RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 ZNF215Q9UL58 517 aaPredicted RBP16.8■□□□□ 0.28
TSC2-206ENST00000439117 PNMA6EA0A0J9YXQ4 647 aa16.79■□□□□ 0.28
TSC2-206ENST00000439117 RUFY3Q7L099 469 aa16.79■□□□□ 0.28
TSC2-206ENST00000439117 OTUD7AQ8TE49 926 aaPredicted RBP16.79■□□□□ 0.28
TSC2-206ENST00000439117 KCNK9Q9NPC2 374 aa16.79■□□□□ 0.28
TSC2-206ENST00000439117 KCNQ3O43525 872 aa16.79■□□□□ 0.28
TSC2-206ENST00000439117 IGSF22Q8N9C0 903 aa16.79■□□□□ 0.28
TSC2-206ENST00000439117 MICAL1Q8TDZ2 1067 aa16.79■□□□□ 0.28
TSC2-206ENST00000439117 ZBTB9Q96C00 473 aa16.79■□□□□ 0.28
TSC2-206ENST00000439117 DNAI2Q9GZS0 605 aa16.79■□□□□ 0.28
TSC2-206ENST00000439117 DHX58Q96C10 678 aa16.79■□□□□ 0.28
TSC2-206ENST00000439117 SEC62Q99442 399 aaKnown RBP16.79■□□□□ 0.28
TSC2-206ENST00000439117 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.79■□□□□ 0.28
TSC2-206ENST00000439117 HIBADHP31937 336 aaKnown RBP16.79■□□□□ 0.28
TSC2-206ENST00000439117 CALCOCO2Q13137 446 aa16.79■□□□□ 0.28
TSC2-206ENST00000439117 XAGE2Q96GT9 111 aa16.79■□□□□ 0.28
TSC2-206ENST00000439117 FAM184BQ9ULE4 1060 aa16.79■□□□□ 0.28
TSC2-206ENST00000439117 ABCC3O15438 1527 aa16.79■□□□□ 0.28
TSC2-206ENST00000439117 MBD4O95243 580 aa16.78■□□□□ 0.28
TSC2-206ENST00000439117 AOX1Q06278 1338 aa16.78■□□□□ 0.28
TSC2-206ENST00000439117 NEDD9Q14511 834 aa16.78■□□□□ 0.28
TSC2-206ENST00000439117 RPAINQ86UA6 219 aa16.78■□□□□ 0.28
TSC2-206ENST00000439117 JAG2Q9Y219 1238 aa16.78■□□□□ 0.28
TSC2-206ENST00000439117 SLC8A1P32418 973 aa16.78■□□□□ 0.28
TSC2-206ENST00000439117 WHAMMP3Q1A5X7 153 aa16.78■□□□□ 0.28
TSC2-206ENST00000439117 RNF168Q8IYW5 571 aaPredicted RBP16.78■□□□□ 0.28
TSC2-206ENST00000439117 NEK11Q8NG66 645 aa16.78■□□□□ 0.28
TSC2-206ENST00000439117 USP6P35125 1406 aa16.78■□□□□ 0.28
TSC2-206ENST00000439117 EFCAB8A8MWE9 144 aa16.78■□□□□ 0.28
TSC2-206ENST00000439117 UFL1O94874 794 aa16.78■□□□□ 0.28
TSC2-206ENST00000439117 TCIRG1Q13488 830 aa16.78■□□□□ 0.28
TSC2-206ENST00000439117 CYP26C1Q6V0L0 522 aa16.78■□□□□ 0.28
TSC2-206ENST00000439117 TMTC1Q8IUR5 882 aa16.78■□□□□ 0.28
TSC2-206ENST00000439117 VCX3BQ9H321 246 aa16.78■□□□□ 0.28
TSC2-206ENST00000439117 CAPN7Q9Y6W3 813 aa16.78■□□□□ 0.28
TSC2-206ENST00000439117 ERCC6LQ2NKX8 1250 aa16.78■□□□□ 0.28
TSC2-206ENST00000439117 JAKMIP2Q96AA8 810 aa16.78■□□□□ 0.28
TSC2-206ENST00000439117 RTL9Q8NET4 1388 aa16.78■□□□□ 0.28
TSC2-206ENST00000439117 PTPDC1A2A3K4 754 aa16.77■□□□□ 0.28
TSC2-206ENST00000439117 CIB2O75838 187 aa16.77■□□□□ 0.28
TSC2-206ENST00000439117 CHST3Q7LGC8 479 aa16.77■□□□□ 0.28
TSC2-206ENST00000439117 VEZTQ9HBM0 779 aa16.77■□□□□ 0.28
TSC2-206ENST00000439117 MED4Q9NPJ6 270 aa16.77■□□□□ 0.28
TSC2-206ENST00000439117 ANAPC4Q9UJX5 808 aa16.77■□□□□ 0.28
TSC2-206ENST00000439117 STX17P56962 302 aa16.77■□□□□ 0.28
TSC2-206ENST00000439117 HEATR3Q7Z4Q2 680 aa16.77■□□□□ 0.28
TSC2-206ENST00000439117 BAIAP2L1Q9UHR4 511 aa16.77■□□□□ 0.28
TSC2-206ENST00000439117 SMIM23A6NLE4 172 aa16.77■□□□□ 0.28
TSC2-206ENST00000439117 PLA2R1Q13018 1463 aa16.77■□□□□ 0.28
TSC2-206ENST00000439117 ARAP3Q8WWN8 1544 aa16.77■□□□□ 0.27
TSC2-206ENST00000439117 PRR36Q9H6K5 1346 aa16.77■□□□□ 0.27
TSC2-206ENST00000439117 NEURL1BA8MQ27 555 aa16.77■□□□□ 0.27
TSC2-206ENST00000439117 FERMT1Q9BQL6 677 aa16.77■□□□□ 0.27
TSC2-206ENST00000439117 WWC3Q9ULE0 1092 aa16.77■□□□□ 0.27
TSC2-206ENST00000439117 PAK2Q13177 524 aa16.76■□□□□ 0.27
TSC2-206ENST00000439117 LPIN2Q92539 896 aa16.76■□□□□ 0.27
TSC2-206ENST00000439117 KIF24Q5T7B8 1368 aa16.76■□□□□ 0.27
TSC2-206ENST00000439117 ARHGAP31Q2M1Z3 1444 aa16.76■□□□□ 0.27
TSC2-206ENST00000439117 APOBRQ0VD83 1088 aa16.76■□□□□ 0.27
TSC2-206ENST00000439117 TTC6Q86TZ1 520 aa16.76■□□□□ 0.27
TSC2-206ENST00000439117 ERBB4Q15303 1308 aa16.76■□□□□ 0.27
TSC2-206ENST00000439117 IGSF1Q8N6C5 1336 aa16.76■□□□□ 0.27
TSC2-206ENST00000439117 A0A1B0GVL5 298 aa16.75■□□□□ 0.27
TSC2-206ENST00000439117 ETF1P62495 437 aaKnown RBP16.75■□□□□ 0.27
TSC2-206ENST00000439117 ASIC1P78348 528 aa16.75■□□□□ 0.27
TSC2-206ENST00000439117 RBBP5Q15291 538 aaKnown RBP16.75■□□□□ 0.27
TSC2-206ENST00000439117 GGA1Q9UJY5 639 aa16.75■□□□□ 0.27
TSC2-206ENST00000439117 MTUS1Q9ULD2 1270 aa16.75■□□□□ 0.27
TSC2-206ENST00000439117 BRD1O95696 1058 aa16.75■□□□□ 0.27
TSC2-206ENST00000439117 ARID4AP29374 1257 aaPredicted RBP16.75■□□□□ 0.27
TSC2-206ENST00000439117 KRI1Q8N9T8 703 aaKnown RBP16.75■□□□□ 0.27
TSC2-206ENST00000439117 PLEKHF1Q96S99 279 aa16.75■□□□□ 0.27
TSC2-206ENST00000439117 CARD10Q9BWT7 1032 aa16.75■□□□□ 0.27
TSC2-206ENST00000439117 PPP1R2P41236 205 aa16.75■□□□□ 0.27
TSC2-206ENST00000439117 NAPAP54920 295 aa16.75■□□□□ 0.27
TSC2-206ENST00000439117 IQUBQ8NA54 791 aa16.75■□□□□ 0.27
TSC2-206ENST00000439117 APPBP2Q92624 585 aa16.75■□□□□ 0.27
TSC2-206ENST00000439117 ACTN4O43707 911 aaKnown RBP16.75■□□□□ 0.27
TSC2-206ENST00000439117 SH2D4BQ5SQS7 431 aa16.75■□□□□ 0.27
TSC2-206ENST00000439117 ABCC4O15439 1325 aa16.75■□□□□ 0.27
TSC2-206ENST00000439117 CALML3P27482 149 aa16.74■□□□□ 0.27
TSC2-206ENST00000439117 VSIG1Q86XK7 387 aa16.74■□□□□ 0.27
TSC2-206ENST00000439117 KIF1BO60333 1816 aa16.74■□□□□ 0.27
TSC2-206ENST00000439117 ARHGAP24Q8N264 748 aa16.74■□□□□ 0.27
TSC2-206ENST00000439117 SPATS2LQ9NUQ6 558 aaKnown RBP16.74■□□□□ 0.27
TSC2-206ENST00000439117 SHROOM2Q13796 1616 aa16.74■□□□□ 0.27
TSC2-206ENST00000439117 CCDC174Q6PII3 467 aa16.74■□□□□ 0.27
TSC2-206ENST00000439117 SND1Q7KZF4 910 aaKnown RBP eCLIP16.74■□□□□ 0.27
TSC2-206ENST00000439117 MLKLQ8NB16 471 aa16.74■□□□□ 0.27
TSC2-206ENST00000439117 FAM71BQ8TC56 605 aa16.74■□□□□ 0.27
TSC2-206ENST00000439117 USP44Q9H0E7 712 aa16.74■□□□□ 0.27
TSC2-206ENST00000439117 SAMM50Q9Y512 469 aa16.74■□□□□ 0.27
TSC2-206ENST00000439117 KDM5CP41229 1560 aa16.74■□□□□ 0.27
TSC2-206ENST00000439117 TEX11Q8IYF3 940 aa16.74■□□□□ 0.27
TSC2-206ENST00000439117 KBTBD3Q8NAB2 608 aa16.74■□□□□ 0.27
TSC2-206ENST00000439117 RRP15Q9Y3B9 282 aaKnown RBP16.73■□□□□ 0.27
TSC2-206ENST00000439117 TBCAO75347 108 aaKnown RBP16.73■□□□□ 0.27
TSC2-206ENST00000439117 TAF5LO75529 589 aa16.73■□□□□ 0.27
TSC2-206ENST00000439117 ZNF853P0CG23 659 aa16.73■□□□□ 0.27
TSC2-206ENST00000439117 EFCAB13Q8IY85 973 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms