203ENST00000448276 LEKR1Q6ZMV7 388 aa23.34■■□□□ 1.33
SMARCD2-203ENST00000448276 SLC35F6Q8N357 371 aa23.34■■□□□ 1.33
SMARCD2-203ENST00000448276 ENOX1Q8TC92 643 aaKnown RBP23.34■■□□□ 1.33
SMARCD2-203ENST00000448276 APPBP2Q92624 585 aa23.34■■□□□ 1.33
SMARCD2-203ENST00000448276 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.34■■□□□ 1.33
SMARCD2-203ENST00000448276 CWC25Q9NXE8 425 aaPredicted RBP23.34■■□□□ 1.33
SMARCD2-203ENST00000448276 MORC3Q14149 939 aa23.34■■□□□ 1.33
SMARCD2-203ENST00000448276 SKIDA1Q1XH10 827 aa23.34■■□□□ 1.33
SMARCD2-203ENST00000448276 CMTR1Q8N1G2 835 aaKnown RBP23.34■■□□□ 1.33
SMARCD2-203ENST00000448276 IGSF22Q8N9C0 903 aa23.34■■□□□ 1.33
SMARCD2-203ENST00000448276 CCDC102AQ96A19 550 aa23.34■■□□□ 1.33
SMARCD2-203ENST00000448276 L1RE1Q9UN81 338 aa23.34■■□□□ 1.33
SMARCD2-203ENST00000448276 MYO1BO43795 1136 aa23.33■■□□□ 1.33
SMARCD2-203ENST00000448276 KIF5CO60282 957 aa23.33■■□□□ 1.33
SMARCD2-203ENST00000448276 SMYD4Q8IYR2 804 aaPredicted RBP23.33■■□□□ 1.33
SMARCD2-203ENST00000448276 RGS22Q8NE09 1264 aa23.33■■□□□ 1.33
SMARCD2-203ENST00000448276 FAM217BQ9NTX9 383 aaPredicted RBP23.33■■□□□ 1.33
SMARCD2-203ENST00000448276 NTRK3Q16288 839 aa23.33■■□□□ 1.33
SMARCD2-203ENST00000448276 NUTM2AQ8IVF1 878 aaPredicted RBP23.33■■□□□ 1.33
SMARCD2-203ENST00000448276 RNF216Q9NWF9 866 aaPredicted RBP23.33■■□□□ 1.33
SMARCD2-203ENST00000448276 C4AP0C0L4 1744 aa23.33■■□□□ 1.32
SMARCD2-203ENST00000448276 C4BP0C0L5 1744 aa23.33■■□□□ 1.32
SMARCD2-203ENST00000448276 GOLGA8AA7E2F4 631 aa23.32■■□□□ 1.32
SMARCD2-203ENST00000448276 MLKLQ8NB16 471 aa23.32■■□□□ 1.32
SMARCD2-203ENST00000448276 PCDHB6Q9Y5E3 794 aa23.32■■□□□ 1.32
SMARCD2-203ENST00000448276 A0A1B0GTH6 734 aa23.32■■□□□ 1.32
SMARCD2-203ENST00000448276 ZBTB43O43298 467 aa23.32■■□□□ 1.32
SMARCD2-203ENST00000448276 CASP14P31944 242 aa23.32■■□□□ 1.32
SMARCD2-203ENST00000448276 SARSP49591 514 aaKnown RBP23.32■■□□□ 1.32
SMARCD2-203ENST00000448276 PPFIBP1Q86W92 1011 aa23.32■■□□□ 1.32
SMARCD2-203ENST00000448276 NOA1Q8NC60 698 aaKnown RBP23.32■■□□□ 1.32
SMARCD2-203ENST00000448276 FBXO2Q9UK22 296 aaPredicted RBP23.32■■□□□ 1.32
SMARCD2-203ENST00000448276 AKAP2Q9Y2D5 859 aa23.32■■□□□ 1.32
SMARCD2-203ENST00000448276 CD44P16070 742 aaKnown RBP23.31■■□□□ 1.32
SMARCD2-203ENST00000448276 AFMP43652 599 aa23.31■■□□□ 1.32
SMARCD2-203ENST00000448276 NR5A1Q13285 461 aa23.31■■□□□ 1.32
SMARCD2-203ENST00000448276 RAB21Q9UL25 225 aa23.31■■□□□ 1.32
SMARCD2-203ENST00000448276 ZNF142P52746 1687 aaPredicted RBP23.31■■□□□ 1.32
SMARCD2-203ENST00000448276 CDKL5O76039 1030 aa23.31■■□□□ 1.32
SMARCD2-203ENST00000448276 CASP8Q14790 479 aa23.31■■□□□ 1.32
SMARCD2-203ENST00000448276 APTXQ7Z2E3 356 aaKnown RBP23.31■■□□□ 1.32
SMARCD2-203ENST00000448276 NOSTRINQ8IVI9 506 aa23.31■■□□□ 1.32
SMARCD2-203ENST00000448276 CEP112Q8N8E3 955 aa23.31■■□□□ 1.32
SMARCD2-203ENST00000448276 HNRNPLLQ8WVV9 542 aaKnown RBP23.31■■□□□ 1.32
SMARCD2-203ENST00000448276 A1BGP04217 495 aa23.3■■□□□ 1.32
SMARCD2-203ENST00000448276 NOP2P46087 812 aaKnown RBP23.3■■□□□ 1.32
SMARCD2-203ENST00000448276 PANX2Q96RD6 677 aa23.3■■□□□ 1.32
SMARCD2-203ENST00000448276 ARFGEF2Q9Y6D5 1785 aa23.3■■□□□ 1.32
SMARCD2-203ENST00000448276 LRRIQ3A6PVS8 624 aaPredicted RBP23.3■■□□□ 1.32
SMARCD2-203ENST00000448276 CDC25AP30304 524 aa23.3■■□□□ 1.32
SMARCD2-203ENST00000448276 MSANTD4Q8NCY6 345 aa23.3■■□□□ 1.32
SMARCD2-203ENST00000448276 USP5P45974 858 aa23.29■■□□□ 1.32
SMARCD2-203ENST00000448276 FXR1P51114 621 aaKnown RBP eCLIP23.29■■□□□ 1.32
SMARCD2-203ENST00000448276 NCAPH2Q6IBW4 605 aa23.29■■□□□ 1.32
SMARCD2-203ENST00000448276 CPLX2Q6PUV4 134 aaKnown RBP23.29■■□□□ 1.32
SMARCD2-203ENST00000448276 DIS3L2Q8IYB7 885 aaKnown RBP23.29■■□□□ 1.32
SMARCD2-203ENST00000448276 HOOK1Q9UJC3 728 aaKnown RBP23.29■■□□□ 1.32
SMARCD2-203ENST00000448276 CTAGE9A4FU28 777 aa23.29■■□□□ 1.32
SMARCD2-203ENST00000448276 CYP27B1O15528 508 aa23.29■■□□□ 1.32
SMARCD2-203ENST00000448276 ZFYP08048 801 aaPredicted RBP23.29■■□□□ 1.32
SMARCD2-203ENST00000448276 TATP17735 454 aaPredicted RBP23.28■■□□□ 1.32
SMARCD2-203ENST00000448276 PLCD1P51178 756 aa23.28■■□□□ 1.32
SMARCD2-203ENST00000448276 TMEM67Q5HYA8 995 aa23.28■■□□□ 1.32
SMARCD2-203ENST00000448276 IQUBQ8NA54 791 aa23.28■■□□□ 1.32
SMARCD2-203ENST00000448276 IGDCC4Q8TDY8 1250 aa23.28■■□□□ 1.32
SMARCD2-203ENST00000448276 RNF225M0QZC1 329 aaPredicted RBP23.28■■□□□ 1.32
SMARCD2-203ENST00000448276 ACTN4O43707 911 aaKnown RBP23.28■■□□□ 1.32
SMARCD2-203ENST00000448276 CCT6AP40227 531 aaKnown RBP23.28■■□□□ 1.32
SMARCD2-203ENST00000448276 NT5DC1Q5TFE4 455 aa23.28■■□□□ 1.32
SMARCD2-203ENST00000448276 CSRNP2Q9H175 543 aa23.28■■□□□ 1.32
SMARCD2-203ENST00000448276 ADAMTSL3P82987 1691 aa23.27■■□□□ 1.32
SMARCD2-203ENST00000448276 ERLIN1O75477 346 aa23.27■■□□□ 1.32
SMARCD2-203ENST00000448276 SSRP1Q08945 709 aaKnown RBP23.27■■□□□ 1.32
SMARCD2-203ENST00000448276 OXER1Q8TDS5 423 aa23.27■■□□□ 1.32
SMARCD2-203ENST00000448276 ZKSCAN3Q9BRR0 538 aa23.27■■□□□ 1.32
SMARCD2-203ENST00000448276 LY9Q9HBG7 655 aa23.27■■□□□ 1.32
SMARCD2-203ENST00000448276 A0A087X0B3 334 aa23.27■■□□□ 1.32
SMARCD2-203ENST00000448276 PTPREP23469 700 aa23.27■■□□□ 1.32
SMARCD2-203ENST00000448276 CCDC57Q2TAC2 916 aa23.27■■□□□ 1.32
SMARCD2-203ENST00000448276 IFNL2Q8IZJ0 200 aa23.27■■□□□ 1.32
SMARCD2-203ENST00000448276 STAMQ92783 540 aa23.27■■□□□ 1.32
SMARCD2-203ENST00000448276 DACH1Q9UI36 760 aa23.27■■□□□ 1.32
SMARCD2-203ENST00000448276 ZNF330Q9Y3S2 320 aaPredicted RBP23.27■■□□□ 1.32
SMARCD2-203ENST00000448276 PLEKHG2Q9H7P9 1386 aa23.26■■□□□ 1.31
SMARCD2-203ENST00000448276 MFAP3LO75121 409 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms