RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 QSER1Q2KHR3 1735 aa13.71□□□□□ -0.22
SMAD3-202ENST00000439724 DDX60LQ5H9U9 1706 aaKnown RBP13.71□□□□□ -0.22
SMAD3-202ENST00000439724 BAG3O95817 575 aa13.7□□□□□ -0.22
SMAD3-202ENST00000439724 PDE6BP35913 854 aa13.7□□□□□ -0.22
SMAD3-202ENST00000439724 SSRP1Q08945 709 aaKnown RBP13.7□□□□□ -0.22
SMAD3-202ENST00000439724 CCDC144CPQ8IYA2 1237 aa13.7□□□□□ -0.22
SMAD3-202ENST00000439724 TBC1D22AQ8WUA7 517 aa13.7□□□□□ -0.22
SMAD3-202ENST00000439724 WASF1Q92558 559 aa13.7□□□□□ -0.22
SMAD3-202ENST00000439724 PHKBQ93100 1093 aa13.7□□□□□ -0.22
SMAD3-202ENST00000439724 NOL10Q9BSC4 688 aaKnown RBP13.7□□□□□ -0.22
SMAD3-202ENST00000439724 FUCA2Q9BTY2 467 aa13.7□□□□□ -0.22
SMAD3-202ENST00000439724 NUP62CLQ9H1M0 184 aa13.7□□□□□ -0.22
SMAD3-202ENST00000439724 RTEL1Q9NZ71 1219 aa13.7□□□□□ -0.22
SMAD3-202ENST00000439724 PARP3Q9Y6F1 533 aa13.7□□□□□ -0.22
SMAD3-202ENST00000439724 FAM205AQ6ZU69 1335 aa13.7□□□□□ -0.22
SMAD3-202ENST00000439724 MMP10P09238 476 aa13.69□□□□□ -0.22
SMAD3-202ENST00000439724 GRIK5Q16478 980 aa13.69□□□□□ -0.22
SMAD3-202ENST00000439724 TPRNQ4KMQ1 711 aa13.69□□□□□ -0.22
SMAD3-202ENST00000439724 MYSM1Q5VVJ2 828 aa13.69□□□□□ -0.22
SMAD3-202ENST00000439724 KRT40Q6A162 431 aa13.69□□□□□ -0.22
SMAD3-202ENST00000439724 IQCA1Q86XH1 822 aa13.69□□□□□ -0.22
SMAD3-202ENST00000439724 ENAHQ8N8S7 591 aaPredicted RBP13.69□□□□□ -0.22
SMAD3-202ENST00000439724 BICD2Q8TD16 824 aa13.69□□□□□ -0.22
SMAD3-202ENST00000439724 RTFDC1Q9BY42 306 aaPredicted RBP13.69□□□□□ -0.22
SMAD3-202ENST00000439724 POLR3EQ9NVU0 708 aa13.69□□□□□ -0.22
SMAD3-202ENST00000439724 KIF28PB7ZC32 967 aa13.69□□□□□ -0.22
SMAD3-202ENST00000439724 C6orf229H3BNL8 230 aa13.69□□□□□ -0.22
SMAD3-202ENST00000439724 YEATS4O95619 227 aa13.69□□□□□ -0.22
SMAD3-202ENST00000439724 ALDH1B1P30837 517 aa13.69□□□□□ -0.22
SMAD3-202ENST00000439724 PDE4BQ07343 736 aa13.69□□□□□ -0.22
SMAD3-202ENST00000439724 DIXDC1Q155Q3 683 aa13.69□□□□□ -0.22
SMAD3-202ENST00000439724 C12orf60Q5U649 245 aa13.69□□□□□ -0.22
SMAD3-202ENST00000439724 RBM43Q6ZSC3 357 aaKnown RBP13.69□□□□□ -0.22
SMAD3-202ENST00000439724 NBPF11Q86T75 865 aa13.69□□□□□ -0.22
SMAD3-202ENST00000439724 TRIM22Q8IYM9 498 aa13.69□□□□□ -0.22
SMAD3-202ENST00000439724 FANCBQ8NB91 859 aa13.69□□□□□ -0.22
SMAD3-202ENST00000439724 FAM163AQ96GL9 167 aaPredicted RBP13.69□□□□□ -0.22
SMAD3-202ENST00000439724 AIFM3Q96NN9 605 aa13.69□□□□□ -0.22
SMAD3-202ENST00000439724 SLC26A6Q9BXS9 759 aa13.69□□□□□ -0.22
SMAD3-202ENST00000439724 FTOQ9C0B1 505 aaKnown RBP eCLIP13.69□□□□□ -0.22
SMAD3-202ENST00000439724 COA1Q9GZY4 146 aa13.69□□□□□ -0.22
SMAD3-202ENST00000439724 GJB4Q9NTQ9 266 aa13.69□□□□□ -0.22
SMAD3-202ENST00000439724 MYH6P13533 1939 aa13.68□□□□□ -0.22
SMAD3-202ENST00000439724 FOCADQ5VW36 1801 aa13.68□□□□□ -0.22
SMAD3-202ENST00000439724 GPR75-ASB3A0A0A6YYF3 556 aa13.68□□□□□ -0.22
SMAD3-202ENST00000439724 DDAH1O94760 285 aa13.68□□□□□ -0.22
SMAD3-202ENST00000439724 CALM1P0DP23 149 aa13.68□□□□□ -0.22
SMAD3-202ENST00000439724 CALM2P0DP24 149 aa13.68□□□□□ -0.22
SMAD3-202ENST00000439724 CALM3P0DP25 149 aa13.68□□□□□ -0.22
SMAD3-202ENST00000439724 CYP2D6P10635 497 aa13.68□□□□□ -0.22
SMAD3-202ENST00000439724 USP5P45974 858 aa13.68□□□□□ -0.22
SMAD3-202ENST00000439724 CEBPZQ03701 1054 aaKnown RBP13.68□□□□□ -0.22
SMAD3-202ENST00000439724 TRIM29Q14134 588 aa13.68□□□□□ -0.22
SMAD3-202ENST00000439724 UVSSAQ2YD98 709 aa13.68□□□□□ -0.22
SMAD3-202ENST00000439724 IFIT1BQ5T764 474 aaKnown RBP13.68□□□□□ -0.22
SMAD3-202ENST00000439724 SLF2Q8IX21 1173 aa13.68□□□□□ -0.22
SMAD3-202ENST00000439724 CRACR2BQ8N4Y2 399 aaPredicted RBP13.68□□□□□ -0.22
SMAD3-202ENST00000439724 SH3RF3Q8TEJ3 882 aaPredicted RBP13.68□□□□□ -0.22
SMAD3-202ENST00000439724 MASTLQ96GX5 879 aa13.68□□□□□ -0.22
SMAD3-202ENST00000439724 CLSTN2Q9H4D0 955 aa13.68□□□□□ -0.22
SMAD3-202ENST00000439724 MCM9Q9NXL9 1143 aa13.68□□□□□ -0.22
SMAD3-202ENST00000439724 DACT1Q9NYF0 836 aa13.68□□□□□ -0.22
SMAD3-202ENST00000439724 GAKO14976 1311 aa13.68□□□□□ -0.22
SMAD3-202ENST00000439724 PRDM1O75626 825 aa13.67□□□□□ -0.22
SMAD3-202ENST00000439724 DEXIO95424 95 aa13.67□□□□□ -0.22
SMAD3-202ENST00000439724 USP17L8P0C7I0 530 aa13.67□□□□□ -0.22
SMAD3-202ENST00000439724 PLCG2P16885 1265 aa13.67□□□□□ -0.22
SMAD3-202ENST00000439724 MAP3K11Q16584 847 aa13.67□□□□□ -0.22
SMAD3-202ENST00000439724 MFSD14BQ5SR56 506 aa13.67□□□□□ -0.22
SMAD3-202ENST00000439724 CATIPQ7Z7H3 387 aa13.67□□□□□ -0.22
SMAD3-202ENST00000439724 LINC00301Q8NCQ3 95 aa13.67□□□□□ -0.22
SMAD3-202ENST00000439724 NUP133Q8WUM0 1156 aa13.67□□□□□ -0.22
SMAD3-202ENST00000439724 RNF26Q9BY78 433 aaPredicted RBP13.67□□□□□ -0.22
SMAD3-202ENST00000439724 RBM28Q9NW13 759 aaKnown RBP13.67□□□□□ -0.22
SMAD3-202ENST00000439724 SUGT1Q9Y2Z0 365 aa13.67□□□□□ -0.22
SMAD3-202ENST00000439724 A0A1W2PQ27 194 aa13.66□□□□□ -0.22
SMAD3-202ENST00000439724 A0A1W2PQ64 194 aa13.66□□□□□ -0.22
SMAD3-202ENST00000439724 A0A1W2PQD8 194 aa13.66□□□□□ -0.22
SMAD3-202ENST00000439724 NR1I2O75469 434 aa13.66□□□□□ -0.22
SMAD3-202ENST00000439724 POLR3DP05423 398 aaPredicted RBP13.66□□□□□ -0.22
SMAD3-202ENST00000439724 U2AF2P26368 475 aaKnown RBP eCLIP13.66□□□□□ -0.224e-6■■■□□ 18.9
SMAD3-202ENST00000439724 BTDP43251 543 aa13.66□□□□□ -0.22
SMAD3-202ENST00000439724 EVX2Q03828 476 aa13.66□□□□□ -0.22
SMAD3-202ENST00000439724 AMOTL1Q8IY63 956 aa13.66□□□□□ -0.22
SMAD3-202ENST00000439724 MPNDQ8N594 471 aa13.66□□□□□ -0.22
SMAD3-202ENST00000439724 KCNG4Q8TDN1 519 aa13.66□□□□□ -0.22
SMAD3-202ENST00000439724 PDLIM2Q96JY6 352 aa13.66□□□□□ -0.22
SMAD3-202ENST00000439724 TNMDQ9H2S6 317 aa13.66□□□□□ -0.22
SMAD3-202ENST00000439724 CCDC192P0DO97 292 aa13.65□□□□□ -0.22
SMAD3-202ENST00000439724 TROAPQ12815 778 aa13.65□□□□□ -0.22
SMAD3-202ENST00000439724 STK38Q15208 465 aa13.65□□□□□ -0.22
SMAD3-202ENST00000439724 ANO1Q5XXA6 986 aa13.65□□□□□ -0.22
SMAD3-202ENST00000439724 CCAR1Q8IX12 1150 aaKnown RBP13.65□□□□□ -0.22
SMAD3-202ENST00000439724 RNF214Q8ND24 703 aa13.65□□□□□ -0.22
SMAD3-202ENST00000439724 RGS17Q9UGC6 210 aaPredicted RBP13.65□□□□□ -0.22
SMAD3-202ENST00000439724 CLIC4Q9Y696 253 aa13.65□□□□□ -0.22
SMAD3-202ENST00000439724 MMP1P03956 469 aa13.64□□□□□ -0.23
SMAD3-202ENST00000439724 MYH1P12882 1939 aa13.64□□□□□ -0.23
SMAD3-202ENST00000439724 ME1P48163 572 aa13.64□□□□□ -0.23
SMAD3-202ENST00000439724 FUT2Q10981 343 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms