RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 ECM2O94769 699 aaPredicted RBP19.62■□□□□ 0.73
ITGB1-207ENST00000439974 PSMC4P43686 418 aa19.62■□□□□ 0.73
ITGB1-207ENST00000439974 NOL10Q9BSC4 688 aaKnown RBP19.62■□□□□ 0.73
ITGB1-207ENST00000439974 OSBPL5Q9H0X9 879 aaPredicted RBP19.62■□□□□ 0.73
ITGB1-207ENST00000439974 PHIPQ8WWQ0 1821 aa19.62■□□□□ 0.73
ITGB1-207ENST00000439974 MAST2Q6P0Q8 1798 aa19.62■□□□□ 0.73
ITGB1-207ENST00000439974 SMARCA5O60264 1052 aaPredicted RBP19.61■□□□□ 0.73
ITGB1-207ENST00000439974 CYP2C8P10632 490 aa19.61■□□□□ 0.73
ITGB1-207ENST00000439974 EN2P19622 333 aaPredicted RBP19.61■□□□□ 0.73
ITGB1-207ENST00000439974 HOXD10P28358 340 aa19.61■□□□□ 0.73
ITGB1-207ENST00000439974 CTGFP29279 349 aa19.61■□□□□ 0.73
ITGB1-207ENST00000439974 GADL1Q6ZQY3 521 aa19.61■□□□□ 0.73
ITGB1-207ENST00000439974 AACSQ86V21 672 aa19.61■□□□□ 0.73
ITGB1-207ENST00000439974 TEX11Q8IYF3 940 aa19.61■□□□□ 0.73
ITGB1-207ENST00000439974 ZNF512BQ96KM6 892 aaPredicted RBP19.61■□□□□ 0.73
ITGB1-207ENST00000439974 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.61■□□□□ 0.73
ITGB1-207ENST00000439974 SNRKQ9NRH2 765 aa19.61■□□□□ 0.73
ITGB1-207ENST00000439974 DBNLQ9UJU6 430 aaKnown RBP19.61■□□□□ 0.73
ITGB1-207ENST00000439974 SLC45A1Q9Y2W3 748 aa19.61■□□□□ 0.73
ITGB1-207ENST00000439974 FMNL1O95466 1100 aaPredicted RBP19.6■□□□□ 0.73
ITGB1-207ENST00000439974 BAG3O95817 575 aa19.6■□□□□ 0.73
ITGB1-207ENST00000439974 BCRP11274 1271 aa19.6■□□□□ 0.73
ITGB1-207ENST00000439974 SLC4A8Q2Y0W8 1093 aa19.6■□□□□ 0.73
ITGB1-207ENST00000439974 NAA16Q6N069 864 aaPredicted RBP19.6■□□□□ 0.73
ITGB1-207ENST00000439974 ERC1Q8IUD2 1116 aa19.6■□□□□ 0.73
ITGB1-207ENST00000439974 SH3TC2Q8TF17 1288 aa19.6■□□□□ 0.73
ITGB1-207ENST00000439974 TRIM47Q96LD4 638 aa19.6■□□□□ 0.73
ITGB1-207ENST00000439974 SRRDQ9UH36 339 aa19.6■□□□□ 0.73
ITGB1-207ENST00000439974 TRIM75PA6NK02 468 aa19.59■□□□□ 0.73
ITGB1-207ENST00000439974 FAM196BA6NMK8 535 aa19.59■□□□□ 0.73
ITGB1-207ENST00000439974 IGSF3O75054 1194 aa19.59■□□□□ 0.73
ITGB1-207ENST00000439974 OSBPP22059 807 aa19.59■□□□□ 0.73
ITGB1-207ENST00000439974 HSP90AB4PQ58FF6 505 aa19.59■□□□□ 0.73
ITGB1-207ENST00000439974 SH3RF3Q8TEJ3 882 aaPredicted RBP19.59■□□□□ 0.73
ITGB1-207ENST00000439974 AATFQ9NY61 560 aaKnown RBP eCLIP19.59■□□□□ 0.73
ITGB1-207ENST00000439974 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.59■□□□□ 0.73
ITGB1-207ENST00000439974 CYP2E1P05181 493 aaPredicted RBP19.58■□□□□ 0.72
ITGB1-207ENST00000439974 PLCG2P16885 1265 aa19.58■□□□□ 0.72
ITGB1-207ENST00000439974 FCGRTP55899 365 aa19.58■□□□□ 0.72
ITGB1-207ENST00000439974 CCDC84Q86UT8 332 aaPredicted RBP19.58■□□□□ 0.72
ITGB1-207ENST00000439974 NDUFB9Q9Y6M9 179 aa19.58■□□□□ 0.72
ITGB1-207ENST00000439974 MYPNQ86TC9 1320 aa19.57■□□□□ 0.72
ITGB1-207ENST00000439974 MYCP01106 439 aaPredicted RBP19.57■□□□□ 0.72
ITGB1-207ENST00000439974 ZAP70P43403 619 aa19.57■□□□□ 0.72
ITGB1-207ENST00000439974 PPP4CP60510 307 aa19.57■□□□□ 0.72
ITGB1-207ENST00000439974 RAET1EQ8TD07 263 aa19.57■□□□□ 0.72
ITGB1-207ENST00000439974 KIF1BPQ96EK5 621 aa19.57■□□□□ 0.72
ITGB1-207ENST00000439974 TBC1D2Q9BYX2 928 aa19.57■□□□□ 0.72
ITGB1-207ENST00000439974 HERC5Q9UII4 1024 aaKnown RBP19.57■□□□□ 0.72
ITGB1-207ENST00000439974 ATAD5Q96QE3 1844 aa19.57■□□□□ 0.72
ITGB1-207ENST00000439974 MGAMO43451 1857 aa19.56■□□□□ 0.72
ITGB1-207ENST00000439974 MYO5AQ9Y4I1 1855 aaKnown RBP19.56■□□□□ 0.72
ITGB1-207ENST00000439974 RAB11FIP3O75154 756 aa19.56■□□□□ 0.72
ITGB1-207ENST00000439974 CAP2P40123 477 aa19.56■□□□□ 0.72
ITGB1-207ENST00000439974 SMCR8Q8TEV9 937 aaPredicted RBP19.56■□□□□ 0.72
ITGB1-207ENST00000439974 DHX36Q9H2U1 1008 aaKnown RBP19.56■□□□□ 0.72
ITGB1-207ENST00000439974 PI4KBQ9UBF8 816 aa19.56■□□□□ 0.72
ITGB1-207ENST00000439974 AGTPBP1Q9UPW5 1226 aa19.56■□□□□ 0.72
ITGB1-207ENST00000439974 ADGRA1Q86SQ6 560 aa19.55■□□□□ 0.72
ITGB1-207ENST00000439974 CLASRPQ8N2M8 674 aaKnown RBP19.55■□□□□ 0.72
ITGB1-207ENST00000439974 ZNF280CQ8ND82 737 aa19.55■□□□□ 0.72
ITGB1-207ENST00000439974 DCTPP1Q9H773 170 aa19.55■□□□□ 0.72
ITGB1-207ENST00000439974 PIH1D3Q9NQM4 214 aaKnown RBP19.55■□□□□ 0.72
ITGB1-207ENST00000439974 CDK5RAP2Q96SN8 1893 aa19.54■□□□□ 0.72
ITGB1-207ENST00000439974 SIPA1L1O43166 1804 aa19.54■□□□□ 0.72
ITGB1-207ENST00000439974 FOCADQ5VW36 1801 aa19.54■□□□□ 0.72
ITGB1-207ENST00000439974 GRK4P32298 578 aa19.54■□□□□ 0.72
ITGB1-207ENST00000439974 PRKCZQ05513 592 aa19.54■□□□□ 0.72
ITGB1-207ENST00000439974 SPP2Q13103 211 aa19.54■□□□□ 0.72
ITGB1-207ENST00000439974 RRP1BQ14684 758 aaKnown RBP19.54■□□□□ 0.72
ITGB1-207ENST00000439974 MAPKAPK5Q8IW41 473 aa19.54■□□□□ 0.72
ITGB1-207ENST00000439974 PROCA1Q8NCQ7 364 aaPredicted RBP19.54■□□□□ 0.72
ITGB1-207ENST00000439974 TGFBRAP1Q8WUH2 860 aa19.54■□□□□ 0.72
ITGB1-207ENST00000439974 PNMA3Q9UL41 463 aa19.54■□□□□ 0.72
ITGB1-207ENST00000439974 FLT1P17948 1338 aa19.53■□□□□ 0.72
ITGB1-207ENST00000439974 LOC285556D6RIA3 1793 aa19.53■□□□□ 0.72
ITGB1-207ENST00000439974 USP17L5A8MUK1 530 aa19.53■□□□□ 0.72
ITGB1-207ENST00000439974 IFIT2P09913 472 aaKnown RBP19.53■□□□□ 0.72
ITGB1-207ENST00000439974 TREML2Q5T2D2 321 aa19.53■□□□□ 0.72
ITGB1-207ENST00000439974 LRRCC1Q9C099 1032 aa19.53■□□□□ 0.72
ITGB1-207ENST00000439974 AS3MTQ9HBK9 375 aa19.53■□□□□ 0.72
ITGB1-207ENST00000439974 CYP7A1P22680 504 aa19.52■□□□□ 0.72
ITGB1-207ENST00000439974 MTFR1Q15390 333 aa19.52■□□□□ 0.72
ITGB1-207ENST00000439974 GCC1Q96CN9 775 aa19.52■□□□□ 0.72
ITGB1-207ENST00000439974 IDH1O75874 414 aaKnown RBP19.51■□□□□ 0.71
ITGB1-207ENST00000439974 UBXN2AP68543 259 aa19.51■□□□□ 0.71
ITGB1-207ENST00000439974 PABPC4Q13310 644 aaKnown RBP eCLIP19.51■□□□□ 0.71
ITGB1-207ENST00000439974 FOXP4Q8IVH2 680 aaPredicted RBP19.51■□□□□ 0.71
ITGB1-207ENST00000439974 SLAIN1Q8ND83 568 aa19.51■□□□□ 0.71
ITGB1-207ENST00000439974 TRIM34Q9BYJ4 488 aa19.51■□□□□ 0.71
ITGB1-207ENST00000439974 GABRQQ9UN88 632 aa19.51■□□□□ 0.71
ITGB1-207ENST00000439974 TNPO2O14787 897 aaKnown RBP19.5■□□□□ 0.71
ITGB1-207ENST00000439974 HLA-DOAP06340 250 aa19.5■□□□□ 0.71
ITGB1-207ENST00000439974 ASNSP08243 561 aa19.5■□□□□ 0.71
ITGB1-207ENST00000439974 HMGCS2P54868 508 aa19.5■□□□□ 0.71
ITGB1-207ENST00000439974 FAM110CQ1W6H9 321 aa19.5■□□□□ 0.71
ITGB1-207ENST00000439974 SH3D19Q5HYK7 790 aa19.5■□□□□ 0.71
ITGB1-207ENST00000439974 METTL16Q86W50 562 aaKnown RBP19.5■□□□□ 0.71
ITGB1-207ENST00000439974 CERS3Q8IU89 383 aa19.5■□□□□ 0.71
ITGB1-207ENST00000439974 ANKRD13CQ8N6S4 541 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms