RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 INTS13Q9NVM9 706 aa13.25□□□□□ -0.29
SMPD4-209ENST00000439886 IRAK4Q9NWZ3 460 aa13.25□□□□□ -0.29
SMPD4-209ENST00000439886 KDRP35968 1356 aa13.25□□□□□ -0.29
SMPD4-209ENST00000439886 DIP2BQ9P265 1576 aa13.25□□□□□ -0.29
SMPD4-209ENST00000439886 MYO5BQ9ULV0 1848 aa13.25□□□□□ -0.29
SMPD4-209ENST00000439886 GOLGA8AA7E2F4 631 aa13.24□□□□□ -0.29
SMPD4-209ENST00000439886 EBAG9O00559 213 aa13.24□□□□□ -0.29
SMPD4-209ENST00000439886 RNF113AO15541 343 aaKnown RBP13.24□□□□□ -0.29
SMPD4-209ENST00000439886 IDH1O75874 414 aaKnown RBP13.24□□□□□ -0.29
SMPD4-209ENST00000439886 ABL1P00519 1130 aa13.24□□□□□ -0.29
SMPD4-209ENST00000439886 HDAC6Q9UBN7 1215 aa13.24□□□□□ -0.29
SMPD4-209ENST00000439886 MAN1B1Q9UKM7 699 aa13.24□□□□□ -0.29
SMPD4-209ENST00000439886 DENND2AQ9ULE3 1009 aa13.24□□□□□ -0.29
SMPD4-209ENST00000439886 TFR2Q9UP52 801 aa13.24□□□□□ -0.29
SMPD4-209ENST00000439886 KCNJ6P48051 423 aa13.24□□□□□ -0.29
SMPD4-209ENST00000439886 PTPN12Q05209 780 aaKnown RBP13.24□□□□□ -0.29
SMPD4-209ENST00000439886 RNF187Q5TA31 235 aaPredicted RBP13.24□□□□□ -0.29
SMPD4-209ENST00000439886 MCTP2Q6DN12 878 aa13.24□□□□□ -0.29
SMPD4-209ENST00000439886 KIAA1328Q86T90 577 aa13.24□□□□□ -0.29
SMPD4-209ENST00000439886 PSMB7Q99436 277 aa13.24□□□□□ -0.29
SMPD4-209ENST00000439886 ZKSCAN3Q9BRR0 538 aa13.24□□□□□ -0.29
SMPD4-209ENST00000439886 KCND1Q9NSA2 647 aa13.24□□□□□ -0.29
SMPD4-209ENST00000439886 MAST3O60307 1309 aa13.24□□□□□ -0.29
SMPD4-209ENST00000439886 LRRIQ3A6PVS8 624 aaPredicted RBP13.24□□□□□ -0.29
SMPD4-209ENST00000439886 RBM5P52756 815 aaKnown RBP eCLIP13.24□□□□□ -0.29
SMPD4-209ENST00000439886 EXOSC10Q01780 885 aaKnown RBP13.24□□□□□ -0.29
SMPD4-209ENST00000439886 FCHSD1Q86WN1 690 aa13.24□□□□□ -0.29
SMPD4-209ENST00000439886 JADE2Q9NQC1 790 aa13.24□□□□□ -0.29
SMPD4-209ENST00000439886 DDX21Q9NR30 783 aaKnown RBP eCLIP13.24□□□□□ -0.29
SMPD4-209ENST00000439886 MKRN1Q9UHC7 482 aaKnown RBP13.24□□□□□ -0.29
SMPD4-209ENST00000439886 USP6P35125 1406 aa13.24□□□□□ -0.29
SMPD4-209ENST00000439886 B4E1Z4 1266 aa13.23□□□□□ -0.29
SMPD4-209ENST00000439886 RNMTO43148 476 aaKnown RBP13.23□□□□□ -0.29
SMPD4-209ENST00000439886 FGAP02671 866 aa13.23□□□□□ -0.29
SMPD4-209ENST00000439886 GRIN1Q05586 938 aa13.23□□□□□ -0.29
SMPD4-209ENST00000439886 SLC9C2Q5TAH2 1124 aa13.23□□□□□ -0.29
SMPD4-209ENST00000439886 FBXW10Q5XX13 1052 aa13.23□□□□□ -0.29
SMPD4-209ENST00000439886 KRI1Q8N9T8 703 aaKnown RBP13.23□□□□□ -0.29
SMPD4-209ENST00000439886 FAM71BQ8TC56 605 aa13.23□□□□□ -0.29
SMPD4-209ENST00000439886 OSBP2Q969R2 916 aa13.23□□□□□ -0.29
SMPD4-209ENST00000439886 KIFC2Q96AC6 838 aa13.23□□□□□ -0.29
SMPD4-209ENST00000439886 HSD3B7Q9H2F3 369 aa13.23□□□□□ -0.29
SMPD4-209ENST00000439886 ADGRG1Q9Y653 693 aa13.23□□□□□ -0.29
SMPD4-209ENST00000439886 SIGLEC1Q9BZZ2 1709 aa13.23□□□□□ -0.29
SMPD4-209ENST00000439886 BTBD18B2RXH4 712 aa13.23□□□□□ -0.29
SMPD4-209ENST00000439886 CSB-PGBD3P0DP91 1061 aa13.23□□□□□ -0.29
SMPD4-209ENST00000439886 STIM1Q13586 685 aa13.23□□□□□ -0.29
SMPD4-209ENST00000439886 PI16Q6UXB8 463 aa13.23□□□□□ -0.29
SMPD4-209ENST00000439886 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.23□□□□□ -0.29
SMPD4-209ENST00000439886 ADGRL3Q9HAR2 1447 aa13.23□□□□□ -0.29
SMPD4-209ENST00000439886 INCENPQ9NQS7 918 aa13.23□□□□□ -0.29
SMPD4-209ENST00000439886 TRIM10Q9UDY6 481 aa13.23□□□□□ -0.29
SMPD4-209ENST00000439886 FRMPD1Q5SYB0 1578 aa13.23□□□□□ -0.29
SMPD4-209ENST00000439886 SHTN1A0MZ66 631 aa13.23□□□□□ -0.29
SMPD4-209ENST00000439886 PIP4K2BP78356 416 aa13.23□□□□□ -0.29
SMPD4-209ENST00000439886 NBPF10Q6P3W6 841 aaKnown RBP13.23□□□□□ -0.29
SMPD4-209ENST00000439886 GIMAP7Q8NHV1 300 aa13.23□□□□□ -0.29
SMPD4-209ENST00000439886 BCAS4Q8TDM0 211 aa13.23□□□□□ -0.29
SMPD4-209ENST00000439886 CEP126Q9P2H0 1117 aa13.23□□□□□ -0.29
SMPD4-209ENST00000439886 ARAP3Q8WWN8 1544 aa13.22□□□□□ -0.29
SMPD4-209ENST00000439886 hCG_1642624A0A1W2PR95 340 aa13.22□□□□□ -0.29
SMPD4-209ENST00000439886 KIAA0754O94854 1291 aa13.22□□□□□ -0.29
SMPD4-209ENST00000439886 IPO7O95373 1038 aaKnown RBP13.22□□□□□ -0.29
SMPD4-209ENST00000439886 SCP2P22307 547 aa13.22□□□□□ -0.29
SMPD4-209ENST00000439886 LRRC24Q50LG9 513 aa13.22□□□□□ -0.29
SMPD4-209ENST00000439886 OTUD6BQ8N6M0 293 aa13.22□□□□□ -0.29
SMPD4-209ENST00000439886 EHD4Q9H223 541 aa13.22□□□□□ -0.29
SMPD4-209ENST00000439886 NLRP2Q9NX02 1062 aa13.22□□□□□ -0.29
SMPD4-209ENST00000439886 TAB2Q9NYJ8 693 aa13.22□□□□□ -0.29
SMPD4-209ENST00000439886 L1RE1Q9UN81 338 aa13.22□□□□□ -0.29
SMPD4-209ENST00000439886 AKAP4Q5JQC9 854 aa13.22□□□□□ -0.29
SMPD4-209ENST00000439886 FAM76AQ8TAV0 307 aa13.22□□□□□ -0.29
SMPD4-209ENST00000439886 HELLSQ9NRZ9 838 aa13.22□□□□□ -0.29
SMPD4-209ENST00000439886 MYO6Q9UM54 1294 aa13.22□□□□□ -0.29
SMPD4-209ENST00000439886 EID1Q9Y6B2 187 aa13.22□□□□□ -0.29
SMPD4-209ENST00000439886 HECW2Q9P2P5 1572 aa13.22□□□□□ -0.29
SMPD4-209ENST00000439886 MLH3Q9UHC1 1453 aa13.22□□□□□ -0.29
SMPD4-209ENST00000439886 CAND2O75155 1236 aa13.21□□□□□ -0.29
SMPD4-209ENST00000439886 NAP1L1P55209 391 aaKnown RBP13.21□□□□□ -0.29
SMPD4-209ENST00000439886 DSCC1Q9BVC3 393 aa13.21□□□□□ -0.29
SMPD4-209ENST00000439886 ZBTB3Q9H5J0 574 aa13.21□□□□□ -0.29
SMPD4-209ENST00000439886 GOLGA6CA6NDK9 693 aa13.21□□□□□ -0.29
SMPD4-209ENST00000439886 ZBTB43O43298 467 aa13.21□□□□□ -0.29
SMPD4-209ENST00000439886 ATP2C2O75185 946 aa13.21□□□□□ -0.29
SMPD4-209ENST00000439886 GOLGA6DP0CG33 693 aa13.21□□□□□ -0.29
SMPD4-209ENST00000439886 KRT9P35527 623 aa13.21□□□□□ -0.29
SMPD4-209ENST00000439886 CEBPAP49715 358 aaPredicted RBP13.21□□□□□ -0.29
SMPD4-209ENST00000439886 TMEM67Q5HYA8 995 aa13.21□□□□□ -0.29
SMPD4-209ENST00000439886 NAIF1Q69YI7 327 aaPredicted RBP13.21□□□□□ -0.29
SMPD4-209ENST00000439886 TADA2BQ86TJ2 420 aa13.21□□□□□ -0.29
SMPD4-209ENST00000439886 TMEM139Q8IV31 216 aa13.21□□□□□ -0.29
SMPD4-209ENST00000439886 NOC3LQ8WTT2 800 aaKnown RBP13.21□□□□□ -0.29
SMPD4-209ENST00000439886 PAIP2Q9BPZ3 127 aaKnown RBP13.21□□□□□ -0.29
SMPD4-209ENST00000439886 GOLGA6AQ9NYA3 693 aa13.21□□□□□ -0.29
SMPD4-209ENST00000439886 IFIT3O14879 490 aaKnown RBP13.21□□□□□ -0.3
SMPD4-209ENST00000439886 CDKL5O76039 1030 aa13.21□□□□□ -0.3
SMPD4-209ENST00000439886 BMP6P22004 513 aa13.21□□□□□ -0.3
SMPD4-209ENST00000439886 ATP1A2P50993 1020 aa13.21□□□□□ -0.3
SMPD4-209ENST00000439886 MAP9Q49MG5 647 aa13.21□□□□□ -0.3
SMPD4-209ENST00000439886 CCDC70Q6NSX1 233 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms