RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 FLT1P17948 1338 aa16.88■□□□□ 0.29
PRAME-209ENST00000439106 NPM3O75607 178 aaKnown RBP16.87■□□□□ 0.29
PRAME-209ENST00000439106 SP3Q02447 781 aa16.87■□□□□ 0.29
PRAME-209ENST00000439106 CHMP4BQ9H444 224 aaKnown RBP16.87■□□□□ 0.29
PRAME-209ENST00000439106 PICK1Q9NRD5 415 aa16.87■□□□□ 0.29
PRAME-209ENST00000439106 SAP30BPQ9UHR5 308 aaKnown RBP16.87■□□□□ 0.29
PRAME-209ENST00000439106 ZHX2Q9Y6X8 837 aa16.87■□□□□ 0.29
PRAME-209ENST00000439106 MAP4K4O95819 1239 aaPredicted RBP16.86■□□□□ 0.29
PRAME-209ENST00000439106 PPP4CP60510 307 aa16.86■□□□□ 0.29
PRAME-209ENST00000439106 FBXO46Q6PJ61 603 aaPredicted RBP16.86■□□□□ 0.29
PRAME-209ENST00000439106 ERO1AQ96HE7 468 aa16.86■□□□□ 0.29
PRAME-209ENST00000439106 ARHGAP39Q9C0H5 1083 aa16.86■□□□□ 0.29
PRAME-209ENST00000439106 PALD1Q9ULE6 856 aa16.86■□□□□ 0.29
PRAME-209ENST00000439106 PDE4DIPQ5VU43 2346 aa16.86■□□□□ 0.29
PRAME-209ENST00000439106 TRIM75PA6NK02 468 aa16.85■□□□□ 0.29
PRAME-209ENST00000439106 PDHXO00330 501 aa16.85■□□□□ 0.29
PRAME-209ENST00000439106 GOLIM4O00461 696 aa16.85■□□□□ 0.29
PRAME-209ENST00000439106 CTNND1O60716 968 aaKnown RBP16.85■□□□□ 0.29
PRAME-209ENST00000439106 RAB11FIP3O75154 756 aa16.85■□□□□ 0.29
PRAME-209ENST00000439106 PLCG2P16885 1265 aa16.85■□□□□ 0.29
PRAME-209ENST00000439106 PKN2Q16513 984 aaKnown RBP16.85■□□□□ 0.29
PRAME-209ENST00000439106 SHROOM1Q2M3G4 852 aaPredicted RBP16.85■□□□□ 0.29
PRAME-209ENST00000439106 DNAJC18Q9H819 358 aa16.85■□□□□ 0.29
PRAME-209ENST00000439106 CPA4Q9UI42 421 aa16.85■□□□□ 0.29
PRAME-209ENST00000439106 RBBP6Q7Z6E9 1792 aaKnown RBP16.84■□□□□ 0.29
PRAME-209ENST00000439106 TBC1D12O60347 775 aa16.84■□□□□ 0.29
PRAME-209ENST00000439106 TLR2O60603 784 aa16.84■□□□□ 0.29
PRAME-209ENST00000439106 RRP1P56182 461 aaKnown RBP16.84■□□□□ 0.29
PRAME-209ENST00000439106 MAP3K12Q12852 859 aa16.84■□□□□ 0.29
PRAME-209ENST00000439106 SLFNL1Q499Z3 407 aa16.84■□□□□ 0.29
PRAME-209ENST00000439106 GPAT2Q6NUI2 795 aa16.84■□□□□ 0.29
PRAME-209ENST00000439106 GADL1Q6ZQY3 521 aa16.84■□□□□ 0.29
PRAME-209ENST00000439106 ANKRD23Q86SG2 305 aa16.84■□□□□ 0.29
PRAME-209ENST00000439106 BOLA2Q9H3K6 86 aa16.84■□□□□ 0.29
PRAME-209ENST00000439106 AFG3L2Q9Y4W6 797 aa16.84■□□□□ 0.29
PRAME-209ENST00000439106 CYP2C8P10632 490 aa16.83■□□□□ 0.28
PRAME-209ENST00000439106 PDE6AP16499 860 aa16.83■□□□□ 0.28
PRAME-209ENST00000439106 ADGRA2Q96PE1 1338 aa16.83■□□□□ 0.28
PRAME-209ENST00000439106 LRRCC1Q9C099 1032 aa16.83■□□□□ 0.28
PRAME-209ENST00000439106 EFCC1Q9HA90 598 aa16.83■□□□□ 0.28
PRAME-209ENST00000439106 TNRC18O15417 2968 aaPredicted RBP16.83■□□□□ 0.28
PRAME-209ENST00000439106 A0A0G2JLL6 359 aaPredicted RBP16.82■□□□□ 0.28
PRAME-209ENST00000439106 CXCL11O14625 94 aa16.82■□□□□ 0.28
PRAME-209ENST00000439106 GDF11O95390 407 aa16.82■□□□□ 0.28
PRAME-209ENST00000439106 CHGBP05060 677 aa16.82■□□□□ 0.28
PRAME-209ENST00000439106 CAP2P40123 477 aa16.82■□□□□ 0.28
PRAME-209ENST00000439106 USP5P45974 858 aa16.82■□□□□ 0.28
PRAME-209ENST00000439106 JAG1P78504 1218 aa16.82■□□□□ 0.28
PRAME-209ENST00000439106 SLC9C2Q5TAH2 1124 aa16.82■□□□□ 0.28
PRAME-209ENST00000439106 PRRT2Q7Z6L0 340 aaPredicted RBP16.82■□□□□ 0.28
PRAME-209ENST00000439106 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.82■□□□□ 0.28
PRAME-209ENST00000439106 DHX36Q9H2U1 1008 aaKnown RBP16.82■□□□□ 0.28
PRAME-209ENST00000439106 ZCCHC17Q9NP64 241 aaKnown RBP16.82■□□□□ 0.28
PRAME-209ENST00000439106 PI4KBQ9UBF8 816 aa16.82■□□□□ 0.28
PRAME-209ENST00000439106 PTPN22Q9Y2R2 807 aa16.82■□□□□ 0.28
PRAME-209ENST00000439106 ZNF532Q9HCE3 1301 aa16.81■□□□□ 0.28
PRAME-209ENST00000439106 CTGFP29279 349 aa16.81■□□□□ 0.28
PRAME-209ENST00000439106 TTF1Q15361 905 aaPredicted RBP16.81■□□□□ 0.28
PRAME-209ENST00000439106 CRACR2BQ8N4Y2 399 aaPredicted RBP16.81■□□□□ 0.28
PRAME-209ENST00000439106 RIOK1Q9BRS2 568 aaKnown RBP16.81■□□□□ 0.28
PRAME-209ENST00000439106 PAG1Q9NWQ8 432 aa16.81■□□□□ 0.28
PRAME-209ENST00000439106 HERC5Q9UII4 1024 aaKnown RBP16.81■□□□□ 0.28
PRAME-209ENST00000439106 PCDHB15Q9Y5E8 787 aa16.81■□□□□ 0.28
PRAME-209ENST00000439106 BRCA2P51587 3418 aa16.8■□□□□ 0.28
PRAME-209ENST00000439106 RGS19P49795 217 aa16.8■□□□□ 0.28
PRAME-209ENST00000439106 LACTBP83111 547 aaPredicted RBP16.8■□□□□ 0.28
PRAME-209ENST00000439106 EVX2Q03828 476 aa16.8■□□□□ 0.28
PRAME-209ENST00000439106 TREML2Q5T2D2 321 aa16.8■□□□□ 0.28
PRAME-209ENST00000439106 TSHZ3Q63HK5 1081 aa16.8■□□□□ 0.28
PRAME-209ENST00000439106 C17orf99Q6UX52 265 aa16.8■□□□□ 0.28
PRAME-209ENST00000439106 CRBNQ96SW2 442 aa16.8■□□□□ 0.28
PRAME-209ENST00000439106 MAGEB6P1A0A0J9YX57 407 aa16.79■□□□□ 0.28
PRAME-209ENST00000439106 TCRBV5S4A2TA0A5A2 114 aa16.79■□□□□ 0.28
PRAME-209ENST00000439106 IGSF3O75054 1194 aa16.79■□□□□ 0.28
PRAME-209ENST00000439106 ATP5JP18859 108 aa16.79■□□□□ 0.28
PRAME-209ENST00000439106 MLLT1Q03111 559 aaPredicted RBP16.79■□□□□ 0.28
PRAME-209ENST00000439106 SPP2Q13103 211 aa16.79■□□□□ 0.28
PRAME-209ENST00000439106 LCORLQ8N3X6 602 aa16.79■□□□□ 0.28
PRAME-209ENST00000439106 TRIM34Q9BYJ4 488 aa16.79■□□□□ 0.28
PRAME-209ENST00000439106 PTCH2Q9Y6C5 1203 aa16.79■□□□□ 0.28
PRAME-209ENST00000439106 HLA-DOAP06340 250 aa16.78■□□□□ 0.28
PRAME-209ENST00000439106 HMGCS2P54868 508 aa16.78■□□□□ 0.28
PRAME-209ENST00000439106 FASTKD5Q7L8L6 764 aaKnown RBP16.78■□□□□ 0.28
PRAME-209ENST00000439106 SDR42E1Q8WUS8 393 aa16.78■□□□□ 0.28
PRAME-209ENST00000439106 PARK7Q99497 189 aaKnown RBP16.78■□□□□ 0.28
PRAME-209ENST00000439106 HAUS7Q99871 368 aa16.78■□□□□ 0.28
PRAME-209ENST00000439106 DCTPP1Q9H773 170 aa16.78■□□□□ 0.28
PRAME-209ENST00000439106 USP17L5A8MUK1 530 aa16.77■□□□□ 0.28
PRAME-209ENST00000439106 METTL16Q86W50 562 aaKnown RBP16.77■□□□□ 0.28
PRAME-209ENST00000439106 FOXP4Q8IVH2 680 aaPredicted RBP16.77■□□□□ 0.28
PRAME-209ENST00000439106 ZNF280CQ8ND82 737 aa16.77■□□□□ 0.28
PRAME-209ENST00000439106 ARMT1Q9H993 441 aa16.77■□□□□ 0.28
PRAME-209ENST00000439106 BCRP11274 1271 aa16.76■□□□□ 0.27
PRAME-209ENST00000439106 ADD2P35612 726 aa16.76■□□□□ 0.27
PRAME-209ENST00000439106 PLCD1P51178 756 aa16.76■□□□□ 0.27
PRAME-209ENST00000439106 MTMR2Q13614 643 aa16.76■□□□□ 0.27
PRAME-209ENST00000439106 KIF22Q14807 665 aa16.76■□□□□ 0.27
PRAME-209ENST00000439106 TRIM47Q96LD4 638 aa16.76■□□□□ 0.27
PRAME-209ENST00000439106 ZBTB21Q9ULJ3 1066 aa16.76■□□□□ 0.27
PRAME-209ENST00000439106 AGTPBP1Q9UPW5 1226 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms