RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.66■■□□□ 1.22
FAM3A-215ENST00000447601 GNL2Q13823 731 aaKnown RBP22.66■■□□□ 1.22
FAM3A-215ENST00000447601 STK38Q15208 465 aa22.66■■□□□ 1.22
FAM3A-215ENST00000447601 MYH15Q9Y2K3 1946 aa22.65■■□□□ 1.22
FAM3A-215ENST00000447601 LDHCP07864 332 aa22.65■■□□□ 1.22
FAM3A-215ENST00000447601 NT5C2P49902 561 aa22.65■■□□□ 1.22
FAM3A-215ENST00000447601 SF3A1Q15459 793 aaKnown RBP22.65■■□□□ 1.22
FAM3A-215ENST00000447601 NLGN1Q8N2Q7 840 aa22.65■■□□□ 1.22
FAM3A-215ENST00000447601 ENAHQ8N8S7 591 aaPredicted RBP22.65■■□□□ 1.22
FAM3A-215ENST00000447601 A0A1W2PQ27 194 aa22.64■■□□□ 1.22
FAM3A-215ENST00000447601 A0A1W2PQ64 194 aa22.64■■□□□ 1.22
FAM3A-215ENST00000447601 A0A1W2PQD8 194 aa22.64■■□□□ 1.22
FAM3A-215ENST00000447601 ESPNB1AK53 854 aa22.64■■□□□ 1.22
FAM3A-215ENST00000447601 SMIM22K7EJ46 135 aa22.64■■□□□ 1.22
FAM3A-215ENST00000447601 BAG3O95817 575 aa22.64■■□□□ 1.22
FAM3A-215ENST00000447601 IL1R1P14778 569 aa22.64■■□□□ 1.22
FAM3A-215ENST00000447601 IFIT1BQ5T764 474 aaKnown RBP22.64■■□□□ 1.22
FAM3A-215ENST00000447601 CERS3Q8IU89 383 aa22.64■■□□□ 1.22
FAM3A-215ENST00000447601 NUP133Q8WUM0 1156 aa22.64■■□□□ 1.22
FAM3A-215ENST00000447601 NOL10Q9BSC4 688 aaKnown RBP22.64■■□□□ 1.22
FAM3A-215ENST00000447601 CD209Q9NNX6 404 aa22.64■■□□□ 1.22
FAM3A-215ENST00000447601 CLIC4Q9Y696 253 aa22.64■■□□□ 1.22
FAM3A-215ENST00000447601 CTAGE5O15320 804 aa22.64■■□□□ 1.21
FAM3A-215ENST00000447601 PRDM1O75626 825 aa22.64■■□□□ 1.21
FAM3A-215ENST00000447601 DEXIO95424 95 aa22.64■■□□□ 1.21
FAM3A-215ENST00000447601 FAM160A1Q05DH4 1040 aa22.64■■□□□ 1.21
FAM3A-215ENST00000447601 TYRO3Q06418 890 aa22.64■■□□□ 1.21
FAM3A-215ENST00000447601 PDE4BQ07343 736 aa22.64■■□□□ 1.21
FAM3A-215ENST00000447601 ADALQ6DHV7 355 aa22.64■■□□□ 1.21
FAM3A-215ENST00000447601 CATIPQ7Z7H3 387 aa22.64■■□□□ 1.21
FAM3A-215ENST00000447601 CRACR2BQ8N4Y2 399 aaPredicted RBP22.64■■□□□ 1.21
FAM3A-215ENST00000447601 GPR101Q96P66 508 aaPredicted RBP22.64■■□□□ 1.21
FAM3A-215ENST00000447601 RRAGDQ9NQL2 400 aaPredicted RBP22.64■■□□□ 1.21
FAM3A-215ENST00000447601 PCDHA7Q9UN72 937 aa22.64■■□□□ 1.21
FAM3A-215ENST00000447601 SPTLC2O15270 562 aa22.63■■□□□ 1.21
FAM3A-215ENST00000447601 CALM1P0DP23 149 aa22.63■■□□□ 1.21
FAM3A-215ENST00000447601 CALM2P0DP24 149 aa22.63■■□□□ 1.21
FAM3A-215ENST00000447601 CALM3P0DP25 149 aa22.63■■□□□ 1.21
FAM3A-215ENST00000447601 U2AF2P26368 475 aaKnown RBP eCLIP22.63■■□□□ 1.21
FAM3A-215ENST00000447601 ANO1Q5XXA6 986 aa22.63■■□□□ 1.21
FAM3A-215ENST00000447601 NBPF11Q86T75 865 aa22.63■■□□□ 1.21
FAM3A-215ENST00000447601 CKAP2LQ8IYA6 745 aa22.63■■□□□ 1.21
FAM3A-215ENST00000447601 MRPS27Q92552 414 aaKnown RBP22.63■■□□□ 1.21
FAM3A-215ENST00000447601 AKT1S1Q96B36 256 aa22.63■■□□□ 1.21
FAM3A-215ENST00000447601 ZNF827Q17R98 1081 aa22.62■■□□□ 1.21
FAM3A-215ENST00000447601 FSIP1Q8NA03 581 aa22.62■■□□□ 1.21
FAM3A-215ENST00000447601 FLAD1Q8NFF5 587 aa22.62■■□□□ 1.21
FAM3A-215ENST00000447601 GOLPH3LQ9H4A5 285 aa22.62■■□□□ 1.21
FAM3A-215ENST00000447601 MCM9Q9NXL9 1143 aa22.62■■□□□ 1.21
FAM3A-215ENST00000447601 KINO60870 393 aaKnown RBP22.61■■□□□ 1.21
FAM3A-215ENST00000447601 APBA3O96018 575 aa22.61■■□□□ 1.21
FAM3A-215ENST00000447601 USP5P45974 858 aa22.61■■□□□ 1.21
FAM3A-215ENST00000447601 PPP4CP60510 307 aa22.61■■□□□ 1.21
FAM3A-215ENST00000447601 SAFBQ15424 915 aaKnown RBP eCLIP22.61■■□□□ 1.21
FAM3A-215ENST00000447601 SASS6Q6UVJ0 657 aa22.61■■□□□ 1.21
FAM3A-215ENST00000447601 TBC1D16Q8TBP0 767 aa22.61■■□□□ 1.21
FAM3A-215ENST00000447601 RBM28Q9NW13 759 aaKnown RBP22.61■■□□□ 1.21
FAM3A-215ENST00000447601 MROH7-TTC4A0A0A0MT08 1334 aa22.61■■□□□ 1.21
FAM3A-215ENST00000447601 PPEF1O14829 653 aaPredicted RBP22.61■■□□□ 1.21
FAM3A-215ENST00000447601 DDAH1O94760 285 aa22.61■■□□□ 1.21
FAM3A-215ENST00000447601 ENGASEQ8NFI3 743 aa22.61■■□□□ 1.21
FAM3A-215ENST00000447601 FAM200AQ8TCP9 573 aa22.61■■□□□ 1.21
FAM3A-215ENST00000447601 RNF26Q9BY78 433 aaPredicted RBP22.61■■□□□ 1.21
FAM3A-215ENST00000447601 MRVI1Q9Y6F6 885 aa22.61■■□□□ 1.21
FAM3A-215ENST00000447601 KIAA1551Q9HCM1 1747 aa22.6■■□□□ 1.21
FAM3A-215ENST00000447601 SNW1Q13573 536 aaKnown RBP22.6■■□□□ 1.21
FAM3A-215ENST00000447601 SP8Q8IXZ3 490 aa22.6■■□□□ 1.21
FAM3A-215ENST00000447601 AMOTL1Q8IY63 956 aa22.6■■□□□ 1.21
FAM3A-215ENST00000447601 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.6■■□□□ 1.21
FAM3A-215ENST00000447601 POLLQ9UGP5 575 aa22.6■■□□□ 1.21
FAM3A-215ENST00000447601 MKRN1Q9UHC7 482 aaKnown RBP22.6■■□□□ 1.21
FAM3A-215ENST00000447601 MMP1P03956 469 aa22.59■■□□□ 1.21
FAM3A-215ENST00000447601 CYP2D6P10635 497 aa22.59■■□□□ 1.21
FAM3A-215ENST00000447601 DIXDC1Q155Q3 683 aa22.59■■□□□ 1.21
FAM3A-215ENST00000447601 COL23A1Q86Y22 540 aaPredicted RBP22.59■■□□□ 1.21
FAM3A-215ENST00000447601 SH3RF3Q8TEJ3 882 aaPredicted RBP22.59■■□□□ 1.21
FAM3A-215ENST00000447601 TBC1D22AQ8WUA7 517 aa22.59■■□□□ 1.21
FAM3A-215ENST00000447601 GUCY1A2P33402 732 aa22.59■■□□□ 1.21
FAM3A-215ENST00000447601 AKAP17AQ02040 695 aaKnown RBP22.59■■□□□ 1.21
FAM3A-215ENST00000447601 SLC39A14Q15043 492 aa22.59■■□□□ 1.21
FAM3A-215ENST00000447601 ZSCAN30Q86W11 494 aa22.59■■□□□ 1.21
FAM3A-215ENST00000447601 JMYQ8N9B5 988 aa22.59■■□□□ 1.21
FAM3A-215ENST00000447601 FBXO41Q8TF61 875 aa22.59■■□□□ 1.21
FAM3A-215ENST00000447601 CCDC88AQ3V6T2 1871 aa22.58■■□□□ 1.21
FAM3A-215ENST00000447601 C6orf229H3BNL8 230 aa22.58■■□□□ 1.21
FAM3A-215ENST00000447601 CAVIN2O95810 425 aa22.58■■□□□ 1.21
FAM3A-215ENST00000447601 GRIK5Q16478 980 aa22.58■■□□□ 1.21
FAM3A-215ENST00000447601 C12orf60Q5U649 245 aa22.58■■□□□ 1.21
FAM3A-215ENST00000447601 CCDC39Q9UFE4 941 aa22.58■■□□□ 1.21
FAM3A-215ENST00000447601 USP25Q9UHP3 1055 aa22.58■■□□□ 1.21
FAM3A-215ENST00000447601 ATP6V0A2Q9Y487 856 aa22.58■■□□□ 1.21
FAM3A-215ENST00000447601 ROBO3Q96MS0 1386 aa22.58■■□□□ 1.2
FAM3A-215ENST00000447601 UBE2Q2LH0YL09 131 aa22.57■■□□□ 1.2
FAM3A-215ENST00000447601 USP17L8P0C7I0 530 aa22.57■■□□□ 1.2
FAM3A-215ENST00000447601 TROAPQ12815 778 aa22.57■■□□□ 1.2
FAM3A-215ENST00000447601 NOSTRINQ8IVI9 506 aa22.57■■□□□ 1.2
FAM3A-215ENST00000447601 SLF2Q8IX21 1173 aa22.57■■□□□ 1.2
FAM3A-215ENST00000447601 CCDC82Q8N4S0 544 aa22.57■■□□□ 1.2
FAM3A-215ENST00000447601 RTFDC1Q9BY42 306 aaPredicted RBP22.57■■□□□ 1.2
FAM3A-215ENST00000447601 FOXP1Q9H334 677 aaPredicted RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms