RNA–Protein interactions for RNA: ENST00000441517.6

SCAP-207, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,748 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-207ENST00000441517 FANCBQ8NB91 859 aa17.17■□□□□ 0.34
SCAP-207ENST00000441517 RNF41Q9H4P4 317 aaPredicted RBP17.17■□□□□ 0.34
SCAP-207ENST00000441517 ST7Q9NRC1 585 aa17.17■□□□□ 0.34
SCAP-207ENST00000441517 PAXBP1Q9Y5B6 917 aa17.17■□□□□ 0.34
SCAP-207ENST00000441517 CCDC194A0A1B0GVG4 234 aa17.17■□□□□ 0.34
SCAP-207ENST00000441517 RHOXF2BP0C7M4 288 aa17.17■□□□□ 0.34
SCAP-207ENST00000441517 PRR29P0C7W0 189 aa17.17■□□□□ 0.34
SCAP-207ENST00000441517 GTF2F1P35269 517 aaKnown RBP eCLIP17.17■□□□□ 0.348e-7■■■□□ 18.7
SCAP-207ENST00000441517 RBM5P52756 815 aaKnown RBP eCLIP17.17■□□□□ 0.34
SCAP-207ENST00000441517 NOSTRINQ8IVI9 506 aa17.17■□□□□ 0.34
SCAP-207ENST00000441517 RHOXF2Q9BQY4 288 aa17.17■□□□□ 0.34
SCAP-207ENST00000441517 IRX2Q9BZI1 471 aaPredicted RBP17.17■□□□□ 0.34
SCAP-207ENST00000441517 CSRNP2Q9H175 543 aa17.17■□□□□ 0.34
SCAP-207ENST00000441517 EVX2Q03828 476 aa17.16■□□□□ 0.34
SCAP-207ENST00000441517 SLC39A14Q15043 492 aa17.16■□□□□ 0.34
SCAP-207ENST00000441517 ERFEQ4G0M1 354 aa17.16■□□□□ 0.34
SCAP-207ENST00000441517 ILDR1Q86SU0 546 aaPredicted RBP17.16■□□□□ 0.34
SCAP-207ENST00000441517 HPS5Q9UPZ3 1129 aa17.16■□□□□ 0.34
SCAP-207ENST00000441517 RIPOR2Q9Y4F9 1068 aa17.16■□□□□ 0.34
SCAP-207ENST00000441517 LOC102724428A0A0B4J2F2 783 aa17.16■□□□□ 0.34
SCAP-207ENST00000441517 CASP7P55210 303 aa17.16■□□□□ 0.34
SCAP-207ENST00000441517 SIK1P57059 783 aa17.16■□□□□ 0.34
SCAP-207ENST00000441517 POSTNQ15063 836 aa17.16■□□□□ 0.34
SCAP-207ENST00000441517 MEX3CQ5U5Q3 659 aaKnown RBP17.16■□□□□ 0.34
SCAP-207ENST00000441517 SHC4Q6S5L8 630 aa17.16■□□□□ 0.34
SCAP-207ENST00000441517 ZSCAN29Q8IWY8 852 aaPredicted RBP17.16■□□□□ 0.34
SCAP-207ENST00000441517 CAGE1Q8TC20 777 aa17.16■□□□□ 0.34
SCAP-207ENST00000441517 SETDB2Q96T68 719 aa17.16■□□□□ 0.34
SCAP-207ENST00000441517 CCDC87Q9NVE4 849 aa17.16■□□□□ 0.34
SCAP-207ENST00000441517 SH2B2O14492 632 aaPredicted RBP17.15■□□□□ 0.34
SCAP-207ENST00000441517 TMCO3Q6UWJ1 677 aa17.15■□□□□ 0.34
SCAP-207ENST00000441517 MAPKAPK5Q8IW41 473 aa17.15■□□□□ 0.34
SCAP-207ENST00000441517 DYNLL2Q96FJ2 89 aa17.15■□□□□ 0.34
SCAP-207ENST00000441517 ISCA1Q9BUE6 129 aa17.15■□□□□ 0.34
SCAP-207ENST00000441517 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.15■□□□□ 0.34
SCAP-207ENST00000441517 ARGLU1Q9NWB6 273 aaPredicted RBP17.15■□□□□ 0.34
SCAP-207ENST00000441517 CTNND2Q9UQB3 1225 aa17.15■□□□□ 0.34
SCAP-207ENST00000441517 RAD51AP2Q09MP3 1159 aa17.15■□□□□ 0.34
SCAP-207ENST00000441517 NLRP3Q96P20 1036 aa17.15■□□□□ 0.34
SCAP-207ENST00000441517 PSMB7Q99436 277 aa17.15■□□□□ 0.34
SCAP-207ENST00000441517 KAT14Q9H8E8 782 aa17.15■□□□□ 0.34
SCAP-207ENST00000441517 TAB2Q9NYJ8 693 aa17.15■□□□□ 0.34
SCAP-207ENST00000441517 SEC31AO94979 1220 aaKnown RBP17.14■□□□□ 0.34
SCAP-207ENST00000441517 IPO7O95373 1038 aaKnown RBP17.14■□□□□ 0.34
SCAP-207ENST00000441517 YEATS4O95619 227 aa17.14■□□□□ 0.34
SCAP-207ENST00000441517 UBA7P41226 1012 aa17.14■□□□□ 0.34
SCAP-207ENST00000441517 DIXDC1Q155Q3 683 aa17.14■□□□□ 0.34
SCAP-207ENST00000441517 CCDC178Q5BJE1 867 aa17.14■□□□□ 0.34
SCAP-207ENST00000441517 NOM1Q5C9Z4 860 aaKnown RBP17.14■□□□□ 0.34
SCAP-207ENST00000441517 CAPZA3Q96KX2 299 aa17.14■□□□□ 0.34
SCAP-207ENST00000441517 BAG1Q99933 345 aaPredicted RBP17.14■□□□□ 0.34
SCAP-207ENST00000441517 UTYO14607 1347 aa17.14■□□□□ 0.33
SCAP-207ENST00000441517 CMA1P23946 247 aa17.14■□□□□ 0.33
SCAP-207ENST00000441517 TXLNAP40222 546 aa17.14■□□□□ 0.33
SCAP-207ENST00000441517 TNNT3P45378 269 aaPredicted RBP17.14■□□□□ 0.33
SCAP-207ENST00000441517 NCBP1Q09161 790 aaKnown RBP17.14■□□□□ 0.33
SCAP-207ENST00000441517 PLA2G4DQ86XP0 818 aa17.14■□□□□ 0.33
SCAP-207ENST00000441517 SOS2Q07890 1332 aaPredicted RBP17.14■□□□□ 0.33
SCAP-207ENST00000441517 ZNF652Q9Y2D9 606 aa17.14■□□□□ 0.33
SCAP-207ENST00000441517 ZMYM6O95789 1325 aa17.14■□□□□ 0.33
SCAP-207ENST00000441517 TMEM87BQ96K49 555 aa17.13■□□□□ 0.33
SCAP-207ENST00000441517 MROH7-TTC4A0A0A0MT08 1334 aa17.13■□□□□ 0.33
SCAP-207ENST00000441517 CAVIN2O95810 425 aa17.13■□□□□ 0.33
SCAP-207ENST00000441517 PRDX5P30044 214 aa17.13■□□□□ 0.33
SCAP-207ENST00000441517 GUCA1BQ9UMX6 200 aa17.13■□□□□ 0.33
SCAP-207ENST00000441517 ZNF569Q5MCW4 686 aa17.13■□□□□ 0.33
SCAP-207ENST00000441517 KRBA2Q6ZNG9 492 aa17.13■□□□□ 0.33
SCAP-207ENST00000441517 CNNM2Q9H8M5 875 aa17.13■□□□□ 0.33
SCAP-207ENST00000441517 TSPY3P0CV98 308 aa17.12■□□□□ 0.33
SCAP-207ENST00000441517 TSPY8P0CW00 308 aa17.12■□□□□ 0.33
SCAP-207ENST00000441517 LETM2Q2VYF4 491 aa17.12■□□□□ 0.33
SCAP-207ENST00000441517 SLC44A5Q8NCS7 719 aa17.12■□□□□ 0.33
SCAP-207ENST00000441517 CELF1Q92879 486 aaKnown RBP17.12■□□□□ 0.33
SCAP-207ENST00000441517 EPB41L4AQ9HCS5 686 aaPredicted RBP17.12■□□□□ 0.33
SCAP-207ENST00000441517 CIAO1O76071 339 aa17.12■□□□□ 0.33
SCAP-207ENST00000441517 CYP19A1P11511 503 aaPredicted RBP17.12■□□□□ 0.33
SCAP-207ENST00000441517 CCDC150Q8NCX0 1101 aa17.12■□□□□ 0.33
SCAP-207ENST00000441517 CCDC102AQ96A19 550 aa17.12■□□□□ 0.33
SCAP-207ENST00000441517 CDK5RAP3Q96JB5 506 aa17.12■□□□□ 0.33
SCAP-207ENST00000441517 USP17L8P0C7I0 530 aa17.12■□□□□ 0.33
SCAP-207ENST00000441517 TFAP4Q01664 338 aa17.12■□□□□ 0.33
SCAP-207ENST00000441517 MTF1Q14872 753 aa17.12■□□□□ 0.33
SCAP-207ENST00000441517 TSGA10IPQ3SY00 556 aa17.12■□□□□ 0.33
SCAP-207ENST00000441517 IGSF22Q8N9C0 903 aa17.12■□□□□ 0.33
SCAP-207ENST00000441517 TGFBRAP1Q8WUH2 860 aa17.12■□□□□ 0.33
SCAP-207ENST00000441517 CEP131Q9UPN4 1083 aa17.12■□□□□ 0.33
SCAP-207ENST00000441517 UBN2Q6ZU65 1347 aa17.12■□□□□ 0.33
SCAP-207ENST00000441517 NEMFO60524 1076 aa17.11■□□□□ 0.33
SCAP-207ENST00000441517 KRT2P35908 639 aa17.11■□□□□ 0.33
SCAP-207ENST00000441517 ARID5AQ03989 594 aa17.11■□□□□ 0.33
SCAP-207ENST00000441517 PDE4BQ07343 736 aa17.11■□□□□ 0.33
SCAP-207ENST00000441517 ARMCX5Q6P1M9 558 aa17.11■□□□□ 0.33
SCAP-207ENST00000441517 DHX37Q8IY37 1157 aaKnown RBP17.11■□□□□ 0.33
SCAP-207ENST00000441517 RABEP2Q9H5N1 569 aa17.11■□□□□ 0.33
SCAP-207ENST00000441517 MAGEC2Q9UBF1 373 aaPredicted RBP17.11■□□□□ 0.33
SCAP-207ENST00000441517 NRXN3Q9Y4C0 1643 aa17.11■□□□□ 0.33
SCAP-207ENST00000441517 GSG1L2A8MUP6 293 aa17.11■□□□□ 0.33
SCAP-207ENST00000441517 KLRK1P26718 216 aa17.11■□□□□ 0.33
SCAP-207ENST00000441517 EVCP57679 992 aa17.11■□□□□ 0.33
SCAP-207ENST00000441517 PTGDRQ13258 359 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms