RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 NEFMP07197 916 aa7.86□□□□□ -1.15
PFDN4-202ENST00000441080 MAP4P27816 1152 aaKnown RBP7.86□□□□□ -1.15
PFDN4-202ENST00000441080 MCM4P33991 863 aa7.86□□□□□ -1.15
PFDN4-202ENST00000441080 ETF1P62495 437 aaKnown RBP7.86□□□□□ -1.15
PFDN4-202ENST00000441080 PDE4BQ07343 736 aa7.86□□□□□ -1.15
PFDN4-202ENST00000441080 FAM20CQ8IXL6 584 aa7.86□□□□□ -1.15
PFDN4-202ENST00000441080 RASGRP4Q8TDF6 673 aa7.86□□□□□ -1.15
PFDN4-202ENST00000441080 FBLIM1Q8WUP2 373 aa7.86□□□□□ -1.15
PFDN4-202ENST00000441080 ISL2Q96A47 359 aa7.86□□□□□ -1.15
PFDN4-202ENST00000441080 WNT10AQ9GZT5 417 aa7.86□□□□□ -1.15
PFDN4-202ENST00000441080 KCNF1Q9H3M0 494 aa7.86□□□□□ -1.15
PFDN4-202ENST00000441080 SSU72Q9NP77 194 aaKnown RBP7.86□□□□□ -1.15
PFDN4-202ENST00000441080 POLR3KQ9Y2Y1 108 aaPredicted RBP7.86□□□□□ -1.15
PFDN4-202ENST00000441080 GRK4P32298 578 aa7.85□□□□□ -1.15
PFDN4-202ENST00000441080 NTF4P34130 210 aa7.85□□□□□ -1.15
PFDN4-202ENST00000441080 SMYD4Q8IYR2 804 aaPredicted RBP7.85□□□□□ -1.15
PFDN4-202ENST00000441080 ACSS3Q9H6R3 686 aa7.85□□□□□ -1.15
PFDN4-202ENST00000441080 TPSG1Q9NRR2 321 aa7.85□□□□□ -1.15
PFDN4-202ENST00000441080 DAGLAQ9Y4D2 1042 aa7.85□□□□□ -1.15
PFDN4-202ENST00000441080 CORINQ9Y5Q5 1042 aa7.85□□□□□ -1.15
PFDN4-202ENST00000441080 PGRP06401 933 aa7.84□□□□□ -1.15
PFDN4-202ENST00000441080 PLCG1P19174 1290 aa7.84□□□□□ -1.15
PFDN4-202ENST00000441080 ZNF165P49910 485 aa7.84□□□□□ -1.15
PFDN4-202ENST00000441080 COL9A2Q14055 689 aaPredicted RBP7.84□□□□□ -1.15
PFDN4-202ENST00000441080 GK5Q6ZS86 529 aa7.84□□□□□ -1.15
PFDN4-202ENST00000441080 CDC37L1Q7L3B6 337 aa7.84□□□□□ -1.15
PFDN4-202ENST00000441080 VPS37DQ86XT2 251 aa7.84□□□□□ -1.15
PFDN4-202ENST00000441080 ZNF507Q8TCN5 953 aa7.84□□□□□ -1.15
PFDN4-202ENST00000441080 SPOCK3Q9BQ16 436 aa7.84□□□□□ -1.15
PFDN4-202ENST00000441080 SEMA6CQ9H3T2 930 aa7.84□□□□□ -1.15
PFDN4-202ENST00000441080 GINM1Q9NU53 330 aa7.84□□□□□ -1.15
PFDN4-202ENST00000441080 EFR3BQ9Y2G0 817 aa7.84□□□□□ -1.15
PFDN4-202ENST00000441080 PCDHB14Q9Y5E9 798 aa7.84□□□□□ -1.15
PFDN4-202ENST00000441080 FAM95CA0A1B0GW59 222 aa7.83□□□□□ -1.16
PFDN4-202ENST00000441080 MSTNO14793 375 aa7.83□□□□□ -1.16
PFDN4-202ENST00000441080 PROCP04070 461 aa7.83□□□□□ -1.16
PFDN4-202ENST00000441080 NFICP08651 508 aa7.83□□□□□ -1.16
PFDN4-202ENST00000441080 MAP7Q14244 749 aa7.83□□□□□ -1.16
PFDN4-202ENST00000441080 GPAT2Q6NUI2 795 aa7.83□□□□□ -1.16
PFDN4-202ENST00000441080 BEND4Q6ZU67 534 aa7.83□□□□□ -1.16
PFDN4-202ENST00000441080 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.83□□□□□ -1.16
PFDN4-202ENST00000441080 REXO1Q8N1G1 1221 aaKnown RBP7.83□□□□□ -1.16
PFDN4-202ENST00000441080 KCT2Q8NC54 265 aa7.83□□□□□ -1.16
PFDN4-202ENST00000441080 EZH1Q92800 747 aaPredicted RBP7.83□□□□□ -1.16
PFDN4-202ENST00000441080 PCOLCE2Q9UKZ9 415 aa7.83□□□□□ -1.16
PFDN4-202ENST00000441080 PRR36Q9H6K5 1346 aa7.82□□□□□ -1.16
PFDN4-202ENST00000441080 HTR3BO95264 441 aa7.82□□□□□ -1.16
PFDN4-202ENST00000441080 NASPP49321 788 aaPredicted RBP7.82□□□□□ -1.16
PFDN4-202ENST00000441080 ARID5AQ03989 594 aa7.82□□□□□ -1.16
PFDN4-202ENST00000441080 CLCQ05315 142 aa7.82□□□□□ -1.16
PFDN4-202ENST00000441080 DOC2BQ14184 412 aa7.82□□□□□ -1.16
PFDN4-202ENST00000441080 PAOXQ6QHF9 649 aa7.82□□□□□ -1.16
PFDN4-202ENST00000441080 UBE3DQ7Z6J8 389 aa7.82□□□□□ -1.16
PFDN4-202ENST00000441080 HID1Q8IV36 788 aa7.82□□□□□ -1.16
PFDN4-202ENST00000441080 SLC43A3Q8NBI5 491 aa7.82□□□□□ -1.16
PFDN4-202ENST00000441080 SEC16BQ96JE7 1060 aa7.82□□□□□ -1.16
PFDN4-202ENST00000441080 FERD3LQ96RJ6 166 aa7.82□□□□□ -1.16
PFDN4-202ENST00000441080 FBRSQ9HAH7 460 aa7.82□□□□□ -1.16
PFDN4-202ENST00000441080 LGR6Q9HBX8 967 aa7.82□□□□□ -1.16
PFDN4-202ENST00000441080 REV1Q9UBZ9 1251 aa7.82□□□□□ -1.16
PFDN4-202ENST00000441080 ADAM30Q9UKF2 790 aa7.82□□□□□ -1.16
PFDN4-202ENST00000441080 RAXQ9Y2V3 346 aa7.82□□□□□ -1.16
PFDN4-202ENST00000441080 ATE1O95260 518 aa7.81□□□□□ -1.16
PFDN4-202ENST00000441080 ATF4P18848 351 aaPredicted RBP7.81□□□□□ -1.16
PFDN4-202ENST00000441080 DNAJA1P31689 397 aaKnown RBP7.81□□□□□ -1.16
PFDN4-202ENST00000441080 SOX9P48436 509 aa7.81□□□□□ -1.16
PFDN4-202ENST00000441080 MLECQ14165 292 aa7.81□□□□□ -1.16
PFDN4-202ENST00000441080 NFKBIBQ15653 356 aa7.81□□□□□ -1.16
PFDN4-202ENST00000441080 PRR23CQ6ZRP0 262 aa7.81□□□□□ -1.16
PFDN4-202ENST00000441080 CLEC10AQ8IUN9 316 aa7.81□□□□□ -1.16
PFDN4-202ENST00000441080 EHMT1Q9H9B1 1298 aa7.81□□□□□ -1.16
PFDN4-202ENST00000441080 STOML1Q9UBI4 398 aa7.81□□□□□ -1.16
PFDN4-202ENST00000441080 TMEM201Q5SNT2 666 aa7.8□□□□□ -1.16
PFDN4-202ENST00000441080 ACSF2Q96CM8 615 aaPredicted RBP7.8□□□□□ -1.16
PFDN4-202ENST00000441080 FAM83CQ9BQN1 747 aa7.8□□□□□ -1.16
PFDN4-202ENST00000441080 C7orf69Q9H7B7 122 aa7.8□□□□□ -1.16
PFDN4-202ENST00000441080 PPT2Q9UMR5 302 aa7.8□□□□□ -1.16
PFDN4-202ENST00000441080 DYNC1LI2O43237 492 aaPredicted RBP7.79□□□□□ -1.16
PFDN4-202ENST00000441080 IGHA1P01876 353 aa7.79□□□□□ -1.16
PFDN4-202ENST00000441080 NKG7Q16617 165 aa7.79□□□□□ -1.16
PFDN4-202ENST00000441080 FBXW10Q5XX13 1052 aa7.79□□□□□ -1.16
PFDN4-202ENST00000441080 TMEM87BQ96K49 555 aa7.79□□□□□ -1.16
PFDN4-202ENST00000441080 TJP2Q9UDY2 1190 aa7.79□□□□□ -1.16
PFDN4-202ENST00000441080 KLHL3Q9UH77 587 aa7.79□□□□□ -1.16
PFDN4-202ENST00000441080 ZNRF3Q9ULT6 936 aa7.79□□□□□ -1.16
PFDN4-202ENST00000441080 HMX2A2RU54 273 aa7.78□□□□□ -1.16
PFDN4-202ENST00000441080 IMPDH2P12268 514 aa7.78□□□□□ -1.16
PFDN4-202ENST00000441080 SLC6A19Q695T7 634 aa7.78□□□□□ -1.16
PFDN4-202ENST00000441080 CCDC81Q6ZN84 652 aa7.78□□□□□ -1.16
PFDN4-202ENST00000441080 MCATQ8IVS2 390 aaKnown RBP7.78□□□□□ -1.16
PFDN4-202ENST00000441080 MRPL41Q8IXM3 137 aaKnown RBP7.78□□□□□ -1.16
PFDN4-202ENST00000441080 FAM13CQ8NE31 585 aa7.78□□□□□ -1.16
PFDN4-202ENST00000441080 CPLX3Q8WVH0 158 aa7.78□□□□□ -1.16
PFDN4-202ENST00000441080 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.78□□□□□ -1.165e-9■■■□□ 16.2
PFDN4-202ENST00000441080 SRRTQ9BXP5 876 aaKnown RBP7.78□□□□□ -1.16
PFDN4-202ENST00000441080 STRIP2Q9ULQ0 834 aa7.78□□□□□ -1.16
PFDN4-202ENST00000441080 LRIG2O94898 1065 aa7.77□□□□□ -1.17
PFDN4-202ENST00000441080 SSBP05455 408 aaKnown RBP eCLIP7.77□□□□□ -1.17
PFDN4-202ENST00000441080 FGRP09769 529 aa7.77□□□□□ -1.17
PFDN4-202ENST00000441080 H2AFB1P0C5Y9 115 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms