RNA–Protein interactions for RNA: ENST00000442572.1

CDCA4P3-201, Transcript of cell division cycle associated 4 pseudogene 3, humanhuman

BASIC

Gene CDCA4P3, Length 689 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P3-201ENST00000442572 METTL16Q86W50 562 aaKnown RBP15.17■□□□□ 0.02
CDCA4P3-201ENST00000442572 SMC5Q8IY18 1101 aa15.17■□□□□ 0.02
CDCA4P3-201ENST00000442572 SCYL3Q8IZE3 742 aa15.17■□□□□ 0.02
CDCA4P3-201ENST00000442572 KBTBD3Q8NAB2 608 aa15.17■□□□□ 0.02
CDCA4P3-201ENST00000442572 OTUD5Q96G74 571 aa15.17■□□□□ 0.02
CDCA4P3-201ENST00000442572 MS4A4AQ96JQ5 239 aa15.17■□□□□ 0.02
CDCA4P3-201ENST00000442572 TBC1D2Q9BYX2 928 aa15.17■□□□□ 0.02
CDCA4P3-201ENST00000442572 CRNKL1Q9BZJ0 848 aaKnown RBP15.17■□□□□ 0.02
CDCA4P3-201ENST00000442572 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.17■□□□□ 0.02
CDCA4P3-201ENST00000442572 PICK1Q9NRD5 415 aa15.17■□□□□ 0.02
CDCA4P3-201ENST00000442572 GINM1Q9NU53 330 aa15.17■□□□□ 0.02
CDCA4P3-201ENST00000442572 BAZ2AQ9UIF9 1905 aaKnown RBP15.17■□□□□ 0.02
CDCA4P3-201ENST00000442572 CETPP11597 493 aa15.16■□□□□ 0.02
CDCA4P3-201ENST00000442572 MX1P20591 662 aa15.16■□□□□ 0.02
CDCA4P3-201ENST00000442572 USP5P45974 858 aa15.16■□□□□ 0.02
CDCA4P3-201ENST00000442572 SNAPC2Q13487 334 aa15.16■□□□□ 0.02
CDCA4P3-201ENST00000442572 MAPKAPK5Q8IW41 473 aa15.16■□□□□ 0.02
CDCA4P3-201ENST00000442572 MIGA1Q8NAN2 632 aa15.16■□□□□ 0.02
CDCA4P3-201ENST00000442572 CXCL11O14625 94 aa15.15■□□□□ 0.02
CDCA4P3-201ENST00000442572 ZFYP08048 801 aaPredicted RBP15.15■□□□□ 0.02
CDCA4P3-201ENST00000442572 PPP4R3CPQ6ZMV5 832 aa15.15■□□□□ 0.02
CDCA4P3-201ENST00000442572 TTC6Q86TZ1 520 aa15.15■□□□□ 0.02
CDCA4P3-201ENST00000442572 TICAM2Q86XR7 235 aa15.15■□□□□ 0.02
CDCA4P3-201ENST00000442572 EDC3Q96F86 508 aaKnown RBP15.15■□□□□ 0.02
CDCA4P3-201ENST00000442572 EHD4Q9H223 541 aa15.15■□□□□ 0.02
CDCA4P3-201ENST00000442572 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.15■□□□□ 0.02
CDCA4P3-201ENST00000442572 STAP2Q9UGK3 403 aa15.15■□□□□ 0.02
CDCA4P3-201ENST00000442572 KCNH4Q9UQ05 1017 aa15.15■□□□□ 0.02
CDCA4P3-201ENST00000442572 SALL3Q9BXA9 1300 aa15.15■□□□□ 0.02
CDCA4P3-201ENST00000442572 CCL15-CCL14A0A0B4J2E2 113 aa15.14■□□□□ 0.01
CDCA4P3-201ENST00000442572 IGF2BP3O00425 579 aaKnown RBP eCLIP15.14■□□□□ 0.01
CDCA4P3-201ENST00000442572 IRF6O14896 467 aa15.14■□□□□ 0.01
CDCA4P3-201ENST00000442572 CAP2P40123 477 aa15.14■□□□□ 0.01
CDCA4P3-201ENST00000442572 CCL15Q16663 113 aa15.14■□□□□ 0.01
CDCA4P3-201ENST00000442572 PI4K2BQ8TCG2 481 aa15.14■□□□□ 0.01
CDCA4P3-201ENST00000442572 CNKSR2Q8WXI2 1034 aa15.14■□□□□ 0.01
CDCA4P3-201ENST00000442572 TRIM34Q9BYJ4 488 aa15.14■□□□□ 0.01
CDCA4P3-201ENST00000442572 ATP8A2Q9NTI2 1148 aa15.14■□□□□ 0.01
CDCA4P3-201ENST00000442572 TSKSQ9UJT2 592 aa15.14■□□□□ 0.01
CDCA4P3-201ENST00000442572 PALD1Q9ULE6 856 aa15.14■□□□□ 0.01
CDCA4P3-201ENST00000442572 LOC285556D6RIA3 1793 aa15.13■□□□□ 0.01
CDCA4P3-201ENST00000442572 PTPRAP18433 802 aa15.13■□□□□ 0.01
CDCA4P3-201ENST00000442572 TNS4Q8IZW8 715 aa15.13■□□□□ 0.01
CDCA4P3-201ENST00000442572 CRACR2BQ8N4Y2 399 aaPredicted RBP15.13■□□□□ 0.01
CDCA4P3-201ENST00000442572 BRI3BPQ8WY22 251 aa15.13■□□□□ 0.01
CDCA4P3-201ENST00000442572 GPR25O00155 361 aa15.12■□□□□ 0.01
CDCA4P3-201ENST00000442572 DDRGK1Q96HY6 314 aa15.12■□□□□ 0.01
CDCA4P3-201ENST00000442572 PTPN18Q99952 460 aa15.12■□□□□ 0.01
CDCA4P3-201ENST00000442572 SERPINB13Q9UIV8 391 aa15.12■□□□□ 0.01
CDCA4P3-201ENST00000442572 RNF113AO15541 343 aaKnown RBP15.11■□□□□ 0.01
CDCA4P3-201ENST00000442572 TBC1D8O95759 1140 aa15.11■□□□□ 0.01
CDCA4P3-201ENST00000442572 ASNSP08243 561 aa15.11■□□□□ 0.01
CDCA4P3-201ENST00000442572 PDE1AP54750 535 aa15.11■□□□□ 0.01
CDCA4P3-201ENST00000442572 FASTKD5Q7L8L6 764 aaKnown RBP15.11■□□□□ 0.01
CDCA4P3-201ENST00000442572 ANKRD23Q86SG2 305 aa15.11■□□□□ 0.01
CDCA4P3-201ENST00000442572 LCORLQ8N3X6 602 aa15.11■□□□□ 0.01
CDCA4P3-201ENST00000442572 APPBP2Q92624 585 aa15.11■□□□□ 0.01
CDCA4P3-201ENST00000442572 AFG3L2Q9Y4W6 797 aa15.11■□□□□ 0.01
CDCA4P3-201ENST00000442572 ZHX2Q9Y6X8 837 aa15.11■□□□□ 0.01
CDCA4P3-201ENST00000442572 MBD4O95243 580 aa15.1■□□□□ 0.01
CDCA4P3-201ENST00000442572 IGHDP01880 384 aa15.1■□□□□ 0.01
CDCA4P3-201ENST00000442572 NUCB1Q02818 461 aa15.1■□□□□ 0.01
CDCA4P3-201ENST00000442572 TSHZ3Q63HK5 1081 aa15.1■□□□□ 0.01
CDCA4P3-201ENST00000442572 CHD1LQ86WJ1 897 aa15.1■□□□□ 0.01
CDCA4P3-201ENST00000442572 AMOTL1Q8IY63 956 aa15.1■□□□□ 0.01
CDCA4P3-201ENST00000442572 OTUD7AQ8TE49 926 aaPredicted RBP15.1■□□□□ 0.01
CDCA4P3-201ENST00000442572 DNAJC18Q9H819 358 aa15.1■□□□□ 0.01
CDCA4P3-201ENST00000442572 ARMT1Q9H993 441 aa15.1■□□□□ 0.01
CDCA4P3-201ENST00000442572 AS3MTQ9HBK9 375 aa15.1■□□□□ 0.01
CDCA4P3-201ENST00000442572 ZFYVE28Q9HCC9 887 aa15.1■□□□□ 0.01
CDCA4P3-201ENST00000442572 DCP1AQ9NPI6 582 aaPredicted RBP15.1■□□□□ 0.01
CDCA4P3-201ENST00000442572 MCM9Q9NXL9 1143 aa15.1■□□□□ 0.01
CDCA4P3-201ENST00000442572 SAP30BPQ9UHR5 308 aaKnown RBP15.1■□□□□ 0.01
CDCA4P3-201ENST00000442572 A0A0G2JLL6 359 aaPredicted RBP15.09■□□□□ 0.01
CDCA4P3-201ENST00000442572 FAM196BA6NMK8 535 aa15.09■□□□□ 0.01
CDCA4P3-201ENST00000442572 USP17L5A8MUK1 530 aa15.09■□□□□ 0.01
CDCA4P3-201ENST00000442572 FKTNO75072 461 aa15.09■□□□□ 0.01
CDCA4P3-201ENST00000442572 POLR3DP05423 398 aaPredicted RBP15.09■□□□□ 0.01
CDCA4P3-201ENST00000442572 GNAT2P19087 354 aa15.09■□□□□ 0.01
CDCA4P3-201ENST00000442572 CRHR2Q13324 411 aa15.09■□□□□ 0.01
CDCA4P3-201ENST00000442572 TAF1CQ15572 869 aaPredicted RBP15.09■□□□□ 0.01
CDCA4P3-201ENST00000442572 TATDN1Q6P1N9 297 aa15.09■□□□□ 0.01
CDCA4P3-201ENST00000442572 GIMAP6Q6P9H5 292 aa15.09■□□□□ 0.01
CDCA4P3-201ENST00000442572 PRRT2Q7Z6L0 340 aaPredicted RBP15.09■□□□□ 0.01
CDCA4P3-201ENST00000442572 ZNF296Q8WUU4 475 aaPredicted RBP15.09■□□□□ 0.01
CDCA4P3-201ENST00000442572 EVI5LQ96CN4 794 aa15.09■□□□□ 0.01
CDCA4P3-201ENST00000442572 OSBPL3Q9H4L5 887 aa15.09■□□□□ 0.01
CDCA4P3-201ENST00000442572 SLC45A1Q9Y2W3 748 aa15.09■□□□□ 0.01
CDCA4P3-201ENST00000442572 BTBD19C9JJ37 291 aa15.08■□□□□ 0
CDCA4P3-201ENST00000442572 SLURP2P0DP57 97 aa15.08■□□□□ 0
CDCA4P3-201ENST00000442572 GABPAQ06546 454 aa15.08■□□□□ 0
CDCA4P3-201ENST00000442572 PKN2Q16513 984 aaKnown RBP15.08■□□□□ 0
CDCA4P3-201ENST00000442572 FAM43AQ8N2R8 423 aa15.08■□□□□ 0
CDCA4P3-201ENST00000442572 ZNF280CQ8ND82 737 aa15.08■□□□□ 0
CDCA4P3-201ENST00000442572 SDR42E1Q8WUS8 393 aa15.08■□□□□ 0
CDCA4P3-201ENST00000442572 FSD1Q9BTV5 496 aa15.08■□□□□ 0
CDCA4P3-201ENST00000442572 WDR18Q9BV38 432 aa15.08■□□□□ 0
CDCA4P3-201ENST00000442572 LNPKQ9C0E8 428 aa15.08■□□□□ 0
CDCA4P3-201ENST00000442572 PUS7LQ9H0K6 701 aaKnown RBP15.08■□□□□ 0
CDCA4P3-201ENST00000442572 SWAP70Q9UH65 585 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms