RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 ZCCHC2Q9C0B9 1178 aaKnown RBP5.02□□□□□ -1.61
PMS1-216ENST00000447734 EHMT1Q9H9B1 1298 aa5.02□□□□□ -1.61
PMS1-216ENST00000447734 TMEM39AQ9NV64 488 aa5.02□□□□□ -1.61
PMS1-216ENST00000447734 CYP8B1Q9UNU6 501 aa5.02□□□□□ -1.61
PMS1-216ENST00000447734 KCNH4Q9UQ05 1017 aa5.02□□□□□ -1.61
PMS1-216ENST00000447734 DYRK1BQ9Y463 629 aa5.02□□□□□ -1.61
PMS1-216ENST00000447734 SLC12A7Q9Y666 1083 aa5.02□□□□□ -1.61
PMS1-216ENST00000447734 IQCA1LA6NCM1 817 aa5.01□□□□□ -1.61
PMS1-216ENST00000447734 UPK3BL1B0FP48 263 aa5.01□□□□□ -1.61
PMS1-216ENST00000447734 UPK3BL2E5RIL1 263 aa5.01□□□□□ -1.61
PMS1-216ENST00000447734 PPFIA4O75335 1185 aa5.01□□□□□ -1.61
PMS1-216ENST00000447734 RFPL3O75679 317 aa5.01□□□□□ -1.61
PMS1-216ENST00000447734 PSAPP07602 524 aa5.01□□□□□ -1.61
PMS1-216ENST00000447734 CPEP16870 476 aa5.01□□□□□ -1.61
PMS1-216ENST00000447734 MX2P20592 715 aa5.01□□□□□ -1.61
PMS1-216ENST00000447734 GUCY2CP25092 1073 aa5.01□□□□□ -1.61
PMS1-216ENST00000447734 ZNF157P51786 506 aaPredicted RBP5.01□□□□□ -1.61
PMS1-216ENST00000447734 MCL1Q07820 350 aa5.01□□□□□ -1.61
PMS1-216ENST00000447734 CBX2Q14781 532 aaPredicted RBP5.01□□□□□ -1.61
PMS1-216ENST00000447734 NCAPHQ15003 741 aa5.01□□□□□ -1.61
PMS1-216ENST00000447734 LRRC14Q15048 493 aa5.01□□□□□ -1.61
PMS1-216ENST00000447734 LRRC41Q15345 812 aa5.01□□□□□ -1.61
PMS1-216ENST00000447734 AKAP4Q5JQC9 854 aa5.01□□□□□ -1.61
PMS1-216ENST00000447734 WDR44Q5JSH3 913 aa5.01□□□□□ -1.61
PMS1-216ENST00000447734 NLRP8Q86W28 1048 aa5.01□□□□□ -1.61
PMS1-216ENST00000447734 ZBTB38Q8NAP3 1195 aaPredicted RBP5.01□□□□□ -1.61
PMS1-216ENST00000447734 EVI5LQ96CN4 794 aa5.01□□□□□ -1.61
PMS1-216ENST00000447734 PNMA5Q96PV4 448 aa5.01□□□□□ -1.61
PMS1-216ENST00000447734 TM9SF2Q99805 663 aa5.01□□□□□ -1.61
PMS1-216ENST00000447734 KRTAP4-12Q9BQ66 201 aa5.01□□□□□ -1.61
PMS1-216ENST00000447734 BHLHE41Q9C0J9 482 aaPredicted RBP5.01□□□□□ -1.61
PMS1-216ENST00000447734 TIMMDC1Q9NPL8 285 aa5.01□□□□□ -1.61
PMS1-216ENST00000447734 MAPRE3Q9UPY8 281 aa5.01□□□□□ -1.61
PMS1-216ENST00000447734 ADCY3O60266 1144 aa5□□□□□ -1.61
PMS1-216ENST00000447734 GRIN3BO60391 1043 aa5□□□□□ -1.61
PMS1-216ENST00000447734 KATNA1O75449 491 aa5□□□□□ -1.61
PMS1-216ENST00000447734 ATE1O95260 518 aa5□□□□□ -1.61
PMS1-216ENST00000447734 LDHAP00338 332 aaKnown RBP5□□□□□ -1.61
PMS1-216ENST00000447734 BMP6P22004 513 aa5□□□□□ -1.61
PMS1-216ENST00000447734 NME2P22392 152 aa5□□□□□ -1.61
PMS1-216ENST00000447734 PAX3P23760 479 aa5□□□□□ -1.61
PMS1-216ENST00000447734 SOX18P35713 384 aa5□□□□□ -1.61
PMS1-216ENST00000447734 UBAP2LQ14157 1087 aaKnown RBP5□□□□□ -1.61
PMS1-216ENST00000447734 LRRFIP1Q32MZ4 808 aaKnown RBP5□□□□□ -1.61
PMS1-216ENST00000447734 SYCP2LQ5T4T6 812 aa5□□□□□ -1.61
PMS1-216ENST00000447734 COL13A1Q5TAT6 717 aaPredicted RBP5□□□□□ -1.61
PMS1-216ENST00000447734 SAMD5Q5TGI4 173 aa5□□□□□ -1.61
PMS1-216ENST00000447734 RASIP1Q5U651 963 aa5□□□□□ -1.61
PMS1-216ENST00000447734 LLGL2Q6P1M3 1020 aa5□□□□□ -1.61
PMS1-216ENST00000447734 VHLLQ6RSH7 139 aa5□□□□□ -1.61
PMS1-216ENST00000447734 LINC00114Q6XXX2 140 aa5□□□□□ -1.61
PMS1-216ENST00000447734 PDZRN4Q6ZMN7 1036 aaPredicted RBP5□□□□□ -1.61
PMS1-216ENST00000447734 MYO1HQ8N1T3 1032 aa5□□□□□ -1.61
PMS1-216ENST00000447734 AFAP1L2Q8N4X5 818 aa5□□□□□ -1.61
PMS1-216ENST00000447734 RIN3Q8TB24 985 aa5□□□□□ -1.61
PMS1-216ENST00000447734 TRERF1Q96PN7 1200 aa5□□□□□ -1.61
PMS1-216ENST00000447734 KIF2CQ99661 725 aa5□□□□□ -1.61
PMS1-216ENST00000447734 RUSC1Q9BVN2 902 aa5□□□□□ -1.61
PMS1-216ENST00000447734 CBX8Q9HC52 389 aa5□□□□□ -1.61
PMS1-216ENST00000447734 GSG1L2A8MUP6 293 aa4.99□□□□□ -1.61
PMS1-216ENST00000447734 PLD2O14939 933 aa4.99□□□□□ -1.61
PMS1-216ENST00000447734 SUSD5O60279 629 aa4.99□□□□□ -1.61
PMS1-216ENST00000447734 RAPGEF3O95398 923 aa4.99□□□□□ -1.61
PMS1-216ENST00000447734 NEK2P51955 445 aa4.99□□□□□ -1.61
PMS1-216ENST00000447734 KCNQ4P56696 695 aa4.99□□□□□ -1.61
PMS1-216ENST00000447734 IRX6P78412 446 aaPredicted RBP4.99□□□□□ -1.61
PMS1-216ENST00000447734 RPL6Q02878 288 aaKnown RBP4.99□□□□□ -1.61
PMS1-216ENST00000447734 PLAURQ03405 335 aa4.99□□□□□ -1.61
PMS1-216ENST00000447734 HLTFQ14527 1009 aaKnown RBP eCLIP4.99□□□□□ -1.616e-7■□□□□ 8.6
PMS1-216ENST00000447734 SLC10A6Q3KNW5 377 aa4.99□□□□□ -1.61
PMS1-216ENST00000447734 HSP90AB4PQ58FF6 505 aa4.99□□□□□ -1.61
PMS1-216ENST00000447734 CNNM4Q6P4Q7 775 aa4.99□□□□□ -1.61
PMS1-216ENST00000447734 FOXR1Q6PIV2 292 aa4.99□□□□□ -1.61
PMS1-216ENST00000447734 CHPFQ8IZ52 775 aa4.99□□□□□ -1.61
PMS1-216ENST00000447734 SAMD3Q8N6K7 520 aa4.99□□□□□ -1.61
PMS1-216ENST00000447734 CEP120Q8N960 986 aa4.99□□□□□ -1.61
PMS1-216ENST00000447734 TMEM102Q8N9M5 508 aaPredicted RBP4.99□□□□□ -1.61
PMS1-216ENST00000447734 NXPE3Q969Y0 559 aa4.99□□□□□ -1.61
PMS1-216ENST00000447734 HHIPQ96QV1 700 aa4.99□□□□□ -1.61
PMS1-216ENST00000447734 SMAD5Q99717 465 aaKnown RBP4.99□□□□□ -1.61
PMS1-216ENST00000447734 ASPSCR1Q9BZE9 553 aa4.99□□□□□ -1.61
PMS1-216ENST00000447734 GSX2Q9BZM3 304 aa4.99□□□□□ -1.61
PMS1-216ENST00000447734 EPN3Q9H201 632 aa4.99□□□□□ -1.61
PMS1-216ENST00000447734 CRISPLD1Q9H336 500 aa4.99□□□□□ -1.61
PMS1-216ENST00000447734 ANTXR1Q9H6X2 564 aa4.99□□□□□ -1.61
PMS1-216ENST00000447734 ARNT2Q9HBZ2 717 aa4.99□□□□□ -1.61
PMS1-216ENST00000447734 NCOA5Q9HCD5 579 aaKnown RBP4.99□□□□□ -1.61
PMS1-216ENST00000447734 GPAMQ9HCL2 828 aa4.99□□□□□ -1.61
PMS1-216ENST00000447734 TLR7Q9NYK1 1049 aaKnown RBP4.99□□□□□ -1.61
PMS1-216ENST00000447734 ZIM2Q9NZV7 527 aa4.99□□□□□ -1.61
PMS1-216ENST00000447734 POLR3KQ9Y2Y1 108 aaPredicted RBP4.99□□□□□ -1.61
PMS1-216ENST00000447734 MEIS3P2A8K0S8 358 aa4.98□□□□□ -1.61
PMS1-216ENST00000447734 H7C1W4 665 aa4.98□□□□□ -1.61
PMS1-216ENST00000447734 PDE2AO00408 941 aaPredicted RBP4.98□□□□□ -1.61
PMS1-216ENST00000447734 NFKB1P19838 968 aa4.98□□□□□ -1.61
PMS1-216ENST00000447734 L1CAMP32004 1257 aa4.98□□□□□ -1.61
PMS1-216ENST00000447734 RAB27AP51159 221 aa4.98□□□□□ -1.61
PMS1-216ENST00000447734 FNDC3BQ53EP0 1204 aaKnown RBP4.98□□□□□ -1.61
PMS1-216ENST00000447734 SPTY2D1Q68D10 685 aaPredicted RBP4.98□□□□□ -1.61
PMS1-216ENST00000447734 NECAB2Q7Z6G3 386 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms