RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 ROBO3Q96MS0 1386 aa22.44■■□□□ 1.18
SNX17-203ENST00000440760 PPFIA3O75145 1194 aa22.44■■□□□ 1.18
SNX17-203ENST00000440760 WDHD1O75717 1129 aaPredicted RBP22.44■■□□□ 1.18
SNX17-203ENST00000440760 POLR3DP05423 398 aaPredicted RBP22.44■■□□□ 1.18
SNX17-203ENST00000440760 FGRP09769 529 aa22.44■■□□□ 1.18
SNX17-203ENST00000440760 RXRAP19793 462 aa22.44■■□□□ 1.18
SNX17-203ENST00000440760 EVCP57679 992 aa22.44■■□□□ 1.18
SNX17-203ENST00000440760 SLC44A5Q8NCS7 719 aa22.44■■□□□ 1.18
SNX17-203ENST00000440760 HPS5Q9UPZ3 1129 aa22.44■■□□□ 1.18
SNX17-203ENST00000440760 ZBTB12Q9Y330 459 aaPredicted RBP22.44■■□□□ 1.18
SNX17-203ENST00000440760 RSBN1LQ6PCB5 846 aaPredicted RBP22.43■■□□□ 1.18
SNX17-203ENST00000440760 ZDHHC15Q96MV8 337 aa22.43■■□□□ 1.18
SNX17-203ENST00000440760 MYL10Q9BUA6 226 aa22.43■■□□□ 1.18
SNX17-203ENST00000440760 CACNB3P54284 484 aa22.43■■□□□ 1.18
SNX17-203ENST00000440760 FAM47AQ5JRC9 791 aa22.43■■□□□ 1.18
SNX17-203ENST00000440760 NFXL1Q6ZNB6 911 aa22.43■■□□□ 1.18
SNX17-203ENST00000440760 AMOTL1Q8IY63 956 aa22.43■■□□□ 1.18
SNX17-203ENST00000440760 ZNRF3Q9ULT6 936 aa22.43■■□□□ 1.18
SNX17-203ENST00000440760 CTDNEP1O95476 244 aa22.42■■□□□ 1.18
SNX17-203ENST00000440760 SLC3A2P08195 630 aaKnown RBP22.42■■□□□ 1.18
SNX17-203ENST00000440760 NFIAQ12857 509 aa22.42■■□□□ 1.18
SNX17-203ENST00000440760 VPS33BQ9H267 617 aa22.42■■□□□ 1.18
SNX17-203ENST00000440760 TNKSO95271 1327 aa22.42■■□□□ 1.18
SNX17-203ENST00000440760 ORC4O43929 436 aa22.41■■□□□ 1.18
SNX17-203ENST00000440760 APOA5Q6Q788 366 aa22.41■■□□□ 1.18
SNX17-203ENST00000440760 MICU3Q86XE3 530 aa22.41■■□□□ 1.18
SNX17-203ENST00000440760 DDX11Q96FC9 970 aa22.41■■□□□ 1.18
SNX17-203ENST00000440760 UBAC1Q9BSL1 405 aa22.41■■□□□ 1.18
SNX17-203ENST00000440760 PCP11498 1178 aaKnown RBP22.41■■□□□ 1.18
SNX17-203ENST00000440760 SYT1P21579 422 aa22.41■■□□□ 1.18
SNX17-203ENST00000440760 PRELPP51888 382 aa22.41■■□□□ 1.18
SNX17-203ENST00000440760 PDE4BQ07343 736 aa22.41■■□□□ 1.18
SNX17-203ENST00000440760 WTAPQ15007 396 aa22.41■■□□□ 1.18
SNX17-203ENST00000440760 CCDC144CPQ8IYA2 1237 aa22.41■■□□□ 1.18
SNX17-203ENST00000440760 NSUN7Q8NE18 718 aaKnown RBP22.41■■□□□ 1.18
SNX17-203ENST00000440760 FHDC1Q9C0D6 1143 aaPredicted RBP22.41■■□□□ 1.18
SNX17-203ENST00000440760 SERPINA10Q9UK55 444 aa22.41■■□□□ 1.18
SNX17-203ENST00000440760 NMT2O60551 498 aa22.4■■□□□ 1.18
SNX17-203ENST00000440760 BRD1O95696 1058 aa22.4■■□□□ 1.18
SNX17-203ENST00000440760 VIL1P09327 827 aaKnown RBP22.4■■□□□ 1.18
SNX17-203ENST00000440760 SART3Q15020 963 aaKnown RBP22.4■■□□□ 1.18
SNX17-203ENST00000440760 CHAMP1Q96JM3 812 aa22.4■■□□□ 1.18
SNX17-203ENST00000440760 PTPDC1A2A3K4 754 aa22.39■■□□□ 1.18
SNX17-203ENST00000440760 HDLBPQ00341 1268 aaKnown RBP22.39■■□□□ 1.18
SNX17-203ENST00000440760 CFAP100Q494V2 611 aa22.39■■□□□ 1.18
SNX17-203ENST00000440760 SGMS1Q86VZ5 419 aa22.39■■□□□ 1.18
SNX17-203ENST00000440760 ERICH2A1L162 156 aa22.39■■□□□ 1.17
SNX17-203ENST00000440760 LIFRP42702 1097 aa22.39■■□□□ 1.17
SNX17-203ENST00000440760 CXCL9Q07325 125 aa22.39■■□□□ 1.17
SNX17-203ENST00000440760 ENAHQ8N8S7 591 aaPredicted RBP22.39■■□□□ 1.17
SNX17-203ENST00000440760 MYO3BQ8WXR4 1341 aa22.39■■□□□ 1.17
SNX17-203ENST00000440760 ZSCAN10Q96SZ4 725 aaPredicted RBP22.39■■□□□ 1.17
SNX17-203ENST00000440760 GMLQ99445 158 aa22.39■■□□□ 1.17
SNX17-203ENST00000440760 CCDC69A6NI79 296 aa22.38■■□□□ 1.17
SNX17-203ENST00000440760 SEC23AQ15436 765 aa22.38■■□□□ 1.17
SNX17-203ENST00000440760 JDP2Q8WYK2 163 aa22.38■■□□□ 1.17
SNX17-203ENST00000440760 MRIQ9BWK5 157 aa22.38■■□□□ 1.17
SNX17-203ENST00000440760 MYH8P13535 1937 aa22.38■■□□□ 1.17
SNX17-203ENST00000440760 TSPY2A6NKD2 308 aa22.38■■□□□ 1.17
SNX17-203ENST00000440760 STX6O43752 255 aa22.38■■□□□ 1.17
SNX17-203ENST00000440760 METAP2P50579 478 aaKnown RBP eCLIP22.38■■□□□ 1.17
SNX17-203ENST00000440760 ZFPM1Q8IX07 1006 aa22.38■■□□□ 1.17
SNX17-203ENST00000440760 SMARCC2Q8TAQ2 1214 aa22.38■■□□□ 1.17
SNX17-203ENST00000440760 OSBPL5Q9H0X9 879 aaPredicted RBP22.38■■□□□ 1.17
SNX17-203ENST00000440760 SIPA1L1O43166 1804 aa22.37■■□□□ 1.17
SNX17-203ENST00000440760 ZBTB43O43298 467 aa22.37■■□□□ 1.17
SNX17-203ENST00000440760 TDRD3Q9H7E2 651 aaKnown RBP22.37■■□□□ 1.17
SNX17-203ENST00000440760 MKNK2Q9HBH9 465 aa22.37■■□□□ 1.17
SNX17-203ENST00000440760 SLC12A7Q9Y666 1083 aa22.37■■□□□ 1.17
SNX17-203ENST00000440760 LTBP3Q9NS15 1303 aa22.36■■□□□ 1.17
SNX17-203ENST00000440760 VPS37CA5D8V6 355 aaPredicted RBP22.36■■□□□ 1.17
SNX17-203ENST00000440760 FOSBP53539 338 aa22.36■■□□□ 1.17
SNX17-203ENST00000440760 TCP10Q12799 353 aa22.36■■□□□ 1.17
SNX17-203ENST00000440760 C16orf86Q6ZW13 317 aa22.36■■□□□ 1.17
SNX17-203ENST00000440760 IQCA1Q86XH1 822 aa22.36■■□□□ 1.17
SNX17-203ENST00000440760 PRMT6Q96LA8 375 aaPredicted RBP22.36■■□□□ 1.17
SNX17-203ENST00000440760 LLPHQ9BRT6 129 aaKnown RBP22.36■■□□□ 1.17
SNX17-203ENST00000440760 WDR33Q9C0J8 1336 aaKnown RBP22.36■■□□□ 1.17
SNX17-203ENST00000440760 GOLGA8AA7E2F4 631 aa22.36■■□□□ 1.17
SNX17-203ENST00000440760 CDC27P30260 824 aa22.36■■□□□ 1.17
SNX17-203ENST00000440760 MCM4P33991 863 aa22.36■■□□□ 1.17
SNX17-203ENST00000440760 CDK8P49336 464 aa22.36■■□□□ 1.17
SNX17-203ENST00000440760 SLURP2P0DP57 97 aa22.35■■□□□ 1.17
SNX17-203ENST00000440760 RASA1P20936 1047 aa22.35■■□□□ 1.17
SNX17-203ENST00000440760 ADD1P35611 737 aaKnown RBP22.35■■□□□ 1.17
SNX17-203ENST00000440760 TFAP4Q01664 338 aa22.35■■□□□ 1.17
SNX17-203ENST00000440760 FOXD4L6Q3SYB3 417 aaPredicted RBP22.35■■□□□ 1.17
SNX17-203ENST00000440760 LARP1BQ659C4 914 aaKnown RBP22.35■■□□□ 1.17
SNX17-203ENST00000440760 CIAPIN1Q6FI81 312 aa22.35■■□□□ 1.17
SNX17-203ENST00000440760 FOXD4L3Q6VB84 417 aaPredicted RBP22.35■■□□□ 1.17
SNX17-203ENST00000440760 MTA3Q9BTC8 594 aa22.35■■□□□ 1.17
SNX17-203ENST00000440760 FAM198AQ9UFP1 575 aa22.35■■□□□ 1.17
SNX17-203ENST00000440760 MTMR6Q9Y217 621 aa22.35■■□□□ 1.17
SNX17-203ENST00000440760 SHTN1A0MZ66 631 aa22.34■■□□□ 1.17
SNX17-203ENST00000440760 IFIT1BQ5T764 474 aaKnown RBP22.34■■□□□ 1.17
SNX17-203ENST00000440760 ZNF654Q8IZM8 581 aa22.34■■□□□ 1.17
SNX17-203ENST00000440760 BAG4O95429 457 aaKnown RBP22.34■■□□□ 1.17
SNX17-203ENST00000440760 ZSCAN22P10073 491 aaPredicted RBP22.34■■□□□ 1.17
SNX17-203ENST00000440760 CDC37L1Q7L3B6 337 aa22.34■■□□□ 1.17
SNX17-203ENST00000440760 GBP4Q96PP9 640 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms