RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 GPATCH3Q96I76 525 aa16.38■□□□□ 0.21
GARNL3-208ENST00000444677 MBD4O95243 580 aa16.37■□□□□ 0.21
GARNL3-208ENST00000444677 PTPRAP18433 802 aa16.37■□□□□ 0.21
GARNL3-208ENST00000444677 MX1P20591 662 aa16.37■□□□□ 0.21
GARNL3-208ENST00000444677 GTF2A2P52657 109 aa16.37■□□□□ 0.21
GARNL3-208ENST00000444677 PPATQ06203 517 aa16.37■□□□□ 0.21
GARNL3-208ENST00000444677 SHROOM1Q2M3G4 852 aaPredicted RBP16.37■□□□□ 0.21
GARNL3-208ENST00000444677 FAM43AQ8N2R8 423 aa16.37■□□□□ 0.21
GARNL3-208ENST00000444677 SDR42E1Q8WUS8 393 aa16.37■□□□□ 0.21
GARNL3-208ENST00000444677 LNPKQ9C0E8 428 aa16.37■□□□□ 0.21
GARNL3-208ENST00000444677 PUS7LQ9H0K6 701 aaKnown RBP16.37■□□□□ 0.21
GARNL3-208ENST00000444677 DHX36Q9H2U1 1008 aaKnown RBP16.37■□□□□ 0.21
GARNL3-208ENST00000444677 PI4KBQ9UBF8 816 aa16.37■□□□□ 0.21
GARNL3-208ENST00000444677 ZHX2Q9Y6X8 837 aa16.37■□□□□ 0.21
GARNL3-208ENST00000444677 CTNND1O60716 968 aaKnown RBP16.36■□□□□ 0.21
GARNL3-208ENST00000444677 UBE3CQ15386 1083 aa16.36■□□□□ 0.21
GARNL3-208ENST00000444677 TMED8Q6PL24 325 aaPredicted RBP16.36■□□□□ 0.21
GARNL3-208ENST00000444677 KBTBD3Q8NAB2 608 aa16.36■□□□□ 0.21
GARNL3-208ENST00000444677 ABHD8Q96I13 439 aa16.36■□□□□ 0.21
GARNL3-208ENST00000444677 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.36■□□□□ 0.21
GARNL3-208ENST00000444677 ZBTB47Q9UFB7 747 aaPredicted RBP16.36■□□□□ 0.21
GARNL3-208ENST00000444677 TTC41PQ6P2S7 1318 aa16.36■□□□□ 0.21
GARNL3-208ENST00000444677 COL2A1P02458 1487 aaPredicted RBP16.35■□□□□ 0.21
GARNL3-208ENST00000444677 AK9Q5TCS8 1911 aa16.35■□□□□ 0.21
GARNL3-208ENST00000444677 BTBD19C9JJ37 291 aa16.35■□□□□ 0.21
GARNL3-208ENST00000444677 CYP2D6P10635 497 aa16.35■□□□□ 0.21
GARNL3-208ENST00000444677 PLCD1P51178 756 aa16.35■□□□□ 0.21
GARNL3-208ENST00000444677 SNAPC2Q13487 334 aa16.35■□□□□ 0.21
GARNL3-208ENST00000444677 MOGSQ13724 837 aa16.35■□□□□ 0.21
GARNL3-208ENST00000444677 METTL16Q86W50 562 aaKnown RBP16.35■□□□□ 0.21
GARNL3-208ENST00000444677 FOXP4Q8IVH2 680 aaPredicted RBP16.35■□□□□ 0.21
GARNL3-208ENST00000444677 OSBP2Q969R2 916 aa16.35■□□□□ 0.21
GARNL3-208ENST00000444677 CRNKL1Q9BZJ0 848 aaKnown RBP16.35■□□□□ 0.21
GARNL3-208ENST00000444677 PICK1Q9NRD5 415 aa16.35■□□□□ 0.21
GARNL3-208ENST00000444677 KCNH4Q9UQ05 1017 aa16.35■□□□□ 0.21
GARNL3-208ENST00000444677 SMIM22K7EJ46 135 aa16.34■□□□□ 0.21
GARNL3-208ENST00000444677 GPR25O00155 361 aa16.34■□□□□ 0.21
GARNL3-208ENST00000444677 ERC2O15083 957 aa16.34■□□□□ 0.21
GARNL3-208ENST00000444677 RNF113AO15541 343 aaKnown RBP16.34■□□□□ 0.21
GARNL3-208ENST00000444677 GLRX3O76003 335 aaKnown RBP16.34■□□□□ 0.21
GARNL3-208ENST00000444677 CETPP11597 493 aa16.34■□□□□ 0.21
GARNL3-208ENST00000444677 CAP2P40123 477 aa16.34■□□□□ 0.21
GARNL3-208ENST00000444677 PDE1AP54750 535 aa16.34■□□□□ 0.21
GARNL3-208ENST00000444677 CRHR2Q13324 411 aa16.34■□□□□ 0.21
GARNL3-208ENST00000444677 CERS3Q8IU89 383 aa16.34■□□□□ 0.21
GARNL3-208ENST00000444677 CRACR2BQ8N4Y2 399 aaPredicted RBP16.34■□□□□ 0.21
GARNL3-208ENST00000444677 ZNF296Q8WUU4 475 aaPredicted RBP16.34■□□□□ 0.21
GARNL3-208ENST00000444677 DCP1AQ9NPI6 582 aaPredicted RBP16.34■□□□□ 0.21
GARNL3-208ENST00000444677 STAP2Q9UGK3 403 aa16.34■□□□□ 0.21
GARNL3-208ENST00000444677 HERC5Q9UII4 1024 aaKnown RBP16.34■□□□□ 0.21
GARNL3-208ENST00000444677 AFG3L2Q9Y4W6 797 aa16.34■□□□□ 0.21
GARNL3-208ENST00000444677 GDF11O95390 407 aa16.33■□□□□ 0.2
GARNL3-208ENST00000444677 ALDH1A1P00352 501 aa16.33■□□□□ 0.2
GARNL3-208ENST00000444677 HLA-DOAP06340 250 aa16.33■□□□□ 0.2
GARNL3-208ENST00000444677 ZSCAN25Q6NSZ9 544 aa16.33■□□□□ 0.2
GARNL3-208ENST00000444677 CHD1LQ86WJ1 897 aa16.33■□□□□ 0.2
GARNL3-208ENST00000444677 CFHR5Q9BXR6 569 aa16.33■□□□□ 0.2
GARNL3-208ENST00000444677 MCM9Q9NXL9 1143 aa16.33■□□□□ 0.2
GARNL3-208ENST00000444677 MAST2Q6P0Q8 1798 aa16.33■□□□□ 0.2
GARNL3-208ENST00000444677 TRIM75PA6NK02 468 aa16.32■□□□□ 0.2
GARNL3-208ENST00000444677 CXCL11O14625 94 aa16.32■□□□□ 0.2
GARNL3-208ENST00000444677 POLR3DP05423 398 aaPredicted RBP16.32■□□□□ 0.2
GARNL3-208ENST00000444677 NUCB1Q02818 461 aa16.32■□□□□ 0.2
GARNL3-208ENST00000444677 DGKZQ13574 1117 aa16.32■□□□□ 0.2
GARNL3-208ENST00000444677 OTUD7BQ6GQQ9 843 aa16.32■□□□□ 0.2
GARNL3-208ENST00000444677 DOCK2Q92608 1830 aa16.32■□□□□ 0.2
GARNL3-208ENST00000444677 SEC62Q99442 399 aaKnown RBP16.32■□□□□ 0.2
GARNL3-208ENST00000444677 TRIM34Q9BYJ4 488 aa16.32■□□□□ 0.2
GARNL3-208ENST00000444677 MCOLN1Q9GZU1 580 aa16.32■□□□□ 0.2
GARNL3-208ENST00000444677 MYO5AQ9Y4I1 1855 aaKnown RBP16.32■□□□□ 0.2
GARNL3-208ENST00000444677 SLC4A4Q9Y6R1 1079 aa16.32■□□□□ 0.2
GARNL3-208ENST00000444677 CYP2D7A0A087X1C5 515 aa16.31■□□□□ 0.2
GARNL3-208ENST00000444677 M0R2C6 588 aa16.31■□□□□ 0.2
GARNL3-208ENST00000444677 TAF1CQ15572 869 aaPredicted RBP16.31■□□□□ 0.2
GARNL3-208ENST00000444677 GPAT2Q6NUI2 795 aa16.31■□□□□ 0.2
GARNL3-208ENST00000444677 TTC6Q86TZ1 520 aa16.31■□□□□ 0.2
GARNL3-208ENST00000444677 DYNLL2Q96FJ2 89 aa16.31■□□□□ 0.2
GARNL3-208ENST00000444677 STRBPQ96SI9 672 aaKnown RBP16.31■□□□□ 0.2
GARNL3-208ENST00000444677 FSD1Q9BTV5 496 aa16.31■□□□□ 0.2
GARNL3-208ENST00000444677 CAP1Q01518 475 aa16.3■□□□□ 0.2
GARNL3-208ENST00000444677 SPP2Q13103 211 aa16.3■□□□□ 0.2
GARNL3-208ENST00000444677 PLEKHM2Q8IWE5 1019 aa16.3■□□□□ 0.2
GARNL3-208ENST00000444677 APPBP2Q92624 585 aa16.3■□□□□ 0.2
GARNL3-208ENST00000444677 A0A0G2JLL6 359 aaPredicted RBP16.29■□□□□ 0.2
GARNL3-208ENST00000444677 CCDC85CA6NKD9 419 aa16.29■□□□□ 0.2
GARNL3-208ENST00000444677 USP17L5A8MUK1 530 aa16.29■□□□□ 0.2
GARNL3-208ENST00000444677 PDHXO00330 501 aa16.29■□□□□ 0.2
GARNL3-208ENST00000444677 FKTNO75072 461 aa16.29■□□□□ 0.2
GARNL3-208ENST00000444677 SHMT1P34896 483 aa16.29■□□□□ 0.2
GARNL3-208ENST00000444677 GABPAQ06546 454 aa16.29■□□□□ 0.2
GARNL3-208ENST00000444677 TATDN1Q6P1N9 297 aa16.29■□□□□ 0.2
GARNL3-208ENST00000444677 GADL1Q6ZQY3 521 aa16.29■□□□□ 0.2
GARNL3-208ENST00000444677 PRRT2Q7Z6L0 340 aaPredicted RBP16.29■□□□□ 0.2
GARNL3-208ENST00000444677 ANKRD23Q86SG2 305 aa16.29■□□□□ 0.2
GARNL3-208ENST00000444677 SLC44A5Q8NCS7 719 aa16.29■□□□□ 0.2
GARNL3-208ENST00000444677 EHD4Q9H223 541 aa16.29■□□□□ 0.2
GARNL3-208ENST00000444677 SERPINB13Q9UIV8 391 aa16.29■□□□□ 0.2
GARNL3-208ENST00000444677 GSG1L2A8MUP6 293 aa16.28■□□□□ 0.2
GARNL3-208ENST00000444677 USP17L12C9JPN9 530 aa16.28■□□□□ 0.2
GARNL3-208ENST00000444677 USP17L21D6R901 530 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms