RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 VEZTQ9HBM0 779 aa11.83□□□□□ -0.52
CBX5-202ENST00000439541 ZNF70Q9UC06 446 aaPredicted RBP11.83□□□□□ -0.52
CBX5-202ENST00000439541 ANAPC4Q9UJX5 808 aa11.83□□□□□ -0.52
CBX5-202ENST00000439541 BRPF3Q9ULD4 1205 aa11.83□□□□□ -0.52
CBX5-202ENST00000439541 GRIN3BO60391 1043 aa11.82□□□□□ -0.52
CBX5-202ENST00000439541 EPS15P42566 896 aa11.82□□□□□ -0.52
CBX5-202ENST00000439541 KIF4BQ2VIQ3 1234 aa11.82□□□□□ -0.52
CBX5-202ENST00000439541 SPDYE2Q495Y8 402 aa11.82□□□□□ -0.52
CBX5-202ENST00000439541 MFSD6Q6ZSS7 791 aa11.82□□□□□ -0.52
CBX5-202ENST00000439541 SH3BP5LQ7L8J4 393 aa11.82□□□□□ -0.52
CBX5-202ENST00000439541 CDAN1Q8IWY9 1227 aa11.82□□□□□ -0.52
CBX5-202ENST00000439541 NCOA7Q8NI08 942 aa11.82□□□□□ -0.52
CBX5-202ENST00000439541 DPF2Q92785 391 aa11.82□□□□□ -0.52
CBX5-202ENST00000439541 SNX21Q969T3 373 aa11.82□□□□□ -0.52
CBX5-202ENST00000439541 GPRC5DQ9NZD1 345 aa11.82□□□□□ -0.52
CBX5-202ENST00000439541 CNTNAP1P78357 1384 aa11.82□□□□□ -0.52
CBX5-202ENST00000439541 DDTLA6NHG4 134 aaPredicted RBP11.81□□□□□ -0.52
CBX5-202ENST00000439541 FAM196BA6NMK8 535 aa11.81□□□□□ -0.52
CBX5-202ENST00000439541 PRC1O43663 620 aa11.81□□□□□ -0.52
CBX5-202ENST00000439541 KDM4AO75164 1064 aa11.81□□□□□ -0.52
CBX5-202ENST00000439541 LARGE1O95461 756 aa11.81□□□□□ -0.52
CBX5-202ENST00000439541 TOB2Q14106 344 aaPredicted RBP11.81□□□□□ -0.52
CBX5-202ENST00000439541 MTMR14Q8NCE2 650 aa11.81□□□□□ -0.52
CBX5-202ENST00000439541 SPRYD3Q8NCJ5 442 aa11.81□□□□□ -0.52
CBX5-202ENST00000439541 IDI2Q9BXS1 227 aa11.81□□□□□ -0.52
CBX5-202ENST00000439541 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.81□□□□□ -0.52
CBX5-202ENST00000439541 K7ELQ4 463 aaPredicted RBP11.81□□□□□ -0.52
CBX5-202ENST00000439541 TRDNQ13061 729 aa11.81□□□□□ -0.52
CBX5-202ENST00000439541 Q6ZUG5 572 aa11.81□□□□□ -0.52
CBX5-202ENST00000439541 DHX32Q7L7V1 743 aaKnown RBP11.81□□□□□ -0.52
CBX5-202ENST00000439541 AMOTL1Q8IY63 956 aa11.81□□□□□ -0.52
CBX5-202ENST00000439541 ZKSCAN3Q9BRR0 538 aa11.81□□□□□ -0.52
CBX5-202ENST00000439541 TMOD2Q9NZR1 351 aa11.81□□□□□ -0.52
CBX5-202ENST00000439541 DTNBO60941 627 aa11.8□□□□□ -0.52
CBX5-202ENST00000439541 EXOSC10Q01780 885 aaKnown RBP11.8□□□□□ -0.52
CBX5-202ENST00000439541 FAM47AQ5JRC9 791 aa11.8□□□□□ -0.52
CBX5-202ENST00000439541 ZSCAN29Q8IWY8 852 aaPredicted RBP11.8□□□□□ -0.52
CBX5-202ENST00000439541 BRF1Q92994 677 aa11.8□□□□□ -0.52
CBX5-202ENST00000439541 RNF41Q9H4P4 317 aaPredicted RBP11.8□□□□□ -0.52
CBX5-202ENST00000439541 SENP2Q9HC62 589 aa11.8□□□□□ -0.52
CBX5-202ENST00000439541 FOXD4L1Q9NU39 408 aa11.8□□□□□ -0.52
CBX5-202ENST00000439541 H7C1D1 291 aa11.79□□□□□ -0.52
CBX5-202ENST00000439541 RANBP6O60518 1105 aaKnown RBP11.79□□□□□ -0.52
CBX5-202ENST00000439541 HMGB1P09429 215 aaKnown RBP11.79□□□□□ -0.52
CBX5-202ENST00000439541 MCM4P33991 863 aa11.79□□□□□ -0.52
CBX5-202ENST00000439541 MCM5P33992 734 aa11.79□□□□□ -0.52
CBX5-202ENST00000439541 FAM43AQ8N2R8 423 aa11.79□□□□□ -0.52
CBX5-202ENST00000439541 TMEM39BQ9GZU3 492 aa11.79□□□□□ -0.52
CBX5-202ENST00000439541 DNAJC18Q9H819 358 aa11.79□□□□□ -0.52
CBX5-202ENST00000439541 ZSWIM5Q9P217 1185 aa11.79□□□□□ -0.52
CBX5-202ENST00000439541 TPCN1Q9ULQ1 816 aa11.79□□□□□ -0.52
CBX5-202ENST00000439541 DDX11L8A8MPP1 907 aa11.79□□□□□ -0.52
CBX5-202ENST00000439541 MYO1BO43795 1136 aa11.79□□□□□ -0.52
CBX5-202ENST00000439541 NMT2O60551 498 aa11.79□□□□□ -0.52
CBX5-202ENST00000439541 HIRAP54198 1017 aaPredicted RBP11.79□□□□□ -0.52
CBX5-202ENST00000439541 FGD1P98174 961 aa11.79□□□□□ -0.52
CBX5-202ENST00000439541 APOBRQ0VD83 1088 aa11.79□□□□□ -0.52
CBX5-202ENST00000439541 C16orf86Q6ZW13 317 aa11.79□□□□□ -0.52
CBX5-202ENST00000439541 RAB11FIP4Q86YS3 637 aa11.79□□□□□ -0.52
CBX5-202ENST00000439541 TMX3Q96JJ7 454 aa11.79□□□□□ -0.52
CBX5-202ENST00000439541 KRT23Q9C075 422 aa11.79□□□□□ -0.52
CBX5-202ENST00000439541 CNNM2Q9H8M5 875 aa11.79□□□□□ -0.52
CBX5-202ENST00000439541 HACL1Q9UJ83 578 aa11.79□□□□□ -0.52
CBX5-202ENST00000439541 ATRNL1Q5VV63 1379 aa11.78□□□□□ -0.52
CBX5-202ENST00000439541 ORC4O43929 436 aa11.78□□□□□ -0.52
CBX5-202ENST00000439541 ENTPD3O75355 529 aa11.78□□□□□ -0.52
CBX5-202ENST00000439541 SLC3A2P08195 630 aaKnown RBP11.78□□□□□ -0.52
CBX5-202ENST00000439541 FGRP09769 529 aa11.78□□□□□ -0.52
CBX5-202ENST00000439541 RASA1P20936 1047 aa11.78□□□□□ -0.52
CBX5-202ENST00000439541 PTMSP20962 102 aa11.78□□□□□ -0.52
CBX5-202ENST00000439541 CDK8P49336 464 aa11.78□□□□□ -0.52
CBX5-202ENST00000439541 GABPAQ06546 454 aa11.78□□□□□ -0.52
CBX5-202ENST00000439541 PDE4BQ07343 736 aa11.78□□□□□ -0.52
CBX5-202ENST00000439541 ST3GAL1Q11201 340 aa11.78□□□□□ -0.52
CBX5-202ENST00000439541 SHROOM1Q2M3G4 852 aaPredicted RBP11.78□□□□□ -0.52
CBX5-202ENST00000439541 ESR2Q92731 530 aa11.78□□□□□ -0.52
CBX5-202ENST00000439541 RTN4Q9NQC3 1192 aaKnown RBP11.78□□□□□ -0.52
CBX5-202ENST00000439541 GGA3Q9NZ52 723 aa11.78□□□□□ -0.52
CBX5-202ENST00000439541 CIZ1Q9ULV3 898 aaPredicted RBP11.78□□□□□ -0.52
CBX5-202ENST00000439541 COL2A1P02458 1487 aaPredicted RBP11.78□□□□□ -0.52
CBX5-202ENST00000439541 SH2B2O14492 632 aaPredicted RBP11.77□□□□□ -0.52
CBX5-202ENST00000439541 HLA-DOAP06340 250 aa11.77□□□□□ -0.52
CBX5-202ENST00000439541 LMOD1P29536 600 aaPredicted RBP11.77□□□□□ -0.52
CBX5-202ENST00000439541 STK3Q13188 491 aa11.77□□□□□ -0.52
CBX5-202ENST00000439541 ANGEL2Q5VTE6 544 aaKnown RBP11.77□□□□□ -0.52
CBX5-202ENST00000439541 TTC6Q86TZ1 520 aa11.77□□□□□ -0.52
CBX5-202ENST00000439541 NECAB1Q8N987 351 aa11.77□□□□□ -0.52
CBX5-202ENST00000439541 CSRNP1Q96S65 589 aa11.77□□□□□ -0.52
CBX5-202ENST00000439541 MKNK2Q9HBH9 465 aa11.77□□□□□ -0.52
CBX5-202ENST00000439541 SERPINB13Q9UIV8 391 aa11.77□□□□□ -0.52
CBX5-202ENST00000439541 ISY1Q9ULR0 285 aaKnown RBP11.77□□□□□ -0.52
CBX5-202ENST00000439541 TSPY2A6NKD2 308 aa11.76□□□□□ -0.53
CBX5-202ENST00000439541 SHMT1P34896 483 aa11.76□□□□□ -0.53
CBX5-202ENST00000439541 RASA3Q14644 834 aa11.76□□□□□ -0.53
CBX5-202ENST00000439541 ME3Q16798 604 aa11.76□□□□□ -0.53
CBX5-202ENST00000439541 TMEM67Q5HYA8 995 aa11.76□□□□□ -0.53
CBX5-202ENST00000439541 CLEC10AQ8IUN9 316 aa11.76□□□□□ -0.53
CBX5-202ENST00000439541 LY9Q9HBG7 655 aa11.76□□□□□ -0.53
CBX5-202ENST00000439541 NAP1L2Q9ULW6 460 aaPredicted RBP11.76□□□□□ -0.53
CBX5-202ENST00000439541 LIMCH1Q9UPQ0 1083 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms