RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 VEZTQ9HBM0 779 aa8.63□□□□□ -1.03
BRAFP1-201ENST00000445336 PMLP29590 882 aa8.62□□□□□ -1.03
BRAFP1-201ENST00000445336 RIPPLY3P57055 190 aa8.62□□□□□ -1.03
BRAFP1-201ENST00000445336 TLE2Q04725 743 aa8.62□□□□□ -1.03
BRAFP1-201ENST00000445336 SH3RF1Q7Z6J0 888 aa8.62□□□□□ -1.03
BRAFP1-201ENST00000445336 CTNNA3Q9UI47 895 aa8.62□□□□□ -1.03
BRAFP1-201ENST00000445336 LAMA2P24043 3122 aaKnown RBP8.62□□□□□ -1.03
BRAFP1-201ENST00000445336 CLRN2A0PK11 232 aa8.62□□□□□ -1.03
BRAFP1-201ENST00000445336 KRT38O76015 456 aa8.62□□□□□ -1.03
BRAFP1-201ENST00000445336 MAPK4P31152 587 aa8.62□□□□□ -1.03
BRAFP1-201ENST00000445336 RPS8P62241 208 aaKnown RBP8.62□□□□□ -1.03
BRAFP1-201ENST00000445336 USP16Q9Y5T5 823 aa8.62□□□□□ -1.03
BRAFP1-201ENST00000445336 ATXN1P54253 815 aaKnown RBP8.61□□□□□ -1.03
BRAFP1-201ENST00000445336 TRIM32Q13049 653 aa8.61□□□□□ -1.03
BRAFP1-201ENST00000445336 ANKS1AQ92625 1134 aa8.61□□□□□ -1.03
BRAFP1-201ENST00000445336 SLC9A7Q96T83 725 aa8.61□□□□□ -1.03
BRAFP1-201ENST00000445336 FZD1Q9UP38 647 aa8.61□□□□□ -1.03
BRAFP1-201ENST00000445336 DAGLAQ9Y4D2 1042 aa8.61□□□□□ -1.03
BRAFP1-201ENST00000445336 SPTBN4Q9H254 2564 aa8.61□□□□□ -1.03
BRAFP1-201ENST00000445336 SIP14410 1827 aa8.61□□□□□ -1.03
BRAFP1-201ENST00000445336 VCPP55072 806 aaKnown RBP8.61□□□□□ -1.03
BRAFP1-201ENST00000445336 GRB10Q13322 594 aa8.61□□□□□ -1.03
BRAFP1-201ENST00000445336 C15orf52Q6ZUT6 534 aaKnown RBP8.61□□□□□ -1.03
BRAFP1-201ENST00000445336 HNRNPABQ99729 332 aaKnown RBP8.61□□□□□ -1.03
BRAFP1-201ENST00000445336 TMEM39AQ9NV64 488 aa8.61□□□□□ -1.03
BRAFP1-201ENST00000445336 RUBCNQ92622 972 aa8.6□□□□□ -1.03
BRAFP1-201ENST00000445336 PABPC5Q96DU9 382 aaKnown RBP8.6□□□□□ -1.03
BRAFP1-201ENST00000445336 AGTPBP1Q9UPW5 1226 aa8.6□□□□□ -1.03
BRAFP1-201ENST00000445336 FANCMQ8IYD8 2048 aa8.6□□□□□ -1.03
BRAFP1-201ENST00000445336 FGBP02675 491 aa8.6□□□□□ -1.03
BRAFP1-201ENST00000445336 HOXC6P09630 235 aa8.6□□□□□ -1.03
BRAFP1-201ENST00000445336 TIGD5Q53EQ6 642 aa8.6□□□□□ -1.03
BRAFP1-201ENST00000445336 MORN1Q5T089 497 aa8.6□□□□□ -1.03
BRAFP1-201ENST00000445336 C16orf59Q7L2K0 433 aa8.6□□□□□ -1.03
BRAFP1-201ENST00000445336 PROCA1Q8NCQ7 364 aaPredicted RBP8.6□□□□□ -1.03
BRAFP1-201ENST00000445336 CHD6Q8TD26 2715 aa8.6□□□□□ -1.03
BRAFP1-201ENST00000445336 FAM186AA6NE01 2351 aa8.6□□□□□ -1.03
BRAFP1-201ENST00000445336 UNC79Q9P2D8 2635 aa8.6□□□□□ -1.03
BRAFP1-201ENST00000445336 H0Y858 1186 aa8.6□□□□□ -1.03
BRAFP1-201ENST00000445336 CCND3P30281 292 aaPredicted RBP8.6□□□□□ -1.03
BRAFP1-201ENST00000445336 TLR9Q9NR96 1032 aa8.6□□□□□ -1.03
BRAFP1-201ENST00000445336 SERPINA10Q9UK55 444 aa8.6□□□□□ -1.03
BRAFP1-201ENST00000445336 SCAF8Q9UPN6 1271 aaKnown RBP8.6□□□□□ -1.03
BRAFP1-201ENST00000445336 PRUNE2Q8WUY3 3088 aa8.59□□□□□ -1.03
BRAFP1-201ENST00000445336 LPXNO60711 386 aa8.59□□□□□ -1.03
BRAFP1-201ENST00000445336 CLCN5P51795 746 aa8.59□□□□□ -1.03
BRAFP1-201ENST00000445336 DOCK1Q14185 1865 aa8.59□□□□□ -1.03
BRAFP1-201ENST00000445336 KRTAP21-3Q3LHN1 58 aa8.59□□□□□ -1.03
BRAFP1-201ENST00000445336 TMEM67Q5HYA8 995 aa8.59□□□□□ -1.03
BRAFP1-201ENST00000445336 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.59□□□□□ -1.03
BRAFP1-201ENST00000445336 ZNF70Q9UC06 446 aaPredicted RBP8.59□□□□□ -1.03
BRAFP1-201ENST00000445336 LOC730098B7Z3J9 87 aa8.59□□□□□ -1.03
BRAFP1-201ENST00000445336 ATN1P54259 1190 aaPredicted RBP8.59□□□□□ -1.03
BRAFP1-201ENST00000445336 HDLBPQ00341 1268 aaKnown RBP8.59□□□□□ -1.03
BRAFP1-201ENST00000445336 CFAP100Q494V2 611 aa8.59□□□□□ -1.03
BRAFP1-201ENST00000445336 MUTYHQ9UIF7 546 aa8.59□□□□□ -1.03
BRAFP1-201ENST00000445336 LEMD3Q9Y2U8 911 aa8.59□□□□□ -1.03
BRAFP1-201ENST00000445336 EIF4G2P78344 907 aaKnown RBP eCLIP8.58□□□□□ -1.04
BRAFP1-201ENST00000445336 SMAD4Q13485 552 aaKnown RBP8.58□□□□□ -1.04
BRAFP1-201ENST00000445336 RPUSD2Q8IZ73 545 aaKnown RBP8.58□□□□□ -1.04
BRAFP1-201ENST00000445336 GAS2L2Q8NHY3 880 aa8.58□□□□□ -1.04
BRAFP1-201ENST00000445336 LHX6Q9UPM6 363 aa8.58□□□□□ -1.04
BRAFP1-201ENST00000445336 PPM1GO15355 546 aaPredicted RBP8.58□□□□□ -1.04
BRAFP1-201ENST00000445336 TNNT2P45379 298 aaPredicted RBP8.58□□□□□ -1.04
BRAFP1-201ENST00000445336 WRNIP1Q96S55 665 aa8.58□□□□□ -1.04
BRAFP1-201ENST00000445336 GRXCR1A8MXD5 290 aa8.57□□□□□ -1.04
BRAFP1-201ENST00000445336 ZNF365Q70YC5 407 aa8.57□□□□□ -1.04
BRAFP1-201ENST00000445336 SMCR8Q8TEV9 937 aaPredicted RBP8.57□□□□□ -1.04
BRAFP1-201ENST00000445336 CELF1Q92879 486 aaKnown RBP8.57□□□□□ -1.04
BRAFP1-201ENST00000445336 RIPOR3Q96MK2 946 aa8.57□□□□□ -1.04
BRAFP1-201ENST00000445336 RSPH6AQ9H0K4 717 aa8.57□□□□□ -1.04
BRAFP1-201ENST00000445336 SLC4A7Q9Y6M7 1214 aa8.57□□□□□ -1.04
BRAFP1-201ENST00000445336 LOC105371045A0A1W2PR82 267 aa8.57□□□□□ -1.04
BRAFP1-201ENST00000445336 TK2O00142 265 aa8.57□□□□□ -1.04
BRAFP1-201ENST00000445336 FOXD2O60548 495 aaPredicted RBP8.57□□□□□ -1.04
BRAFP1-201ENST00000445336 OLFML2BQ68BL8 750 aa8.57□□□□□ -1.04
BRAFP1-201ENST00000445336 ZC3H14Q6PJT7 736 aaKnown RBP8.57□□□□□ -1.04
BRAFP1-201ENST00000445336 MRIQ9BWK5 157 aa8.57□□□□□ -1.04
BRAFP1-201ENST00000445336 USP24Q9UPU5 2620 aa8.57□□□□□ -1.04
BRAFP1-201ENST00000445336 GLRX3O76003 335 aaKnown RBP8.56□□□□□ -1.04
BRAFP1-201ENST00000445336 CYP2C8P10632 490 aa8.56□□□□□ -1.04
BRAFP1-201ENST00000445336 FAAP100Q0VG06 881 aa8.56□□□□□ -1.04
BRAFP1-201ENST00000445336 LRRC41Q15345 812 aa8.56□□□□□ -1.04
BRAFP1-201ENST00000445336 TTLL5Q6EMB2 1281 aa8.56□□□□□ -1.04
BRAFP1-201ENST00000445336 SULT6B1Q6IMI4 303 aa8.56□□□□□ -1.04
BRAFP1-201ENST00000445336 TESK2Q96S53 571 aa8.56□□□□□ -1.04
BRAFP1-201ENST00000445336 KDM4AO75164 1064 aa8.56□□□□□ -1.04
BRAFP1-201ENST00000445336 NLRP10Q86W26 655 aa8.56□□□□□ -1.04
BRAFP1-201ENST00000445336 GLIS3Q8NEA6 775 aa8.56□□□□□ -1.04
BRAFP1-201ENST00000445336 SAMD11Q96NU1 681 aa8.56□□□□□ -1.04
BRAFP1-201ENST00000445336 CDV3Q9UKY7 258 aaKnown RBP8.56□□□□□ -1.04
BRAFP1-201ENST00000445336 ACACBO00763 2458 aa8.55□□□□□ -1.04
BRAFP1-201ENST00000445336 GNAT3A8MTJ3 354 aa8.55□□□□□ -1.04
BRAFP1-201ENST00000445336 TAP1Q03518 808 aa8.55□□□□□ -1.04
BRAFP1-201ENST00000445336 UBALD2Q8IYN6 164 aa8.55□□□□□ -1.04
BRAFP1-201ENST00000445336 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.55□□□□□ -1.04
BRAFP1-201ENST00000445336 ANKIB1Q9P2G1 1089 aa8.55□□□□□ -1.04
BRAFP1-201ENST00000445336 CYBAP13498 195 aa8.55□□□□□ -1.04
BRAFP1-201ENST00000445336 IL13P35225 146 aa8.55□□□□□ -1.04
BRAFP1-201ENST00000445336 KIAA2013Q8IYS2 634 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms