RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 MAP3K10Q02779 954 aa17.95■□□□□ 0.46
CCNE1-203ENST00000444983 AKNAD1Q5T1N1 836 aa17.95■□□□□ 0.46
CCNE1-203ENST00000444983 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.95■□□□□ 0.46
CCNE1-203ENST00000444983 POTEIP0CG38 1075 aa17.94■□□□□ 0.46
CCNE1-203ENST00000444983 POTEJP0CG39 1038 aa17.94■□□□□ 0.46
CCNE1-203ENST00000444983 COL9A3Q14050 684 aaPredicted RBP17.94■□□□□ 0.46
CCNE1-203ENST00000444983 SLC4A8Q2Y0W8 1093 aa17.94■□□□□ 0.46
CCNE1-203ENST00000444983 C16orf86Q6ZW13 317 aa17.94■□□□□ 0.46
CCNE1-203ENST00000444983 AMOTL1Q8IY63 956 aa17.94■□□□□ 0.46
CCNE1-203ENST00000444983 INCENPQ9NQS7 918 aa17.94■□□□□ 0.46
CCNE1-203ENST00000444983 SERPINB13Q9UIV8 391 aa17.94■□□□□ 0.46
CCNE1-203ENST00000444983 PPP2R3BQ9Y5P8 575 aa17.94■□□□□ 0.46
CCNE1-203ENST00000444983 PCP11498 1178 aaKnown RBP17.93■□□□□ 0.46
CCNE1-203ENST00000444983 KRT32Q14532 448 aa17.93■□□□□ 0.46
CCNE1-203ENST00000444983 FOXP4Q8IVH2 680 aaPredicted RBP17.93■□□□□ 0.46
CCNE1-203ENST00000444983 NKX2-3Q8TAU0 364 aa17.93■□□□□ 0.46
CCNE1-203ENST00000444983 DCPSQ96C86 337 aaKnown RBP17.93■□□□□ 0.46
CCNE1-203ENST00000444983 DYNLL2Q96FJ2 89 aa17.93■□□□□ 0.46
CCNE1-203ENST00000444983 CSRNP1Q96S65 589 aa17.93■□□□□ 0.46
CCNE1-203ENST00000444983 TM6SF1Q9BZW5 370 aa17.93■□□□□ 0.46
CCNE1-203ENST00000444983 DNAJC18Q9H819 358 aa17.93■□□□□ 0.46
CCNE1-203ENST00000444983 HLA-DOAP06340 250 aa17.93■□□□□ 0.46
CCNE1-203ENST00000444983 EAPPQ56P03 285 aaPredicted RBP17.93■□□□□ 0.46
CCNE1-203ENST00000444983 MFSD6Q6ZSS7 791 aa17.93■□□□□ 0.46
CCNE1-203ENST00000444983 ORC4O43929 436 aa17.92■□□□□ 0.46
CCNE1-203ENST00000444983 TBC1D12O60347 775 aa17.92■□□□□ 0.46
CCNE1-203ENST00000444983 SLURP2P0DP57 97 aa17.92■□□□□ 0.46
CCNE1-203ENST00000444983 ZSCAN29Q8IWY8 852 aaPredicted RBP17.92■□□□□ 0.46
CCNE1-203ENST00000444983 RNF41Q9H4P4 317 aaPredicted RBP17.92■□□□□ 0.46
CCNE1-203ENST00000444983 ZSWIM6Q9HCJ5 1215 aa17.92■□□□□ 0.46
CCNE1-203ENST00000444983 NEDD4P46934 1319 aa17.92■□□□□ 0.46
CCNE1-203ENST00000444983 SLC3A2P08195 630 aaKnown RBP17.91■□□□□ 0.46
CCNE1-203ENST00000444983 CDK8P49336 464 aa17.91■□□□□ 0.46
CCNE1-203ENST00000444983 TATDN1Q6P1N9 297 aa17.91■□□□□ 0.46
CCNE1-203ENST00000444983 SLC44A5Q8NCS7 719 aa17.91■□□□□ 0.46
CCNE1-203ENST00000444983 ZNF526Q8TF50 670 aaPredicted RBP17.91■□□□□ 0.46
CCNE1-203ENST00000444983 SWAP70Q9UH65 585 aa17.91■□□□□ 0.46
CCNE1-203ENST00000444983 HERC5Q9UII4 1024 aaKnown RBP17.91■□□□□ 0.46
CCNE1-203ENST00000444983 SHMT1P34896 483 aa17.9■□□□□ 0.46
CCNE1-203ENST00000444983 PDE4BQ07343 736 aa17.9■□□□□ 0.46
CCNE1-203ENST00000444983 NBPF12Q5TAG4 269 aaPredicted RBP17.9■□□□□ 0.46
CCNE1-203ENST00000444983 LDHDQ86WU2 507 aa17.9■□□□□ 0.46
CCNE1-203ENST00000444983 SULF1Q8IWU6 871 aa17.9■□□□□ 0.46
CCNE1-203ENST00000444983 MB21D2Q8IYB1 491 aaPredicted RBP17.9■□□□□ 0.46
CCNE1-203ENST00000444983 NEK1Q96PY6 1258 aa17.9■□□□□ 0.46
CCNE1-203ENST00000444983 CNNM2Q9H8M5 875 aa17.9■□□□□ 0.46
CCNE1-203ENST00000444983 SSC5DA1L4H1 1573 aa17.9■□□□□ 0.46
CCNE1-203ENST00000444983 NT5C2P49902 561 aa17.9■□□□□ 0.46
CCNE1-203ENST00000444983 CDC37L1Q7L3B6 337 aa17.9■□□□□ 0.46
CCNE1-203ENST00000444983 KRT26Q7Z3Y9 468 aa17.9■□□□□ 0.46
CCNE1-203ENST00000444983 STK11IPQ8N1F8 1099 aa17.9■□□□□ 0.46
CCNE1-203ENST00000444983 NCOA7Q8NI08 942 aa17.9■□□□□ 0.46
CCNE1-203ENST00000444983 JAKMIP1Q96N16 626 aaKnown RBP17.9■□□□□ 0.46
CCNE1-203ENST00000444983 MYH8P13535 1937 aa17.89■□□□□ 0.45
CCNE1-203ENST00000444983 ADM5C9JUS6 153 aa17.89■□□□□ 0.45
CCNE1-203ENST00000444983 PRDM1O75626 825 aa17.89■□□□□ 0.45
CCNE1-203ENST00000444983 RASA1P20936 1047 aa17.89■□□□□ 0.45
CCNE1-203ENST00000444983 PSMA5P28066 241 aa17.89■□□□□ 0.45
CCNE1-203ENST00000444983 EXOSC10Q01780 885 aaKnown RBP17.89■□□□□ 0.45
CCNE1-203ENST00000444983 PRAMEF18Q5VWM3 479 aa17.89■□□□□ 0.45
CCNE1-203ENST00000444983 DLK2Q6UY11 383 aa17.89■□□□□ 0.45
CCNE1-203ENST00000444983 KRT23Q9C075 422 aa17.89■□□□□ 0.45
CCNE1-203ENST00000444983 ZNF287Q9HBT7 754 aa17.89■□□□□ 0.45
CCNE1-203ENST00000444983 TSHZ2Q9NRE2 1034 aa17.89■□□□□ 0.45
CCNE1-203ENST00000444983 B4E1Z4 1266 aa17.88■□□□□ 0.45
CCNE1-203ENST00000444983 RUFY3Q7L099 469 aa17.88■□□□□ 0.45
CCNE1-203ENST00000444983 ZSWIM5Q9P217 1185 aa17.88■□□□□ 0.45
CCNE1-203ENST00000444983 GREB1LQ9C091 1923 aaPredicted RBP17.88■□□□□ 0.45
CCNE1-203ENST00000444983 FAM196BA6NMK8 535 aa17.87■□□□□ 0.45
CCNE1-203ENST00000444983 HMGB1P09429 215 aaKnown RBP17.87■□□□□ 0.45
CCNE1-203ENST00000444983 CASTP20810 708 aaKnown RBP17.87■□□□□ 0.45
CCNE1-203ENST00000444983 ANTXR2P58335 489 aa17.87■□□□□ 0.45
CCNE1-203ENST00000444983 TRDNQ13061 729 aa17.87■□□□□ 0.45
CCNE1-203ENST00000444983 MAP1SQ66K74 1059 aaPredicted RBP17.87■□□□□ 0.45
CCNE1-203ENST00000444983 USP48Q86UV5 1035 aa17.87■□□□□ 0.45
CCNE1-203ENST00000444983 CRACR2BQ8N4Y2 399 aaPredicted RBP17.87■□□□□ 0.45
CCNE1-203ENST00000444983 GLIS2Q9BZE0 524 aaPredicted RBP17.87■□□□□ 0.45
CCNE1-203ENST00000444983 GPBP1L1Q9HC44 474 aaPredicted RBP17.87■□□□□ 0.45
CCNE1-203ENST00000444983 CLEC11AQ9Y240 323 aa17.87■□□□□ 0.45
CCNE1-203ENST00000444983 PHF20L1A8MW92 1017 aa17.87■□□□□ 0.45
CCNE1-203ENST00000444983 KIF3CO14782 793 aa17.87■□□□□ 0.45
CCNE1-203ENST00000444983 KDM4AO75164 1064 aa17.87■□□□□ 0.45
CCNE1-203ENST00000444983 CPA1P15085 419 aa17.87■□□□□ 0.45
CCNE1-203ENST00000444983 RRP1BQ14684 758 aaKnown RBP17.87■□□□□ 0.45
CCNE1-203ENST00000444983 RABEP1Q15276 862 aa17.87■□□□□ 0.45
CCNE1-203ENST00000444983 BLOC1S2Q6QNY1 142 aa17.87■□□□□ 0.45
CCNE1-203ENST00000444983 CYB5R4Q7L1T6 521 aa17.87■□□□□ 0.45
CCNE1-203ENST00000444983 MIGA2Q7L4E1 593 aa17.87■□□□□ 0.45
CCNE1-203ENST00000444983 DHX32Q7L7V1 743 aaKnown RBP17.87■□□□□ 0.45
CCNE1-203ENST00000444983 FBXL16Q8N461 479 aa17.87■□□□□ 0.45
CCNE1-203ENST00000444983 ESR2Q92731 530 aa17.87■□□□□ 0.45
CCNE1-203ENST00000444983 UPF3BQ9BZI7 483 aaKnown RBP17.87■□□□□ 0.45
CCNE1-203ENST00000444983 MKNK2Q9HBH9 465 aa17.87■□□□□ 0.45
CCNE1-203ENST00000444983 RPS6KB1P23443 525 aa17.86■□□□□ 0.45
CCNE1-203ENST00000444983 SUPT20HL1Q3ZLR7 823 aa17.86■□□□□ 0.45
CCNE1-203ENST00000444983 RALYLQ86SE5 291 aaKnown RBP17.86■□□□□ 0.45
CCNE1-203ENST00000444983 IL27Q8NEV9 243 aa17.86■□□□□ 0.45
CCNE1-203ENST00000444983 WDR19Q8NEZ3 1342 aa17.86■□□□□ 0.45
CCNE1-203ENST00000444983 HOOK2Q96ED9 719 aa17.86■□□□□ 0.45
CCNE1-203ENST00000444983 TTC14Q96N46 770 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms