RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 SLC5A1P13866 664 aa13.24□□□□□ -0.29
HCFC1-203ENST00000444191 ANTXR2P58335 489 aa13.24□□□□□ -0.29
HCFC1-203ENST00000444191 CDC5LQ99459 802 aaKnown RBP13.24□□□□□ -0.29
HCFC1-203ENST00000444191 PARD6BQ9BYG5 372 aa13.24□□□□□ -0.29
HCFC1-203ENST00000444191 CYP2D7A0A087X1C5 515 aa13.24□□□□□ -0.29
HCFC1-203ENST00000444191 CCDC196A0A1B0GTZ2 297 aa13.24□□□□□ -0.29
HCFC1-203ENST00000444191 EIF3JO75822 258 aaKnown RBP13.24□□□□□ -0.29
HCFC1-203ENST00000444191 ST5P78524 1137 aa13.24□□□□□ -0.29
HCFC1-203ENST00000444191 TTF1Q15361 905 aaPredicted RBP13.24□□□□□ -0.29
HCFC1-203ENST00000444191 ACRBPQ8NEB7 543 aa13.24□□□□□ -0.29
HCFC1-203ENST00000444191 OSBPL5Q9H0X9 879 aaPredicted RBP13.24□□□□□ -0.29
HCFC1-203ENST00000444191 VAT1LQ9HCJ6 419 aa13.24□□□□□ -0.29
HCFC1-203ENST00000444191 JADE2Q9NQC1 790 aa13.24□□□□□ -0.29
HCFC1-203ENST00000444191 CTAGE9A4FU28 777 aa13.23□□□□□ -0.29
HCFC1-203ENST00000444191 OXER1Q8TDS5 423 aa13.23□□□□□ -0.29
HCFC1-203ENST00000444191 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.23□□□□□ -0.29
HCFC1-203ENST00000444191 CSRNP2Q9H175 543 aa13.23□□□□□ -0.29
HCFC1-203ENST00000444191 DEF6Q9H4E7 631 aa13.23□□□□□ -0.29
HCFC1-203ENST00000444191 MAN1B1Q9UKM7 699 aa13.23□□□□□ -0.29
HCFC1-203ENST00000444191 FAM205CA6NFA0 338 aa13.23□□□□□ -0.29
HCFC1-203ENST00000444191 H7C1W4 665 aa13.23□□□□□ -0.29
HCFC1-203ENST00000444191 TXLNAP40222 546 aa13.23□□□□□ -0.29
HCFC1-203ENST00000444191 BCAMP50895 628 aa13.23□□□□□ -0.29
HCFC1-203ENST00000444191 MRPS25P82663 173 aaKnown RBP13.23□□□□□ -0.29
HCFC1-203ENST00000444191 UBXN1Q04323 297 aa13.23□□□□□ -0.29
HCFC1-203ENST00000444191 ACSBG1Q96GR2 724 aa13.23□□□□□ -0.29
HCFC1-203ENST00000444191 SRRTQ9BXP5 876 aaKnown RBP13.23□□□□□ -0.29
HCFC1-203ENST00000444191 PDE11AQ9HCR9 933 aa13.23□□□□□ -0.29
HCFC1-203ENST00000444191 ZMYM6O95789 1325 aa13.23□□□□□ -0.29
HCFC1-203ENST00000444191 CTAGE15A4D2H0 777 aa13.22□□□□□ -0.29
HCFC1-203ENST00000444191 SSBP05455 408 aaKnown RBP eCLIP13.22□□□□□ -0.29
HCFC1-203ENST00000444191 CTAGE8P0CG41 777 aa13.22□□□□□ -0.29
HCFC1-203ENST00000444191 CASP14P31944 242 aa13.22□□□□□ -0.29
HCFC1-203ENST00000444191 IGHMBP2P38935 993 aaKnown RBP13.22□□□□□ -0.29
HCFC1-203ENST00000444191 TCIRG1Q13488 830 aa13.22□□□□□ -0.29
HCFC1-203ENST00000444191 IFIT1BQ5T764 474 aaKnown RBP13.22□□□□□ -0.29
HCFC1-203ENST00000444191 CTAGE6Q86UF2 777 aa13.22□□□□□ -0.29
HCFC1-203ENST00000444191 METTL16Q86W50 562 aaKnown RBP13.22□□□□□ -0.29
HCFC1-203ENST00000444191 VSTM4Q8IW00 320 aa13.22□□□□□ -0.29
HCFC1-203ENST00000444191 CTAGE4Q8IX94 777 aa13.22□□□□□ -0.29
HCFC1-203ENST00000444191 TANGO6Q9C0B7 1094 aa13.22□□□□□ -0.29
HCFC1-203ENST00000444191 CATIPQ7Z7H3 387 aa13.22□□□□□ -0.29
HCFC1-203ENST00000444191 MB21D2Q8IYB1 491 aaPredicted RBP13.22□□□□□ -0.29
HCFC1-203ENST00000444191 IFNL3Q8IZI9 196 aa13.22□□□□□ -0.29
HCFC1-203ENST00000444191 NOC3LQ8WTT2 800 aaKnown RBP13.22□□□□□ -0.29
HCFC1-203ENST00000444191 HPS5Q9UPZ3 1129 aa13.22□□□□□ -0.29
HCFC1-203ENST00000444191 NEDD4P46934 1319 aa13.22□□□□□ -0.29
HCFC1-203ENST00000444191 FMR1Q06787 632 aaKnown RBP eCLIP13.22□□□□□ -0.298e-7■■■■□ 20.6
HCFC1-203ENST00000444191 PIK3AP1Q6ZUJ8 805 aa13.22□□□□□ -0.29
HCFC1-203ENST00000444191 IQCA1Q86XH1 822 aa13.22□□□□□ -0.29
HCFC1-203ENST00000444191 CTCFLQ8NI51 663 aaPredicted RBP13.22□□□□□ -0.29
HCFC1-203ENST00000444191 PXDNLA1KZ92 1463 aa13.22□□□□□ -0.29
HCFC1-203ENST00000444191 GOLGA6L9A6NEM1 432 aa13.21□□□□□ -0.29
HCFC1-203ENST00000444191 KRT9P35527 623 aa13.21□□□□□ -0.29
HCFC1-203ENST00000444191 RBL2Q08999 1139 aa13.21□□□□□ -0.29
HCFC1-203ENST00000444191 HLFQ16534 295 aa13.21□□□□□ -0.29
HCFC1-203ENST00000444191 RGS22Q8NE09 1264 aa13.21□□□□□ -0.29
HCFC1-203ENST00000444191 ALDH8A1Q9H2A2 487 aaPredicted RBP13.21□□□□□ -0.29
HCFC1-203ENST00000444191 ZHX3Q9H4I2 956 aa13.21□□□□□ -0.29
HCFC1-203ENST00000444191 PEAK1Q9H792 1746 aa13.21□□□□□ -0.29
HCFC1-203ENST00000444191 ZNHIT6Q9NWK9 470 aaKnown RBP13.21□□□□□ -0.29
HCFC1-203ENST00000444191 ZNF446Q9NWS9 450 aa13.21□□□□□ -0.29
HCFC1-203ENST00000444191 SYNRGQ9UMZ2 1314 aa13.21□□□□□ -0.29
HCFC1-203ENST00000444191 MACROD2A1Z1Q3 448 aa13.21□□□□□ -0.29
HCFC1-203ENST00000444191 SYCP1Q15431 976 aa13.21□□□□□ -0.29
HCFC1-203ENST00000444191 IL17RAQ96F46 866 aa13.21□□□□□ -0.29
HCFC1-203ENST00000444191 TRIM47Q96LD4 638 aa13.21□□□□□ -0.29
HCFC1-203ENST00000444191 RUFY1Q96T51 708 aa13.21□□□□□ -0.29
HCFC1-203ENST00000444191 C19orf44Q9H6X5 657 aa13.21□□□□□ -0.29
HCFC1-203ENST00000444191 SUGCTQ9HAC7 445 aa13.21□□□□□ -0.29
HCFC1-203ENST00000444191 EFCAB8A8MWE9 144 aa13.21□□□□□ -0.3
HCFC1-203ENST00000444191 TRIM21P19474 475 aaKnown RBP13.21□□□□□ -0.3
HCFC1-203ENST00000444191 ZSCAN26Q16670 478 aa13.21□□□□□ -0.3
HCFC1-203ENST00000444191 CRACR2AQ9BSW2 395 aa13.21□□□□□ -0.3
HCFC1-203ENST00000444191 ACBD3Q9H3P7 528 aa13.21□□□□□ -0.3
HCFC1-203ENST00000444191 RABL6Q3YEC7 729 aaPredicted RBP13.2□□□□□ -0.3
HCFC1-203ENST00000444191 RILPL1Q5EBL4 403 aa13.2□□□□□ -0.3
HCFC1-203ENST00000444191 FAM47AQ5JRC9 791 aa13.2□□□□□ -0.3
HCFC1-203ENST00000444191 KRT23Q9C075 422 aa13.2□□□□□ -0.3
HCFC1-203ENST00000444191 NOM1Q5C9Z4 860 aaKnown RBP13.2□□□□□ -0.3
HCFC1-203ENST00000444191 CCDC70Q6NSX1 233 aa13.2□□□□□ -0.3
HCFC1-203ENST00000444191 SLC35F6Q8N357 371 aa13.2□□□□□ -0.3
HCFC1-203ENST00000444191 TXLNBQ8N3L3 684 aa13.2□□□□□ -0.3
HCFC1-203ENST00000444191 MLKLQ8NB16 471 aa13.2□□□□□ -0.3
HCFC1-203ENST00000444191 TMEM87BQ96K49 555 aa13.2□□□□□ -0.3
HCFC1-203ENST00000444191 SEC31BQ9NQW1 1179 aa13.2□□□□□ -0.3
HCFC1-203ENST00000444191 TECPR2O15040 1411 aa13.2□□□□□ -0.3
HCFC1-203ENST00000444191 SH2B2O14492 632 aaPredicted RBP13.2□□□□□ -0.3
HCFC1-203ENST00000444191 HSPA2P54652 639 aa13.2□□□□□ -0.3
HCFC1-203ENST00000444191 LONRF2Q1L5Z9 754 aa13.2□□□□□ -0.3
HCFC1-203ENST00000444191 AKNAD1Q5T1N1 836 aa13.2□□□□□ -0.3
HCFC1-203ENST00000444191 DZIP3Q86Y13 1208 aaKnown RBP13.2□□□□□ -0.3
HCFC1-203ENST00000444191 ZNF654Q8IZM8 581 aa13.2□□□□□ -0.3
HCFC1-203ENST00000444191 SPATA5Q8NB90 893 aa13.2□□□□□ -0.3
HCFC1-203ENST00000444191 TSPY2A6NKD2 308 aa13.19□□□□□ -0.3
HCFC1-203ENST00000444191 IKBKBO14920 756 aa13.19□□□□□ -0.3
HCFC1-203ENST00000444191 NCAPHQ15003 741 aa13.19□□□□□ -0.3
HCFC1-203ENST00000444191 SAMD1Q6SPF0 538 aaPredicted RBP13.19□□□□□ -0.3
HCFC1-203ENST00000444191 STX8Q9UNK0 236 aa13.19□□□□□ -0.3
HCFC1-203ENST00000444191 IL2RBP14784 551 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms