RNA–Protein interactions for RNA: ENST00000443878.1

RAB5A-204, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5A, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-204ENST00000443878 AAMPQ13685 434 aa25.52■■□□□ 1.68
RAB5A-204ENST00000443878 FOXP4Q8IVH2 680 aaPredicted RBP25.52■■□□□ 1.68
RAB5A-204ENST00000443878 ERO1AQ96HE7 468 aa25.52■■□□□ 1.68
RAB5A-204ENST00000443878 TBC1D2Q9BYX2 928 aa25.52■■□□□ 1.68
RAB5A-204ENST00000443878 PCDHB15Q9Y5E8 787 aa25.52■■□□□ 1.68
RAB5A-204ENST00000443878 ZHX2Q9Y6X8 837 aa25.52■■□□□ 1.68
RAB5A-204ENST00000443878 SMARCA5O60264 1052 aaPredicted RBP25.51■■□□□ 1.67
RAB5A-204ENST00000443878 PDE6AP16499 860 aa25.51■■□□□ 1.67
RAB5A-204ENST00000443878 ANKRD23Q86SG2 305 aa25.51■■□□□ 1.67
RAB5A-204ENST00000443878 CRBNQ96SW2 442 aa25.51■■□□□ 1.67
RAB5A-204ENST00000443878 TRIM34Q9BYJ4 488 aa25.51■■□□□ 1.67
RAB5A-204ENST00000443878 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.51■■□□□ 1.67
RAB5A-204ENST00000443878 MAGEB6P1A0A0J9YX57 407 aa25.5■■□□□ 1.67
RAB5A-204ENST00000443878 SP3Q02447 781 aa25.5■■□□□ 1.67
RAB5A-204ENST00000443878 METTL16Q86W50 562 aaKnown RBP25.5■■□□□ 1.67
RAB5A-204ENST00000443878 ECHDC1Q9NTX5 307 aa25.5■■□□□ 1.67
RAB5A-204ENST00000443878 AFG3L2Q9Y4W6 797 aa25.5■■□□□ 1.67
RAB5A-204ENST00000443878 CAP2P40123 477 aa25.49■■□□□ 1.67
RAB5A-204ENST00000443878 FASTKD5Q7L8L6 764 aaKnown RBP25.49■■□□□ 1.67
RAB5A-204ENST00000443878 CRACR2BQ8N4Y2 399 aaPredicted RBP25.49■■□□□ 1.67
RAB5A-204ENST00000443878 ZNF532Q9HCE3 1301 aa25.48■■□□□ 1.67
RAB5A-204ENST00000443878 MYH1P12882 1939 aa25.48■■□□□ 1.67
RAB5A-204ENST00000443878 CCDC85CA6NKD9 419 aa25.48■■□□□ 1.67
RAB5A-204ENST00000443878 FAM196BA6NMK8 535 aa25.48■■□□□ 1.67
RAB5A-204ENST00000443878 SLURP2P0DP57 97 aa25.48■■□□□ 1.67
RAB5A-204ENST00000443878 ARHGEF6Q15052 776 aa25.48■■□□□ 1.67
RAB5A-204ENST00000443878 RIOK1Q9BRS2 568 aaKnown RBP25.48■■□□□ 1.67
RAB5A-204ENST00000443878 GINM1Q9NU53 330 aa25.48■■□□□ 1.67
RAB5A-204ENST00000443878 PALD1Q9ULE6 856 aa25.48■■□□□ 1.67
RAB5A-204ENST00000443878 A0A0G2JLL6 359 aaPredicted RBP25.47■■□□□ 1.67
RAB5A-204ENST00000443878 TLR2O60603 784 aa25.47■■□□□ 1.67
RAB5A-204ENST00000443878 ZSCAN25Q6NSZ9 544 aa25.47■■□□□ 1.67
RAB5A-204ENST00000443878 PRRT2Q7Z6L0 340 aaPredicted RBP25.47■■□□□ 1.67
RAB5A-204ENST00000443878 CRNKL1Q9BZJ0 848 aaKnown RBP25.47■■□□□ 1.67
RAB5A-204ENST00000443878 SIPA1L1O43166 1804 aa25.47■■□□□ 1.67
RAB5A-204ENST00000443878 TCRBV5S4A2TA0A5A2 114 aa25.46■■□□□ 1.67
RAB5A-204ENST00000443878 PDHXO00330 501 aa25.46■■□□□ 1.67
RAB5A-204ENST00000443878 FBXO46Q6PJ61 603 aaPredicted RBP25.46■■□□□ 1.67
RAB5A-204ENST00000443878 TTC6Q86TZ1 520 aa25.46■■□□□ 1.67
RAB5A-204ENST00000443878 EDC3Q96F86 508 aaKnown RBP25.46■■□□□ 1.67
RAB5A-204ENST00000443878 SAP30BPQ9UHR5 308 aaKnown RBP25.46■■□□□ 1.67
RAB5A-204ENST00000443878 PHIPQ8WWQ0 1821 aa25.46■■□□□ 1.67
RAB5A-204ENST00000443878 ATAD5Q96QE3 1844 aa25.46■■□□□ 1.67
RAB5A-204ENST00000443878 ADD2P35612 726 aa25.45■■□□□ 1.66
RAB5A-204ENST00000443878 MOGSQ13724 837 aa25.45■■□□□ 1.66
RAB5A-204ENST00000443878 AS3MTQ9HBK9 375 aa25.45■■□□□ 1.66
RAB5A-204ENST00000443878 MYH7P12883 1935 aa25.44■■□□□ 1.66
RAB5A-204ENST00000443878 USP17L5A8MUK1 530 aa25.44■■□□□ 1.66
RAB5A-204ENST00000443878 ASNSP08243 561 aa25.44■■□□□ 1.66
RAB5A-204ENST00000443878 EHD4Q9H223 541 aa25.44■■□□□ 1.66
RAB5A-204ENST00000443878 ZBTB47Q9UFB7 747 aaPredicted RBP25.44■■□□□ 1.66
RAB5A-204ENST00000443878 SLC45A1Q9Y2W3 748 aa25.44■■□□□ 1.66
RAB5A-204ENST00000443878 TRIM17Q9Y577 477 aa25.44■■□□□ 1.66
RAB5A-204ENST00000443878 PTPRFP10586 1907 aa25.43■■□□□ 1.66
RAB5A-204ENST00000443878 UBE3CQ15386 1083 aa25.43■■□□□ 1.66
RAB5A-204ENST00000443878 OTOP1Q7RTM1 612 aa25.43■■□□□ 1.66
RAB5A-204ENST00000443878 ZNF280CQ8ND82 737 aa25.43■■□□□ 1.66
RAB5A-204ENST00000443878 CD99L2Q8TCZ2 262 aa25.43■■□□□ 1.66
RAB5A-204ENST00000443878 PARK7Q99497 189 aaKnown RBP25.43■■□□□ 1.66
RAB5A-204ENST00000443878 TTC41PQ6P2S7 1318 aa25.42■■□□□ 1.66
RAB5A-204ENST00000443878 TRIM75PA6NK02 468 aa25.42■■□□□ 1.66
RAB5A-204ENST00000443878 HDAC1Q13547 482 aaPredicted RBP25.42■■□□□ 1.66
RAB5A-204ENST00000443878 KIF22Q14807 665 aa25.42■■□□□ 1.66
RAB5A-204ENST00000443878 GPAT2Q6NUI2 795 aa25.42■■□□□ 1.66
RAB5A-204ENST00000443878 GCC1Q96CN9 775 aa25.42■■□□□ 1.66
RAB5A-204ENST00000443878 DNAJC18Q9H819 358 aa25.42■■□□□ 1.66
RAB5A-204ENST00000443878 EFCC1Q9HA90 598 aa25.42■■□□□ 1.66
RAB5A-204ENST00000443878 SERPINB13Q9UIV8 391 aa25.42■■□□□ 1.66
RAB5A-204ENST00000443878 HPS5Q9UPZ3 1129 aa25.42■■□□□ 1.66
RAB5A-204ENST00000443878 ERC2O15083 957 aa25.41■■□□□ 1.66
RAB5A-204ENST00000443878 GADL1Q6ZQY3 521 aa25.41■■□□□ 1.66
RAB5A-204ENST00000443878 NAV1Q8NEY1 1877 aa25.4■■□□□ 1.66
RAB5A-204ENST00000443878 RRP1BQ14684 758 aaKnown RBP25.4■■□□□ 1.66
RAB5A-204ENST00000443878 C17orf99Q6UX52 265 aa25.4■■□□□ 1.66
RAB5A-204ENST00000443878 PROCA1Q8NCQ7 364 aaPredicted RBP25.4■■□□□ 1.66
RAB5A-204ENST00000443878 TAOK2Q9UL54 1235 aa25.4■■□□□ 1.66
RAB5A-204ENST00000443878 POLR3DP05423 398 aaPredicted RBP25.39■■□□□ 1.66
RAB5A-204ENST00000443878 SPP2Q13103 211 aa25.39■■□□□ 1.66
RAB5A-204ENST00000443878 LCORLQ8N3X6 602 aa25.39■■□□□ 1.66
RAB5A-204ENST00000443878 WDR18Q9BV38 432 aa25.39■■□□□ 1.66
RAB5A-204ENST00000443878 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.39■■□□□ 1.66
RAB5A-204ENST00000443878 AGTPBP1Q9UPW5 1226 aa25.39■■□□□ 1.66
RAB5A-204ENST00000443878 DDX60LQ5H9U9 1706 aaKnown RBP25.39■■□□□ 1.65
RAB5A-204ENST00000443878 SLC4A8Q2Y0W8 1093 aa25.38■■□□□ 1.65
RAB5A-204ENST00000443878 LRRFIP1Q32MZ4 808 aaKnown RBP25.38■■□□□ 1.65
RAB5A-204ENST00000443878 TATDN1Q6P1N9 297 aa25.38■■□□□ 1.65
RAB5A-204ENST00000443878 CCDC84Q86UT8 332 aaPredicted RBP25.38■■□□□ 1.65
RAB5A-204ENST00000443878 KBTBD3Q8NAB2 608 aa25.38■■□□□ 1.65
RAB5A-204ENST00000443878 ATP8A2Q9NTI2 1148 aa25.38■■□□□ 1.65
RAB5A-204ENST00000443878 MCM9Q9NXL9 1143 aa25.38■■□□□ 1.65
RAB5A-204ENST00000443878 ADGRA2Q96PE1 1338 aa25.37■■□□□ 1.65
RAB5A-204ENST00000443878 MBD4O95243 580 aa25.37■■□□□ 1.65
RAB5A-204ENST00000443878 GNRH1P01148 92 aa25.37■■□□□ 1.65
RAB5A-204ENST00000443878 LACTBP83111 547 aaPredicted RBP25.37■■□□□ 1.65
RAB5A-204ENST00000443878 PABPC4Q13310 644 aaKnown RBP eCLIP25.37■■□□□ 1.65
RAB5A-204ENST00000443878 SH3D19Q5HYK7 790 aa25.37■■□□□ 1.65
RAB5A-204ENST00000443878 DDRGK1Q96HY6 314 aa25.37■■□□□ 1.65
RAB5A-204ENST00000443878 ARMT1Q9H993 441 aa25.37■■□□□ 1.65
RAB5A-204ENST00000443878 DCP1AQ9NPI6 582 aaPredicted RBP25.37■■□□□ 1.65
RAB5A-204ENST00000443878 PNMA3Q9UL41 463 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms