RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 DCTPP1Q9H773 170 aa13.1□□□□□ -0.31
FN1-212ENST00000446046 TMEM2Q9UHN6 1383 aa13.09□□□□□ -0.31
FN1-212ENST00000446046 CWF19L2Q2TBE0 894 aaKnown RBP13.09□□□□□ -0.31
FN1-212ENST00000446046 LETM2Q2VYF4 491 aa13.09□□□□□ -0.31
FN1-212ENST00000446046 ARHGEF16Q5VV41 709 aa13.09□□□□□ -0.31
FN1-212ENST00000446046 CEP85Q6P2H3 762 aa13.09□□□□□ -0.31
FN1-212ENST00000446046 ANKARQ7Z5J8 1434 aa13.09□□□□□ -0.31
FN1-212ENST00000446046 HCLS1P14317 486 aaPredicted RBP13.09□□□□□ -0.31
FN1-212ENST00000446046 MARCKSP29966 332 aaPredicted RBP13.09□□□□□ -0.31
FN1-212ENST00000446046 GNG11P61952 73 aa13.09□□□□□ -0.31
FN1-212ENST00000446046 CCDC26Q8TAB7 109 aa13.09□□□□□ -0.31
FN1-212ENST00000446046 NT5C3AQ9H0P0 336 aa13.09□□□□□ -0.31
FN1-212ENST00000446046 MKRN1Q9UHC7 482 aaKnown RBP13.09□□□□□ -0.31
FN1-212ENST00000446046 OPA1O60313 960 aa13.09□□□□□ -0.31
FN1-212ENST00000446046 GNA14O95837 355 aa13.09□□□□□ -0.31
FN1-212ENST00000446046 NUP58Q9BVL2 599 aa13.09□□□□□ -0.31
FN1-212ENST00000446046 MUM1L1Q5H9M0 696 aa13.09□□□□□ -0.31
FN1-212ENST00000446046 ANAPC4Q9UJX5 808 aa13.09□□□□□ -0.31
FN1-212ENST00000446046 ERBB4Q15303 1308 aa13.09□□□□□ -0.31
FN1-212ENST00000446046 ADCY7P51828 1080 aa13.09□□□□□ -0.31
FN1-212ENST00000446046 GCKRQ14397 625 aa13.09□□□□□ -0.31
FN1-212ENST00000446046 PPP1R7Q15435 360 aa13.09□□□□□ -0.31
FN1-212ENST00000446046 SLC17A8Q8NDX2 589 aa13.09□□□□□ -0.31
FN1-212ENST00000446046 TSHZ3Q63HK5 1081 aa13.08□□□□□ -0.31
FN1-212ENST00000446046 ZKSCAN3Q9BRR0 538 aa13.08□□□□□ -0.31
FN1-212ENST00000446046 MFSD14BQ5SR56 506 aa13.08□□□□□ -0.32
FN1-212ENST00000446046 GOLGA5Q8TBA6 731 aa13.08□□□□□ -0.32
FN1-212ENST00000446046 IQCDQ96DY2 449 aa13.08□□□□□ -0.32
FN1-212ENST00000446046 SMC6Q96SB8 1091 aa13.08□□□□□ -0.32
FN1-212ENST00000446046 WDR17Q8IZU2 1322 aa13.08□□□□□ -0.32
FN1-212ENST00000446046 PKNOX2Q96KN3 472 aa13.08□□□□□ -0.32
FN1-212ENST00000446046 QTRT2Q9H974 415 aaKnown RBP13.08□□□□□ -0.32
FN1-212ENST00000446046 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.08□□□□□ -0.324e-6■■■□□ 15.9
FN1-212ENST00000446046 FCHSD1Q86WN1 690 aa13.08□□□□□ -0.32
FN1-212ENST00000446046 TRIM7Q9C029 511 aa13.08□□□□□ -0.32
FN1-212ENST00000446046 TTF2Q9UNY4 1162 aaKnown RBP13.08□□□□□ -0.32
FN1-212ENST00000446046 BCS1LQ9Y276 419 aa13.08□□□□□ -0.32
FN1-212ENST00000446046 SLFN12Q8IYM2 578 aa13.08□□□□□ -0.32
FN1-212ENST00000446046 XAGE2Q96GT9 111 aa13.08□□□□□ -0.32
FN1-212ENST00000446046 MRPL11Q9Y3B7 192 aaKnown RBP13.08□□□□□ -0.32
FN1-212ENST00000446046 ARHGEF37A1IGU5 675 aa13.08□□□□□ -0.32
FN1-212ENST00000446046 CRCPO75575 148 aa13.08□□□□□ -0.32
FN1-212ENST00000446046 PRPF6O94906 941 aaKnown RBP13.08□□□□□ -0.32
FN1-212ENST00000446046 ATF7P17544 494 aaPredicted RBP13.08□□□□□ -0.32
FN1-212ENST00000446046 RPS8P62241 208 aaKnown RBP13.08□□□□□ -0.32
FN1-212ENST00000446046 ARID5AQ03989 594 aa13.08□□□□□ -0.32
FN1-212ENST00000446046 TNNI3KQ59H18 835 aa13.08□□□□□ -0.32
FN1-212ENST00000446046 ADPGKQ9BRR6 497 aa13.08□□□□□ -0.32
FN1-212ENST00000446046 LRRC2Q9BYS8 371 aa13.08□□□□□ -0.32
FN1-212ENST00000446046 FPGT-TNNI3KV9GXZ4 949 aa13.08□□□□□ -0.32
FN1-212ENST00000446046 SPATA5Q8NB90 893 aa13.07□□□□□ -0.32
FN1-212ENST00000446046 LUC7L2Q9Y383 392 aaKnown RBP13.07□□□□□ -0.32
FN1-212ENST00000446046 KLHL40Q2TBA0 621 aa13.07□□□□□ -0.32
FN1-212ENST00000446046 ANO6Q4KMQ2 910 aa13.07□□□□□ -0.32
FN1-212ENST00000446046 ARFGAP3Q9NP61 516 aa13.07□□□□□ -0.32
FN1-212ENST00000446046 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.07□□□□□ -0.324e-9■■■□□ 19.1
FN1-212ENST00000446046 TMEM110-MUSTN1A8MSY1 372 aa13.07□□□□□ -0.32
FN1-212ENST00000446046 GPAA1O43292 621 aa13.07□□□□□ -0.32
FN1-212ENST00000446046 C2CD5Q86YS7 1000 aa13.07□□□□□ -0.32
FN1-212ENST00000446046 TRAF5O00463 557 aa13.07□□□□□ -0.32
FN1-212ENST00000446046 ZBTB16Q05516 673 aa13.07□□□□□ -0.32
FN1-212ENST00000446046 CFAP157Q5JU67 520 aa13.07□□□□□ -0.32
FN1-212ENST00000446046 RSPH3Q86UC2 560 aa13.07□□□□□ -0.32
FN1-212ENST00000446046 FAM193BQ96PV7 902 aaPredicted RBP13.07□□□□□ -0.32
FN1-212ENST00000446046 PODXL2Q9NZ53 605 aa13.07□□□□□ -0.32
FN1-212ENST00000446046 SWAP70Q9UH65 585 aa13.07□□□□□ -0.32
FN1-212ENST00000446046 VWA3AA6NCI4 1184 aa13.07□□□□□ -0.32
FN1-212ENST00000446046 REXO1Q8N1G1 1221 aaKnown RBP13.07□□□□□ -0.32
FN1-212ENST00000446046 TBC1D2Q9BYX2 928 aa13.07□□□□□ -0.32
FN1-212ENST00000446046 RNF216Q9NWF9 866 aaPredicted RBP13.07□□□□□ -0.32
FN1-212ENST00000446046 TTC37Q6PGP7 1564 aa13.07□□□□□ -0.32
FN1-212ENST00000446046 GABPAQ06546 454 aa13.07□□□□□ -0.32
FN1-212ENST00000446046 CCDC110Q8TBZ0 833 aa13.07□□□□□ -0.32
FN1-212ENST00000446046 C16orf45Q96MC5 204 aaPredicted RBP13.07□□□□□ -0.32
FN1-212ENST00000446046 FAM204AQ9H8W3 233 aa13.07□□□□□ -0.32
FN1-212ENST00000446046 TRMT1Q9NXH9 659 aaKnown RBP13.07□□□□□ -0.32
FN1-212ENST00000446046 PA2G4Q9UQ80 394 aaKnown RBP13.07□□□□□ -0.32
FN1-212ENST00000446046 CLTCQ00610 1675 aaKnown RBP13.07□□□□□ -0.32
FN1-212ENST00000446046 ATP7BP35670 1465 aa13.07□□□□□ -0.32
FN1-212ENST00000446046 CETN3O15182 167 aa13.07□□□□□ -0.32
FN1-212ENST00000446046 OSBPP22059 807 aa13.07□□□□□ -0.32
FN1-212ENST00000446046 ERCC5P28715 1186 aaPredicted RBP13.07□□□□□ -0.32
FN1-212ENST00000446046 SNX21Q969T3 373 aa13.07□□□□□ -0.32
FN1-212ENST00000446046 ARMC9Q7Z3E5 817 aa13.06□□□□□ -0.32
FN1-212ENST00000446046 NUCKS1Q9H1E3 243 aaKnown RBP13.06□□□□□ -0.32
FN1-212ENST00000446046 TPCN1Q9ULQ1 816 aa13.06□□□□□ -0.32
FN1-212ENST00000446046 THRAP3Q9Y2W1 955 aaKnown RBP13.06□□□□□ -0.32
FN1-212ENST00000446046 VAMP4O75379 141 aa13.06□□□□□ -0.32
FN1-212ENST00000446046 TNNC1P63316 161 aa13.06□□□□□ -0.32
FN1-212ENST00000446046 NECAB1Q8N987 351 aa13.06□□□□□ -0.32
FN1-212ENST00000446046 FAM200AQ8TCP9 573 aa13.06□□□□□ -0.32
FN1-212ENST00000446046 GALNT17Q6IS24 598 aa13.06□□□□□ -0.32
FN1-212ENST00000446046 GADL1Q6ZQY3 521 aa13.06□□□□□ -0.32
FN1-212ENST00000446046 GIMAP7Q8NHV1 300 aa13.06□□□□□ -0.32
FN1-212ENST00000446046 STIM2Q9P246 746 aa13.06□□□□□ -0.32
FN1-212ENST00000446046 FAM184BQ9ULE4 1060 aa13.06□□□□□ -0.32
FN1-212ENST00000446046 ZBTB8OSQ8IWT0 167 aa13.06□□□□□ -0.32
FN1-212ENST00000446046 ZBTB38Q8NAP3 1195 aaPredicted RBP13.06□□□□□ -0.32
FN1-212ENST00000446046 LARP6Q9BRS8 491 aaKnown RBP13.06□□□□□ -0.32
FN1-212ENST00000446046 F13A1P00488 732 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms