RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 INPP5BP32019 993 aa18.1■□□□□ 0.49
CSNK1E-210ENST00000442216 INHBEP58166 350 aa18.1■□□□□ 0.49
CSNK1E-210ENST00000442216 SLFNL1Q499Z3 407 aa18.1■□□□□ 0.49
CSNK1E-210ENST00000442216 TTC6Q86TZ1 520 aa18.1■□□□□ 0.49
CSNK1E-210ENST00000442216 ZKSCAN4Q969J2 545 aaPredicted RBP18.1■□□□□ 0.49
CSNK1E-210ENST00000442216 EHD4Q9H223 541 aa18.1■□□□□ 0.49
CSNK1E-210ENST00000442216 ARMT1Q9H993 441 aa18.1■□□□□ 0.49
CSNK1E-210ENST00000442216 TAOK2Q9UL54 1235 aa18.1■□□□□ 0.49
CSNK1E-210ENST00000442216 PALD1Q9ULE6 856 aa18.1■□□□□ 0.49
CSNK1E-210ENST00000442216 PHIPQ8WWQ0 1821 aa18.09■□□□□ 0.49
CSNK1E-210ENST00000442216 MANSC4A6NHS7 340 aaPredicted RBP18.09■□□□□ 0.49
CSNK1E-210ENST00000442216 CHGBP05060 677 aa18.09■□□□□ 0.49
CSNK1E-210ENST00000442216 TM4SF4P48230 202 aa18.09■□□□□ 0.49
CSNK1E-210ENST00000442216 SREBF2Q12772 1141 aa18.09■□□□□ 0.49
CSNK1E-210ENST00000442216 CENPQQ7L2Z9 268 aaPredicted RBP18.09■□□□□ 0.49
CSNK1E-210ENST00000442216 OSBP2Q969R2 916 aa18.09■□□□□ 0.49
CSNK1E-210ENST00000442216 OPTNQ96CV9 577 aa18.09■□□□□ 0.49
CSNK1E-210ENST00000442216 DCP1AQ9NPI6 582 aaPredicted RBP18.09■□□□□ 0.49
CSNK1E-210ENST00000442216 GNAT2P19087 354 aa18.08■□□□□ 0.48
CSNK1E-210ENST00000442216 PPATQ06203 517 aa18.08■□□□□ 0.48
CSNK1E-210ENST00000442216 ZMYM1Q5SVZ6 1142 aa18.08■□□□□ 0.48
CSNK1E-210ENST00000442216 SCYL3Q8IZE3 742 aa18.08■□□□□ 0.48
CSNK1E-210ENST00000442216 SDR42E1Q8WUS8 393 aa18.08■□□□□ 0.48
CSNK1E-210ENST00000442216 STRBPQ96SI9 672 aaKnown RBP18.08■□□□□ 0.48
CSNK1E-210ENST00000442216 TRIM6-TRIM34B2RNG4 842 aa18.07■□□□□ 0.48
CSNK1E-210ENST00000442216 PDE4AP27815 886 aa18.07■□□□□ 0.48
CSNK1E-210ENST00000442216 GJA5P36382 358 aa18.07■□□□□ 0.48
CSNK1E-210ENST00000442216 PPIL2Q13356 520 aa18.07■□□□□ 0.48
CSNK1E-210ENST00000442216 ERICH6BQ5W0A0 696 aa18.07■□□□□ 0.48
CSNK1E-210ENST00000442216 GIMAP6Q6P9H5 292 aa18.07■□□□□ 0.48
CSNK1E-210ENST00000442216 CRACR2BQ8N4Y2 399 aaPredicted RBP18.07■□□□□ 0.48
CSNK1E-210ENST00000442216 DDRGK1Q96HY6 314 aa18.07■□□□□ 0.48
CSNK1E-210ENST00000442216 TRIM34Q9BYJ4 488 aa18.07■□□□□ 0.48
CSNK1E-210ENST00000442216 GINM1Q9NU53 330 aa18.07■□□□□ 0.48
CSNK1E-210ENST00000442216 MCM9Q9NXL9 1143 aa18.07■□□□□ 0.48
CSNK1E-210ENST00000442216 SAGE1Q9NXZ1 904 aa18.07■□□□□ 0.48
CSNK1E-210ENST00000442216 SAP30BPQ9UHR5 308 aaKnown RBP18.07■□□□□ 0.48
CSNK1E-210ENST00000442216 SLC4A4Q9Y6R1 1079 aa18.07■□□□□ 0.48
CSNK1E-210ENST00000442216 PTPRFP10586 1907 aa18.07■□□□□ 0.48
CSNK1E-210ENST00000442216 GPAA1O43292 621 aa18.06■□□□□ 0.48
CSNK1E-210ENST00000442216 POLR3DP05423 398 aaPredicted RBP18.06■□□□□ 0.48
CSNK1E-210ENST00000442216 GTF2A2P52657 109 aa18.06■□□□□ 0.48
CSNK1E-210ENST00000442216 PICK1Q9NRD5 415 aa18.06■□□□□ 0.48
CSNK1E-210ENST00000442216 SERPINB13Q9UIV8 391 aa18.06■□□□□ 0.48
CSNK1E-210ENST00000442216 TESPA1A2RU30 521 aaPredicted RBP18.05■□□□□ 0.48
CSNK1E-210ENST00000442216 PRKAB2O43741 272 aa18.05■□□□□ 0.48
CSNK1E-210ENST00000442216 CAP2P40123 477 aa18.05■□□□□ 0.48
CSNK1E-210ENST00000442216 MKRN3Q13064 507 aaKnown RBP18.05■□□□□ 0.48
CSNK1E-210ENST00000442216 AMOTL1Q8IY63 956 aa18.05■□□□□ 0.48
CSNK1E-210ENST00000442216 RILPL2Q969X0 211 aa18.05■□□□□ 0.48
CSNK1E-210ENST00000442216 OTUD5Q96G74 571 aa18.05■□□□□ 0.48
CSNK1E-210ENST00000442216 MS4A4AQ96JQ5 239 aa18.05■□□□□ 0.48
CSNK1E-210ENST00000442216 TBC1D2Q9BYX2 928 aa18.05■□□□□ 0.48
CSNK1E-210ENST00000442216 DNAJC18Q9H819 358 aa18.05■□□□□ 0.48
CSNK1E-210ENST00000442216 HELLSQ9NRZ9 838 aa18.05■□□□□ 0.48
CSNK1E-210ENST00000442216 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.05■□□□□ 0.48
CSNK1E-210ENST00000442216 FAM196BA6NMK8 535 aa18.04■□□□□ 0.48
CSNK1E-210ENST00000442216 M0R2C6 588 aa18.04■□□□□ 0.48
CSNK1E-210ENST00000442216 SLURP2P0DP57 97 aa18.04■□□□□ 0.48
CSNK1E-210ENST00000442216 PTPRAP18433 802 aa18.04■□□□□ 0.48
CSNK1E-210ENST00000442216 CTCFP49711 727 aaPredicted RBP18.04■□□□□ 0.48
CSNK1E-210ENST00000442216 TATDN1Q6P1N9 297 aa18.04■□□□□ 0.48
CSNK1E-210ENST00000442216 CNKSR2Q8WXI2 1034 aa18.04■□□□□ 0.48
CSNK1E-210ENST00000442216 KCNH4Q9UQ05 1017 aa18.04■□□□□ 0.48
CSNK1E-210ENST00000442216 GSG1L2A8MUP6 293 aa18.03■□□□□ 0.48
CSNK1E-210ENST00000442216 PATL2C9JE40 543 aaKnown RBP18.03■□□□□ 0.48
CSNK1E-210ENST00000442216 IRF6O14896 467 aa18.03■□□□□ 0.48
CSNK1E-210ENST00000442216 FOXN1O15353 648 aa18.03■□□□□ 0.48
CSNK1E-210ENST00000442216 ALDH1A1P00352 501 aa18.03■□□□□ 0.48
CSNK1E-210ENST00000442216 PLCD1P51178 756 aa18.03■□□□□ 0.48
CSNK1E-210ENST00000442216 GABPAQ06546 454 aa18.03■□□□□ 0.48
CSNK1E-210ENST00000442216 SNAPC2Q13487 334 aa18.03■□□□□ 0.48
CSNK1E-210ENST00000442216 SBK1Q52WX2 424 aa18.03■□□□□ 0.48
CSNK1E-210ENST00000442216 TTC22Q5TAA0 569 aa18.03■□□□□ 0.48
CSNK1E-210ENST00000442216 OTUD7BQ6GQQ9 843 aa18.03■□□□□ 0.48
CSNK1E-210ENST00000442216 CCDC136Q96JN2 1154 aa18.03■□□□□ 0.48
CSNK1E-210ENST00000442216 ARPP21Q9UBL0 812 aaPredicted RBP18.03■□□□□ 0.48
CSNK1E-210ENST00000442216 HIP1O00291 1037 aa18.02■□□□□ 0.48
CSNK1E-210ENST00000442216 CXCL11O14625 94 aa18.02■□□□□ 0.48
CSNK1E-210ENST00000442216 ASNSP08243 561 aa18.02■□□□□ 0.48
CSNK1E-210ENST00000442216 CETPP11597 493 aa18.02■□□□□ 0.48
CSNK1E-210ENST00000442216 C12orf60Q5U649 245 aa18.02■□□□□ 0.48
CSNK1E-210ENST00000442216 IFNL1Q8IU54 200 aa18.02■□□□□ 0.48
CSNK1E-210ENST00000442216 SEC62Q99442 399 aaKnown RBP18.02■□□□□ 0.48
CSNK1E-210ENST00000442216 CFHR5Q9BXR6 569 aa18.02■□□□□ 0.48
CSNK1E-210ENST00000442216 RNF186Q9NXI6 227 aa18.02■□□□□ 0.48
CSNK1E-210ENST00000442216 SWAP70Q9UH65 585 aa18.02■□□□□ 0.48
CSNK1E-210ENST00000442216 USP17L12C9JPN9 530 aa18.01■□□□□ 0.47
CSNK1E-210ENST00000442216 USP17L21D6R901 530 aa18.01■□□□□ 0.47
CSNK1E-210ENST00000442216 SDSP20132 328 aa18.01■□□□□ 0.47
CSNK1E-210ENST00000442216 SLC4A8Q2Y0W8 1093 aa18.01■□□□□ 0.47
CSNK1E-210ENST00000442216 MCMDC2Q4G0Z9 681 aa18.01■□□□□ 0.47
CSNK1E-210ENST00000442216 CTR9Q6PD62 1173 aa18.01■□□□□ 0.47
CSNK1E-210ENST00000442216 ZCCHC17Q9NP64 241 aaKnown RBP18.01■□□□□ 0.47
CSNK1E-210ENST00000442216 AFG3L2Q9Y4W6 797 aa18.01■□□□□ 0.47
CSNK1E-210ENST00000442216 ZHX2Q9Y6X8 837 aa18.01■□□□□ 0.47
CSNK1E-210ENST00000442216 CCL15-CCL14A0A0B4J2E2 113 aa18■□□□□ 0.47
CSNK1E-210ENST00000442216 USP17L5A8MUK1 530 aa18■□□□□ 0.47
CSNK1E-210ENST00000442216 TRPA1O75762 1119 aa18■□□□□ 0.47
CSNK1E-210ENST00000442216 HSPA8P11142 646 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms