RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 IRF6O14896 467 aa17.93■□□□□ 0.46
HDAC4-204ENST00000446876 ERC2O15083 957 aa17.93■□□□□ 0.46
HDAC4-204ENST00000446876 MBD4O95243 580 aa17.93■□□□□ 0.46
HDAC4-204ENST00000446876 TBC1D8O95759 1140 aa17.93■□□□□ 0.46
HDAC4-204ENST00000446876 RRP1BQ14684 758 aaKnown RBP17.93■□□□□ 0.46
HDAC4-204ENST00000446876 CCDC84Q86UT8 332 aaPredicted RBP17.93■□□□□ 0.46
HDAC4-204ENST00000446876 IFNL1Q8IU54 200 aa17.93■□□□□ 0.46
HDAC4-204ENST00000446876 CERS3Q8IU89 383 aa17.93■□□□□ 0.46
HDAC4-204ENST00000446876 KBTBD3Q8NAB2 608 aa17.93■□□□□ 0.46
HDAC4-204ENST00000446876 SDR42E1Q8WUS8 393 aa17.93■□□□□ 0.46
HDAC4-204ENST00000446876 MS4A4AQ96JQ5 239 aa17.93■□□□□ 0.46
HDAC4-204ENST00000446876 DNAJC18Q9H819 358 aa17.93■□□□□ 0.46
HDAC4-204ENST00000446876 CCL15-CCL14A0A0B4J2E2 113 aa17.92■□□□□ 0.46
HDAC4-204ENST00000446876 PRKAB2O43741 272 aa17.92■□□□□ 0.46
HDAC4-204ENST00000446876 TBC1D12O60347 775 aa17.92■□□□□ 0.46
HDAC4-204ENST00000446876 GLRX3O76003 335 aaKnown RBP17.92■□□□□ 0.46
HDAC4-204ENST00000446876 PPIL2Q13356 520 aa17.92■□□□□ 0.46
HDAC4-204ENST00000446876 UBE3CQ15386 1083 aa17.92■□□□□ 0.46
HDAC4-204ENST00000446876 CCL15Q16663 113 aa17.92■□□□□ 0.46
HDAC4-204ENST00000446876 SCYL3Q8IZE3 742 aa17.92■□□□□ 0.46
HDAC4-204ENST00000446876 BRI3BPQ8WY22 251 aa17.92■□□□□ 0.46
HDAC4-204ENST00000446876 PTPN18Q99952 460 aa17.92■□□□□ 0.46
HDAC4-204ENST00000446876 CRNKL1Q9BZJ0 848 aaKnown RBP17.92■□□□□ 0.46
HDAC4-204ENST00000446876 DHX36Q9H2U1 1008 aaKnown RBP17.92■□□□□ 0.46
HDAC4-204ENST00000446876 R3HDMLQ9H3Y0 253 aa17.92■□□□□ 0.46
HDAC4-204ENST00000446876 PI4KBQ9UBF8 816 aa17.92■□□□□ 0.46
HDAC4-204ENST00000446876 PTPRFP10586 1907 aa17.92■□□□□ 0.46
HDAC4-204ENST00000446876 PDE1AP54750 535 aa17.91■□□□□ 0.46
HDAC4-204ENST00000446876 EVX2Q03828 476 aa17.91■□□□□ 0.46
HDAC4-204ENST00000446876 PPATQ06203 517 aa17.91■□□□□ 0.46
HDAC4-204ENST00000446876 PUS7LQ9H0K6 701 aaKnown RBP17.91■□□□□ 0.46
HDAC4-204ENST00000446876 TESPA1A2RU30 521 aaPredicted RBP17.9■□□□□ 0.46
HDAC4-204ENST00000446876 CTNND1O60716 968 aaKnown RBP17.9■□□□□ 0.46
HDAC4-204ENST00000446876 HLA-DOAP06340 250 aa17.9■□□□□ 0.46
HDAC4-204ENST00000446876 PTPRAP18433 802 aa17.9■□□□□ 0.46
HDAC4-204ENST00000446876 GTF2A2P52657 109 aa17.9■□□□□ 0.46
HDAC4-204ENST00000446876 NUCB1Q02818 461 aa17.9■□□□□ 0.46
HDAC4-204ENST00000446876 SHROOM1Q2M3G4 852 aaPredicted RBP17.9■□□□□ 0.46
HDAC4-204ENST00000446876 ZSCAN25Q6NSZ9 544 aa17.9■□□□□ 0.46
HDAC4-204ENST00000446876 CHD1LQ86WJ1 897 aa17.9■□□□□ 0.46
HDAC4-204ENST00000446876 CRACR2BQ8N4Y2 399 aaPredicted RBP17.9■□□□□ 0.46
HDAC4-204ENST00000446876 PICK1Q9NRD5 415 aa17.9■□□□□ 0.46
HDAC4-204ENST00000446876 STAP2Q9UGK3 403 aa17.9■□□□□ 0.46
HDAC4-204ENST00000446876 HERC5Q9UII4 1024 aaKnown RBP17.9■□□□□ 0.46
HDAC4-204ENST00000446876 RNF113AO15541 343 aaKnown RBP17.89■□□□□ 0.45
HDAC4-204ENST00000446876 INHBEP58166 350 aa17.89■□□□□ 0.45
HDAC4-204ENST00000446876 SNAPC2Q13487 334 aa17.89■□□□□ 0.45
HDAC4-204ENST00000446876 FSD1Q9BTV5 496 aa17.89■□□□□ 0.45
HDAC4-204ENST00000446876 TRIM34Q9BYJ4 488 aa17.89■□□□□ 0.45
HDAC4-204ENST00000446876 DCP1AQ9NPI6 582 aaPredicted RBP17.89■□□□□ 0.45
HDAC4-204ENST00000446876 ZHX2Q9Y6X8 837 aa17.89■□□□□ 0.45
HDAC4-204ENST00000446876 CYP2D6P10635 497 aa17.88■□□□□ 0.45
HDAC4-204ENST00000446876 PLCD1P51178 756 aa17.88■□□□□ 0.45
HDAC4-204ENST00000446876 JAG1P78504 1218 aa17.88■□□□□ 0.45
HDAC4-204ENST00000446876 METTL16Q86W50 562 aaKnown RBP17.88■□□□□ 0.45
HDAC4-204ENST00000446876 FAM43AQ8N2R8 423 aa17.88■□□□□ 0.45
HDAC4-204ENST00000446876 OSBP2Q969R2 916 aa17.88■□□□□ 0.45
HDAC4-204ENST00000446876 MCM9Q9NXL9 1143 aa17.88■□□□□ 0.45
HDAC4-204ENST00000446876 KCNH4Q9UQ05 1017 aa17.88■□□□□ 0.45
HDAC4-204ENST00000446876 MYH8P13535 1937 aa17.88■□□□□ 0.45
HDAC4-204ENST00000446876 M0R2C6 588 aa17.87■□□□□ 0.45
HDAC4-204ENST00000446876 GDF11O95390 407 aa17.87■□□□□ 0.45
HDAC4-204ENST00000446876 POLR3DP05423 398 aaPredicted RBP17.87■□□□□ 0.45
HDAC4-204ENST00000446876 CETPP11597 493 aa17.87■□□□□ 0.45
HDAC4-204ENST00000446876 CAP2P40123 477 aa17.87■□□□□ 0.45
HDAC4-204ENST00000446876 FOXP4Q8IVH2 680 aaPredicted RBP17.87■□□□□ 0.45
HDAC4-204ENST00000446876 TNS4Q8IZW8 715 aa17.87■□□□□ 0.45
HDAC4-204ENST00000446876 APPBP2Q92624 585 aa17.87■□□□□ 0.45
HDAC4-204ENST00000446876 SLC4A4Q9Y6R1 1079 aa17.87■□□□□ 0.45
HDAC4-204ENST00000446876 BTBD19C9JJ37 291 aa17.86■□□□□ 0.45
HDAC4-204ENST00000446876 SMIM22K7EJ46 135 aa17.86■□□□□ 0.45
HDAC4-204ENST00000446876 ALDH1A1P00352 501 aa17.86■□□□□ 0.45
HDAC4-204ENST00000446876 CRHR2Q13324 411 aa17.86■□□□□ 0.45
HDAC4-204ENST00000446876 PLEKHM2Q8IWE5 1019 aa17.86■□□□□ 0.45
HDAC4-204ENST00000446876 SEC62Q99442 399 aaKnown RBP17.86■□□□□ 0.45
HDAC4-204ENST00000446876 SERPINB13Q9UIV8 391 aa17.86■□□□□ 0.45
HDAC4-204ENST00000446876 AFG3L2Q9Y4W6 797 aa17.86■□□□□ 0.45
HDAC4-204ENST00000446876 CYP2D7A0A087X1C5 515 aa17.85■□□□□ 0.45
HDAC4-204ENST00000446876 TRIM75PA6NK02 468 aa17.85■□□□□ 0.45
HDAC4-204ENST00000446876 ZFYP08048 801 aaPredicted RBP17.85■□□□□ 0.45
HDAC4-204ENST00000446876 MOGSQ13724 837 aa17.85■□□□□ 0.45
HDAC4-204ENST00000446876 OTUD7BQ6GQQ9 843 aa17.85■□□□□ 0.45
HDAC4-204ENST00000446876 TTC6Q86TZ1 520 aa17.85■□□□□ 0.45
HDAC4-204ENST00000446876 STRBPQ96SI9 672 aaKnown RBP17.85■□□□□ 0.45
HDAC4-204ENST00000446876 EHD4Q9H223 541 aa17.85■□□□□ 0.45
HDAC4-204ENST00000446876 GPR25O00155 361 aa17.84■□□□□ 0.45
HDAC4-204ENST00000446876 TAF1CQ15572 869 aaPredicted RBP17.84■□□□□ 0.45
HDAC4-204ENST00000446876 ZNF296Q8WUU4 475 aaPredicted RBP17.84■□□□□ 0.45
HDAC4-204ENST00000446876 CFHR5Q9BXR6 569 aa17.84■□□□□ 0.45
HDAC4-204ENST00000446876 ATP8A2Q9NTI2 1148 aa17.84■□□□□ 0.45
HDAC4-204ENST00000446876 LOC285556D6RIA3 1793 aa17.84■□□□□ 0.45
HDAC4-204ENST00000446876 A0A0G2JLL6 359 aaPredicted RBP17.83■□□□□ 0.44
HDAC4-204ENST00000446876 CXCL11O14625 94 aa17.83■□□□□ 0.44
HDAC4-204ENST00000446876 GPAA1O43292 621 aa17.83■□□□□ 0.44
HDAC4-204ENST00000446876 PDE4AP27815 886 aa17.83■□□□□ 0.44
HDAC4-204ENST00000446876 SHMT1P34896 483 aa17.83■□□□□ 0.44
HDAC4-204ENST00000446876 DGKZQ13574 1117 aa17.83■□□□□ 0.44
HDAC4-204ENST00000446876 ZMYM1Q5SVZ6 1142 aa17.83■□□□□ 0.44
HDAC4-204ENST00000446876 GADL1Q6ZQY3 521 aa17.83■□□□□ 0.44
HDAC4-204ENST00000446876 PRRT2Q7Z6L0 340 aaPredicted RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms