RNA–Protein interactions for RNA: ENST00000445569.6

CALD1-211, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-211ENST00000445569 TRIM29Q14134 588 aa12.18□□□□□ -0.46
CALD1-211ENST00000445569 MFSD14BQ5SR56 506 aa12.18□□□□□ -0.46
CALD1-211ENST00000445569 DCAF8Q5TAQ9 597 aa12.18□□□□□ -0.46
CALD1-211ENST00000445569 CTR9Q6PD62 1173 aa12.18□□□□□ -0.46
CALD1-211ENST00000445569 USP48Q86UV5 1035 aa12.18□□□□□ -0.46
CALD1-211ENST00000445569 MICU3Q86XE3 530 aa12.18□□□□□ -0.46
CALD1-211ENST00000445569 TRIM22Q8IYM9 498 aa12.18□□□□□ -0.46
CALD1-211ENST00000445569 SUPT20HQ8NEM7 779 aa12.18□□□□□ -0.46
CALD1-211ENST00000445569 FAM163AQ96GL9 167 aaPredicted RBP12.18□□□□□ -0.46
CALD1-211ENST00000445569 C8orf76Q96K31 380 aa12.18□□□□□ -0.46
CALD1-211ENST00000445569 ZNF396Q96N95 335 aaPredicted RBP12.18□□□□□ -0.46
CALD1-211ENST00000445569 GPHNQ9NQX3 736 aaPredicted RBP12.18□□□□□ -0.46
CALD1-211ENST00000445569 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.18□□□□□ -0.46
CALD1-211ENST00000445569 KIF13BQ9NQT8 1826 aa12.18□□□□□ -0.46
CALD1-211ENST00000445569 USP17L12C9JPN9 530 aa12.17□□□□□ -0.46
CALD1-211ENST00000445569 USP17L21D6R901 530 aa12.17□□□□□ -0.46
CALD1-211ENST00000445569 DDAH1O94760 285 aa12.17□□□□□ -0.46
CALD1-211ENST00000445569 YBX3P16989 372 aaKnown RBP eCLIP12.17□□□□□ -0.46
CALD1-211ENST00000445569 DNM1Q05193 864 aaKnown RBP12.17□□□□□ -0.46
CALD1-211ENST00000445569 RTN1Q16799 776 aa12.17□□□□□ -0.46
CALD1-211ENST00000445569 ZSCAN23Q3MJ62 389 aa12.17□□□□□ -0.46
CALD1-211ENST00000445569 BRAPQ7Z569 592 aa12.17□□□□□ -0.46
CALD1-211ENST00000445569 FERMT3Q86UX7 667 aa12.17□□□□□ -0.46
CALD1-211ENST00000445569 GPT2Q8TD30 523 aa12.17□□□□□ -0.46
CALD1-211ENST00000445569 ZNF622Q969S3 477 aaKnown RBP eCLIP12.17□□□□□ -0.46
CALD1-211ENST00000445569 GPR101Q96P66 508 aaPredicted RBP12.17□□□□□ -0.46
CALD1-211ENST00000445569 RTFDC1Q9BY42 306 aaPredicted RBP12.17□□□□□ -0.46
CALD1-211ENST00000445569 MYH1P12882 1939 aa12.17□□□□□ -0.46
CALD1-211ENST00000445569 PSME4Q14997 1843 aa12.16□□□□□ -0.46
CALD1-211ENST00000445569 MYH6P13533 1939 aa12.16□□□□□ -0.46
CALD1-211ENST00000445569 GPR75-ASB3A0A0A6YYF3 556 aa12.16□□□□□ -0.46
CALD1-211ENST00000445569 RANBP6O60518 1105 aaKnown RBP12.16□□□□□ -0.46
CALD1-211ENST00000445569 LETM1O95202 739 aaPredicted RBP12.16□□□□□ -0.46
CALD1-211ENST00000445569 IARSP41252 1262 aaKnown RBP12.16□□□□□ -0.46
CALD1-211ENST00000445569 BTDP43251 543 aa12.16□□□□□ -0.46
CALD1-211ENST00000445569 FKBP1AP62942 108 aaKnown RBP12.16□□□□□ -0.46
CALD1-211ENST00000445569 FOXD4L6Q3SYB3 417 aaPredicted RBP12.16□□□□□ -0.46
CALD1-211ENST00000445569 FOXD4L3Q6VB84 417 aaPredicted RBP12.16□□□□□ -0.46
CALD1-211ENST00000445569 CATIPQ7Z7H3 387 aa12.16□□□□□ -0.46
CALD1-211ENST00000445569 ZNF654Q8IZM8 581 aa12.16□□□□□ -0.46
CALD1-211ENST00000445569 SPATA32Q96LK8 384 aa12.16□□□□□ -0.46
CALD1-211ENST00000445569 ZSCAN10Q96SZ4 725 aaPredicted RBP12.16□□□□□ -0.46
CALD1-211ENST00000445569 RBM28Q9NW13 759 aaKnown RBP12.16□□□□□ -0.46
CALD1-211ENST00000445569 MCM9Q9NXL9 1143 aa12.16□□□□□ -0.46
CALD1-211ENST00000445569 JAG2Q9Y219 1238 aa12.16□□□□□ -0.46
CALD1-211ENST00000445569 ZNF646O15015 1829 aaPredicted RBP12.16□□□□□ -0.46
CALD1-211ENST00000445569 SLX4Q8IY92 1834 aa12.16□□□□□ -0.46
CALD1-211ENST00000445569 GOLGA6L4A6NEF3 574 aa12.15□□□□□ -0.46
CALD1-211ENST00000445569 IFNAR1P17181 557 aa12.15□□□□□ -0.46
CALD1-211ENST00000445569 SSRP1Q08945 709 aaKnown RBP12.15□□□□□ -0.46
CALD1-211ENST00000445569 SEC23AQ15436 765 aa12.15□□□□□ -0.46
CALD1-211ENST00000445569 DIXDC1Q155Q3 683 aa12.15□□□□□ -0.46
CALD1-211ENST00000445569 CCDC183Q5T5S1 534 aa12.15□□□□□ -0.46
CALD1-211ENST00000445569 IFIT1BQ5T764 474 aaKnown RBP12.15□□□□□ -0.46
CALD1-211ENST00000445569 C12orf60Q5U649 245 aa12.15□□□□□ -0.46
CALD1-211ENST00000445569 PODNQ7Z5L7 613 aa12.15□□□□□ -0.46
CALD1-211ENST00000445569 TEX11Q8IYF3 940 aa12.15□□□□□ -0.46
CALD1-211ENST00000445569 ZNF784Q8NCA9 323 aaPredicted RBP12.15□□□□□ -0.46
CALD1-211ENST00000445569 SH3RF3Q8TEJ3 882 aaPredicted RBP12.15□□□□□ -0.46
CALD1-211ENST00000445569 MYH8P13535 1937 aa12.15□□□□□ -0.46
CALD1-211ENST00000445569 TSPY2A6NKD2 308 aa12.14□□□□□ -0.47
CALD1-211ENST00000445569 FMNL1O95466 1100 aaPredicted RBP12.14□□□□□ -0.47
CALD1-211ENST00000445569 GTF2IP78347 998 aa12.14□□□□□ -0.47
CALD1-211ENST00000445569 FBXO18Q8NFZ0 1043 aa12.14□□□□□ -0.47
CALD1-211ENST00000445569 ALG1Q9BT22 464 aa12.14□□□□□ -0.47
CALD1-211ENST00000445569 GDPD2Q9HCC8 539 aa12.14□□□□□ -0.47
CALD1-211ENST00000445569 TAOK2Q9UL54 1235 aa12.14□□□□□ -0.47
CALD1-211ENST00000445569 RIMBP2O15034 1052 aa12.13□□□□□ -0.47
CALD1-211ENST00000445569 DEXIO95424 95 aa12.13□□□□□ -0.47
CALD1-211ENST00000445569 POLR3DP05423 398 aaPredicted RBP12.13□□□□□ -0.47
CALD1-211ENST00000445569 FDPSP14324 419 aaKnown RBP12.13□□□□□ -0.47
CALD1-211ENST00000445569 XBP1P17861 261 aa12.13□□□□□ -0.47
CALD1-211ENST00000445569 TGFB2P61812 414 aa12.13□□□□□ -0.47
CALD1-211ENST00000445569 AKAP17AQ02040 695 aaKnown RBP12.13□□□□□ -0.47
CALD1-211ENST00000445569 SLC51AQ86UW1 340 aa12.13□□□□□ -0.47
CALD1-211ENST00000445569 ENAHQ8N8S7 591 aaPredicted RBP12.13□□□□□ -0.47
CALD1-211ENST00000445569 LEO1Q8WVC0 666 aaPredicted RBP12.13□□□□□ -0.47
CALD1-211ENST00000445569 FBXW7Q969H0 707 aa12.13□□□□□ -0.47
CALD1-211ENST00000445569 CHAMP1Q96JM3 812 aa12.13□□□□□ -0.47
CALD1-211ENST00000445569 GRPEL1Q9HAV7 217 aa12.13□□□□□ -0.47
CALD1-211ENST00000445569 TMEM63CQ9P1W3 806 aa12.13□□□□□ -0.47
CALD1-211ENST00000445569 RBM27Q9P2N5 1060 aaKnown RBP12.13□□□□□ -0.47
CALD1-211ENST00000445569 MKRN1Q9UHC7 482 aaKnown RBP12.13□□□□□ -0.47
CALD1-211ENST00000445569 TACC3Q9Y6A5 838 aa12.13□□□□□ -0.47
CALD1-211ENST00000445569 UTRNP46939 3433 aa12.13□□□□□ -0.47
CALD1-211ENST00000445569 FLT1P17948 1338 aa12.12□□□□□ -0.47
CALD1-211ENST00000445569 SNED1Q8TER0 1413 aa12.12□□□□□ -0.47
CALD1-211ENST00000445569 CYP2D7A0A087X1C5 515 aa12.12□□□□□ -0.47
CALD1-211ENST00000445569 YEATS4O95619 227 aa12.12□□□□□ -0.47
CALD1-211ENST00000445569 KIF5BP33176 963 aa12.12□□□□□ -0.47
CALD1-211ENST00000445569 GNL2Q13823 731 aaKnown RBP12.12□□□□□ -0.47
CALD1-211ENST00000445569 SAFBQ15424 915 aaKnown RBP eCLIP12.12□□□□□ -0.47
CALD1-211ENST00000445569 NTRK3Q16288 839 aa12.12□□□□□ -0.47
CALD1-211ENST00000445569 SOGA3Q5TF21 947 aa12.12□□□□□ -0.47
CALD1-211ENST00000445569 LRSAM1Q6UWE0 723 aa12.12□□□□□ -0.47
CALD1-211ENST00000445569 HHIPL2Q6UWX4 724 aa12.12□□□□□ -0.47
CALD1-211ENST00000445569 TTC6Q86TZ1 520 aa12.12□□□□□ -0.47
CALD1-211ENST00000445569 RAB11FIP4Q86YS3 637 aa12.12□□□□□ -0.47
CALD1-211ENST00000445569 FANCBQ8NB91 859 aa12.12□□□□□ -0.47
CALD1-211ENST00000445569 CTCFLQ8NI51 663 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms