RNA–Protein interactions for RNA: ENST00000445658.6

ERBB2-203, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2 BASIC

Gene ERBB2, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-203ENST00000445658 PRDM1O75626 825 aa14.37□□□□□ -0.11
ERBB2-203ENST00000445658 IRX5P78411 483 aaPredicted RBP14.37□□□□□ -0.11
ERBB2-203ENST00000445658 RASGRF1Q13972 1273 aa14.37□□□□□ -0.11
ERBB2-203ENST00000445658 PUM3Q15397 648 aaKnown RBP14.37□□□□□ -0.11
ERBB2-203ENST00000445658 TEX35Q5T0J7 233 aa14.37□□□□□ -0.11
ERBB2-203ENST00000445658 RC3H1Q5TC82 1133 aaKnown RBP14.37□□□□□ -0.11
ERBB2-203ENST00000445658 ZNF446Q9NWS9 450 aa14.37□□□□□ -0.11
ERBB2-203ENST00000445658 MORC2Q9Y6X9 1032 aaPredicted RBP14.37□□□□□ -0.11
ERBB2-203ENST00000445658 CHD4Q14839 1912 aa14.37□□□□□ -0.11
ERBB2-203ENST00000445658 ADD1P35611 737 aaKnown RBP14.37□□□□□ -0.11
ERBB2-203ENST00000445658 C3orf67Q6ZVT6 689 aa14.37□□□□□ -0.11
ERBB2-203ENST00000445658 SDR42E1Q8WUS8 393 aa14.37□□□□□ -0.11
ERBB2-203ENST00000445658 BCCIPQ9P287 314 aaKnown RBP eCLIP14.37□□□□□ -0.11
ERBB2-203ENST00000445658 ORC3Q9UBD5 711 aaPredicted RBP14.37□□□□□ -0.11
ERBB2-203ENST00000445658 CCNL1Q9UK58 526 aaPredicted RBP14.37□□□□□ -0.11
ERBB2-203ENST00000445658 RCOR1Q9UKL0 485 aa14.37□□□□□ -0.11
ERBB2-203ENST00000445658 CTAGE5O15320 804 aa14.36□□□□□ -0.11
ERBB2-203ENST00000445658 PDE6AP16499 860 aa14.36□□□□□ -0.11
ERBB2-203ENST00000445658 CLCN6P51797 869 aa14.36□□□□□ -0.11
ERBB2-203ENST00000445658 CHRNDQ07001 517 aa14.36□□□□□ -0.11
ERBB2-203ENST00000445658 MAP3K12Q12852 859 aa14.36□□□□□ -0.11
ERBB2-203ENST00000445658 SLC51AQ86UW1 340 aa14.36□□□□□ -0.11
ERBB2-203ENST00000445658 FBXL16Q8N461 479 aa14.36□□□□□ -0.11
ERBB2-203ENST00000445658 LPIN2Q92539 896 aa14.36□□□□□ -0.11
ERBB2-203ENST00000445658 AGXT2Q9BYV1 514 aa14.36□□□□□ -0.11
ERBB2-203ENST00000445658 BAZ2BQ9UIF8 2168 aaKnown RBP14.36□□□□□ -0.11
ERBB2-203ENST00000445658 FOXP2O15409 715 aa14.36□□□□□ -0.11
ERBB2-203ENST00000445658 MYCNP04198 464 aaPredicted RBP14.36□□□□□ -0.11
ERBB2-203ENST00000445658 TPM4P67936 248 aa14.36□□□□□ -0.11
ERBB2-203ENST00000445658 TTF1Q15361 905 aaPredicted RBP14.36□□□□□ -0.11
ERBB2-203ENST00000445658 NYAP1Q6ZVC0 841 aa14.36□□□□□ -0.11
ERBB2-203ENST00000445658 NBPF11Q86T75 865 aa14.36□□□□□ -0.11
ERBB2-203ENST00000445658 ANKRD18AQ8IVF6 992 aa14.36□□□□□ -0.11
ERBB2-203ENST00000445658 SPATA5Q8NB90 893 aa14.36□□□□□ -0.11
ERBB2-203ENST00000445658 PHKBQ93100 1093 aa14.36□□□□□ -0.11
ERBB2-203ENST00000445658 GPR101Q96P66 508 aaPredicted RBP14.36□□□□□ -0.11
ERBB2-203ENST00000445658 UQCRFS1P1P0C7P4 283 aa14.36□□□□□ -0.11
ERBB2-203ENST00000445658 CYP7A1P22680 504 aa14.36□□□□□ -0.11
ERBB2-203ENST00000445658 GABPB1Q06547 395 aaPredicted RBP14.36□□□□□ -0.11
ERBB2-203ENST00000445658 RBM43Q6ZSC3 357 aaKnown RBP14.36□□□□□ -0.11
ERBB2-203ENST00000445658 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.36□□□□□ -0.11
ERBB2-203ENST00000445658 NEMFO60524 1076 aa14.35□□□□□ -0.11
ERBB2-203ENST00000445658 PDIA3P30101 505 aaKnown RBP14.35□□□□□ -0.11
ERBB2-203ENST00000445658 UBASH3AP57075 661 aa14.35□□□□□ -0.11
ERBB2-203ENST00000445658 SETDB2Q96T68 719 aa14.35□□□□□ -0.11
ERBB2-203ENST00000445658 KIAA1468Q9P260 1216 aa14.35□□□□□ -0.11
ERBB2-203ENST00000445658 SLC4A4Q9Y6R1 1079 aa14.35□□□□□ -0.11
ERBB2-203ENST00000445658 TIAM2Q8IVF5 1701 aa14.35□□□□□ -0.11
ERBB2-203ENST00000445658 SPTLC2O15270 562 aa14.35□□□□□ -0.11
ERBB2-203ENST00000445658 ZNF202O95125 648 aa14.35□□□□□ -0.11
ERBB2-203ENST00000445658 EXOSC10Q01780 885 aaKnown RBP14.35□□□□□ -0.11
ERBB2-203ENST00000445658 TMCO3Q6UWJ1 677 aa14.35□□□□□ -0.11
ERBB2-203ENST00000445658 NCOA7Q8NI08 942 aa14.35□□□□□ -0.11
ERBB2-203ENST00000445658 CPLX3Q8WVH0 158 aa14.35□□□□□ -0.11
ERBB2-203ENST00000445658 DPF2Q92785 391 aa14.35□□□□□ -0.11
ERBB2-203ENST00000445658 hCG_1642624A0A1W2PR95 340 aa14.34□□□□□ -0.11
ERBB2-203ENST00000445658 CCDC66A2RUB6 948 aa14.34□□□□□ -0.11
ERBB2-203ENST00000445658 PATL2C9JE40 543 aaKnown RBP14.34□□□□□ -0.11
ERBB2-203ENST00000445658 CLIC6Q96NY7 704 aa14.34□□□□□ -0.11
ERBB2-203ENST00000445658 TAF1P21675 1872 aa14.34□□□□□ -0.11
ERBB2-203ENST00000445658 PFKFB2O60825 505 aa14.34□□□□□ -0.11
ERBB2-203ENST00000445658 KARSQ15046 597 aaKnown RBP14.34□□□□□ -0.11
ERBB2-203ENST00000445658 TBC1D9BQ66K14 1250 aa14.34□□□□□ -0.11
ERBB2-203ENST00000445658 CELF1Q92879 486 aaKnown RBP14.34□□□□□ -0.11
ERBB2-203ENST00000445658 ANKIB1Q9P2G1 1089 aa14.34□□□□□ -0.11
ERBB2-203ENST00000445658 TMEM232C9JQI7 657 aa14.34□□□□□ -0.11
ERBB2-203ENST00000445658 SMIM22K7EJ46 135 aa14.34□□□□□ -0.11
ERBB2-203ENST00000445658 IFIT3O14879 490 aaKnown RBP14.34□□□□□ -0.11
ERBB2-203ENST00000445658 ADD2P35612 726 aa14.34□□□□□ -0.11
ERBB2-203ENST00000445658 GSDMDP57764 484 aa14.34□□□□□ -0.11
ERBB2-203ENST00000445658 FANCCQ00597 558 aa14.34□□□□□ -0.11
ERBB2-203ENST00000445658 PNOCQ13519 176 aa14.34□□□□□ -0.11
ERBB2-203ENST00000445658 BMS1Q14692 1282 aaKnown RBP14.34□□□□□ -0.11
ERBB2-203ENST00000445658 ILDR1Q86SU0 546 aaPredicted RBP14.34□□□□□ -0.11
ERBB2-203ENST00000445658 SENP2Q9HC62 589 aa14.34□□□□□ -0.11
ERBB2-203ENST00000445658 CYP2D7A0A087X1C5 515 aa14.33□□□□□ -0.12
ERBB2-203ENST00000445658 GNG11P61952 73 aa14.33□□□□□ -0.12
ERBB2-203ENST00000445658 HOMEZQ8IX15 550 aa14.33□□□□□ -0.12
ERBB2-203ENST00000445658 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.33□□□□□ -0.12
ERBB2-203ENST00000445658 MYH13Q9UKX3 1938 aa14.33□□□□□ -0.12
ERBB2-203ENST00000445658 RFC4P35249 363 aa14.33□□□□□ -0.12
ERBB2-203ENST00000445658 UBE3CQ15386 1083 aa14.33□□□□□ -0.12
ERBB2-203ENST00000445658 DESI2Q9BSY9 194 aa14.33□□□□□ -0.12
ERBB2-203ENST00000445658 ONECUT3O60422 494 aaPredicted RBP14.32□□□□□ -0.12
ERBB2-203ENST00000445658 CAVIN2O95810 425 aa14.32□□□□□ -0.12
ERBB2-203ENST00000445658 SF3B3Q15393 1217 aaKnown RBP14.32□□□□□ -0.12
ERBB2-203ENST00000445658 ZNF827Q17R98 1081 aa14.32□□□□□ -0.12
ERBB2-203ENST00000445658 TMEM67Q5HYA8 995 aa14.32□□□□□ -0.12
ERBB2-203ENST00000445658 SLC10A5Q5PT55 438 aa14.32□□□□□ -0.12
ERBB2-203ENST00000445658 SARM1Q6SZW1 724 aa14.32□□□□□ -0.12
ERBB2-203ENST00000445658 FMR1NBQ8N0W7 255 aaPredicted RBP14.32□□□□□ -0.12
ERBB2-203ENST00000445658 ENGASEQ8NFI3 743 aa14.32□□□□□ -0.12
ERBB2-203ENST00000445658 TIGD1Q96MW7 591 aa14.32□□□□□ -0.12
ERBB2-203ENST00000445658 CDC5LQ99459 802 aaKnown RBP14.32□□□□□ -0.12
ERBB2-203ENST00000445658 UBE2Q2LH0YL09 131 aa14.32□□□□□ -0.12
ERBB2-203ENST00000445658 RANBP6O60518 1105 aaKnown RBP14.32□□□□□ -0.12
ERBB2-203ENST00000445658 ADKP55263 362 aaKnown RBP14.32□□□□□ -0.12
ERBB2-203ENST00000445658 KIAA1551Q9HCM1 1747 aa14.32□□□□□ -0.12
ERBB2-203ENST00000445658 TCRBV5S4A2TA0A5A2 114 aa14.32□□□□□ -0.12
ERBB2-203ENST00000445658 FDPSP14324 419 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms