RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 PIH1D3Q9NQM4 214 aaKnown RBP22.31■■□□□ 1.16
COL9A1-205ENST00000447041 GNRH1P01148 92 aa22.3■■□□□ 1.16
COL9A1-205ENST00000447041 EN2P19622 333 aaPredicted RBP22.3■■□□□ 1.16
COL9A1-205ENST00000447041 PSMC4P43686 418 aa22.3■■□□□ 1.16
COL9A1-205ENST00000447041 FASTKD5Q7L8L6 764 aaKnown RBP22.3■■□□□ 1.16
COL9A1-205ENST00000447041 EXOC6BQ9Y2D4 811 aa22.3■■□□□ 1.16
COL9A1-205ENST00000447041 MGAMO43451 1857 aa22.3■■□□□ 1.16
COL9A1-205ENST00000447041 LOC285556D6RIA3 1793 aa22.3■■□□□ 1.16
COL9A1-205ENST00000447041 MYCP01106 439 aaPredicted RBP22.29■■□□□ 1.16
COL9A1-205ENST00000447041 BCRP11274 1271 aa22.29■■□□□ 1.16
COL9A1-205ENST00000447041 RRP1BQ14684 758 aaKnown RBP22.29■■□□□ 1.16
COL9A1-205ENST00000447041 NBPF11Q86T75 865 aa22.29■■□□□ 1.16
COL9A1-205ENST00000447041 BAG3O95817 575 aa22.28■■□□□ 1.16
COL9A1-205ENST00000447041 OSBPP22059 807 aa22.28■■□□□ 1.16
COL9A1-205ENST00000447041 TMEM106CQ9BVX2 250 aa22.28■■□□□ 1.16
COL9A1-205ENST00000447041 NDUFB9Q9Y6M9 179 aa22.28■■□□□ 1.16
COL9A1-205ENST00000447041 FLT1P17948 1338 aa22.28■■□□□ 1.16
COL9A1-205ENST00000447041 FMNL1O95466 1100 aaPredicted RBP22.27■■□□□ 1.16
COL9A1-205ENST00000447041 PRMT2P55345 433 aa22.27■■□□□ 1.16
COL9A1-205ENST00000447041 MAPKAPK5Q8IW41 473 aa22.27■■□□□ 1.16
COL9A1-205ENST00000447041 TGFBRAP1Q8WUH2 860 aa22.27■■□□□ 1.16
COL9A1-205ENST00000447041 SRRDQ9UH36 339 aa22.27■■□□□ 1.16
COL9A1-205ENST00000447041 PLCG2P16885 1265 aa22.26■■□□□ 1.15
COL9A1-205ENST00000447041 PPP4CP60510 307 aa22.26■■□□□ 1.15
COL9A1-205ENST00000447041 SLC45A1Q9Y2W3 748 aa22.26■■□□□ 1.15
COL9A1-205ENST00000447041 MYPNQ86TC9 1320 aa22.26■■□□□ 1.15
COL9A1-205ENST00000447041 KIAA0100Q14667 2235 aaKnown RBP22.26■■□□□ 1.15
COL9A1-205ENST00000447041 SLC34A2O95436 690 aa22.25■■□□□ 1.15
COL9A1-205ENST00000447041 CAP2P40123 477 aa22.25■■□□□ 1.15
COL9A1-205ENST00000447041 DYNLL1P63167 89 aaKnown RBP22.25■■□□□ 1.15
COL9A1-205ENST00000447041 SLC4A8Q2Y0W8 1093 aa22.25■■□□□ 1.15
COL9A1-205ENST00000447041 TREML2Q5T2D2 321 aa22.25■■□□□ 1.15
COL9A1-205ENST00000447041 DNAJC18Q9H819 358 aa22.25■■□□□ 1.15
COL9A1-205ENST00000447041 HERC5Q9UII4 1024 aaKnown RBP22.25■■□□□ 1.15
COL9A1-205ENST00000447041 AGTPBP1Q9UPW5 1226 aa22.25■■□□□ 1.15
COL9A1-205ENST00000447041 IDH1O75874 414 aaKnown RBP22.24■■□□□ 1.15
COL9A1-205ENST00000447041 FCGRTP55899 365 aa22.24■■□□□ 1.15
COL9A1-205ENST00000447041 SPP2Q13103 211 aa22.24■■□□□ 1.15
COL9A1-205ENST00000447041 AACSQ86V21 672 aa22.24■■□□□ 1.15
COL9A1-205ENST00000447041 ERC1Q8IUD2 1116 aa22.24■■□□□ 1.15
COL9A1-205ENST00000447041 DHX36Q9H2U1 1008 aaKnown RBP22.24■■□□□ 1.15
COL9A1-205ENST00000447041 ANTXR1Q9H6X2 564 aa22.24■■□□□ 1.15
COL9A1-205ENST00000447041 PI4KBQ9UBF8 816 aa22.24■■□□□ 1.15
COL9A1-205ENST00000447041 CYP7A1P22680 504 aa22.23■■□□□ 1.15
COL9A1-205ENST00000447041 HOXD10P28358 340 aa22.23■■□□□ 1.15
COL9A1-205ENST00000447041 PRKCZQ05513 592 aa22.23■■□□□ 1.15
COL9A1-205ENST00000447041 ZNF280CQ8ND82 737 aa22.23■■□□□ 1.15
COL9A1-205ENST00000447041 RAET1EQ8TD07 263 aa22.23■■□□□ 1.15
COL9A1-205ENST00000447041 SMCR8Q8TEV9 937 aaPredicted RBP22.23■■□□□ 1.15
COL9A1-205ENST00000447041 IL1RAPL2Q9NP60 686 aa22.23■■□□□ 1.15
COL9A1-205ENST00000447041 COG6Q9Y2V7 657 aa22.23■■□□□ 1.15
COL9A1-205ENST00000447041 IGSF3O75054 1194 aa22.22■■□□□ 1.15
COL9A1-205ENST00000447041 MTFR1Q15390 333 aa22.22■■□□□ 1.15
COL9A1-205ENST00000447041 MIGA1Q8NAN2 632 aa22.22■■□□□ 1.15
COL9A1-205ENST00000447041 PROCA1Q8NCQ7 364 aaPredicted RBP22.22■■□□□ 1.15
COL9A1-205ENST00000447041 SAP30BPQ9UHR5 308 aaKnown RBP22.22■■□□□ 1.15
COL9A1-205ENST00000447041 PALD1Q9ULE6 856 aa22.22■■□□□ 1.15
COL9A1-205ENST00000447041 GABRQQ9UN88 632 aa22.22■■□□□ 1.15
COL9A1-205ENST00000447041 USP17L5A8MUK1 530 aa22.21■■□□□ 1.15
COL9A1-205ENST00000447041 MS4A1P11836 297 aa22.21■■□□□ 1.15
COL9A1-205ENST00000447041 GRK4P32298 578 aa22.21■■□□□ 1.15
COL9A1-205ENST00000447041 HMGCS2P54868 508 aa22.21■■□□□ 1.15
COL9A1-205ENST00000447041 JAG1P78504 1218 aa22.21■■□□□ 1.15
COL9A1-205ENST00000447041 SHROOM1Q2M3G4 852 aaPredicted RBP22.21■■□□□ 1.15
COL9A1-205ENST00000447041 MAGEB6Q8N7X4 407 aa22.21■■□□□ 1.15
COL9A1-205ENST00000447041 RHPN1Q8TCX5 695 aa22.21■■□□□ 1.15
COL9A1-205ENST00000447041 TBC1D2Q9BYX2 928 aa22.21■■□□□ 1.15
COL9A1-205ENST00000447041 MYH1P12882 1939 aa22.21■■□□□ 1.15
COL9A1-205ENST00000447041 METTL16Q86W50 562 aaKnown RBP22.2■■□□□ 1.14
COL9A1-205ENST00000447041 ANKRD13CQ8N6S4 541 aa22.2■■□□□ 1.14
COL9A1-205ENST00000447041 DDX60LQ5H9U9 1706 aaKnown RBP22.2■■□□□ 1.14
COL9A1-205ENST00000447041 APBB1O00213 710 aa22.19■■□□□ 1.14
COL9A1-205ENST00000447041 GDF11O95390 407 aa22.19■■□□□ 1.14
COL9A1-205ENST00000447041 HSP90AB4PQ58FF6 505 aa22.19■■□□□ 1.14
COL9A1-205ENST00000447041 SIRT2Q8IXJ6 389 aa22.19■■□□□ 1.14
COL9A1-205ENST00000447041 CRACR2BQ8N4Y2 399 aaPredicted RBP22.19■■□□□ 1.14
COL9A1-205ENST00000447041 AS3MTQ9HBK9 375 aa22.19■■□□□ 1.14
COL9A1-205ENST00000447041 ZBTB40Q9NUA8 1239 aa22.19■■□□□ 1.14
COL9A1-205ENST00000447041 PNMA3Q9UL41 463 aa22.19■■□□□ 1.14
COL9A1-205ENST00000447041 DDX19BQ9UMR2 479 aa22.19■■□□□ 1.14
COL9A1-205ENST00000447041 TRIM34Q9BYJ4 488 aa22.18■■□□□ 1.14
COL9A1-205ENST00000447041 TNPO2O14787 897 aaKnown RBP22.17■■□□□ 1.14
COL9A1-205ENST00000447041 HLA-DOAP06340 250 aa22.17■■□□□ 1.14
COL9A1-205ENST00000447041 ASNSP08243 561 aa22.17■■□□□ 1.14
COL9A1-205ENST00000447041 MAP3K12Q12852 859 aa22.17■■□□□ 1.14
COL9A1-205ENST00000447041 MTMR2Q13614 643 aa22.17■■□□□ 1.14
COL9A1-205ENST00000447041 SH3D19Q5HYK7 790 aa22.17■■□□□ 1.14
COL9A1-205ENST00000447041 FOXP4Q8IVH2 680 aaPredicted RBP22.17■■□□□ 1.14
COL9A1-205ENST00000447041 RPAP2Q8IXW5 612 aaPredicted RBP22.17■■□□□ 1.14
COL9A1-205ENST00000447041 SHISA4Q96DD7 197 aa22.17■■□□□ 1.14
COL9A1-205ENST00000447041 NAV1Q8NEY1 1877 aa22.17■■□□□ 1.14
COL9A1-205ENST00000447041 USP5P45974 858 aa22.16■■□□□ 1.14
COL9A1-205ENST00000447041 FAM110CQ1W6H9 321 aa22.16■■□□□ 1.14
COL9A1-205ENST00000447041 KIF1BPQ96EK5 621 aa22.16■■□□□ 1.14
COL9A1-205ENST00000447041 WDR18Q9BV38 432 aa22.16■■□□□ 1.14
COL9A1-205ENST00000447041 BCL11AQ9H165 835 aa22.16■■□□□ 1.14
COL9A1-205ENST00000447041 RCAN3Q9UKA8 241 aa22.16■■□□□ 1.14
COL9A1-205ENST00000447041 ZBTB21Q9ULJ3 1066 aa22.16■■□□□ 1.14
COL9A1-205ENST00000447041 HMMRO75330 724 aa22.15■■□□□ 1.14
COL9A1-205ENST00000447041 FLT3LGP49771 235 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms