RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 ALG1LQ6GMV1 187 aa5.61□□□□□ -1.51
HMGB1P18-201ENST00000438801 LLGL2Q6P1M3 1020 aa5.61□□□□□ -1.51
HMGB1P18-201ENST00000438801 FAM214BQ7L5A3 538 aa5.61□□□□□ -1.51
HMGB1P18-201ENST00000438801 ATG4DQ86TL0 474 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P18-201ENST00000438801 C12orf40Q86WS4 652 aa5.61□□□□□ -1.51
HMGB1P18-201ENST00000438801 HEXIM2Q96MH2 286 aaKnown RBP5.61□□□□□ -1.51
HMGB1P18-201ENST00000438801 RC3H2Q9HBD1 1191 aaKnown RBP5.61□□□□□ -1.51
HMGB1P18-201ENST00000438801 PICK1Q9NRD5 415 aa5.61□□□□□ -1.51
HMGB1P18-201ENST00000438801 MBNL3Q9NUK0 354 aaKnown RBP5.61□□□□□ -1.51
HMGB1P18-201ENST00000438801 BICRAQ9NZM4 1560 aa5.6□□□□□ -1.51
HMGB1P18-201ENST00000438801 FANCGO15287 622 aa5.6□□□□□ -1.51
HMGB1P18-201ENST00000438801 FZD5Q13467 585 aa5.6□□□□□ -1.51
HMGB1P18-201ENST00000438801 UBE3DQ7Z6J8 389 aa5.6□□□□□ -1.51
HMGB1P18-201ENST00000438801 PI4K2BQ8TCG2 481 aa5.6□□□□□ -1.51
HMGB1P18-201ENST00000438801 ANKRD24Q8TF21 1146 aa5.6□□□□□ -1.51
HMGB1P18-201ENST00000438801 ASB16Q96NS5 453 aa5.6□□□□□ -1.51
HMGB1P18-201ENST00000438801 TNKS2Q9H2K2 1166 aa5.6□□□□□ -1.51
HMGB1P18-201ENST00000438801 PRDM10Q9NQV6 1147 aa5.6□□□□□ -1.51
HMGB1P18-201ENST00000438801 GTF2IRD1Q9UHL9 959 aa5.6□□□□□ -1.51
HMGB1P18-201ENST00000438801 ADAMTS6Q9UKP5 1117 aa5.6□□□□□ -1.51
HMGB1P18-201ENST00000438801 WWC3Q9ULE0 1092 aa5.6□□□□□ -1.51
HMGB1P18-201ENST00000438801 PCDHA4Q9UN74 947 aa5.6□□□□□ -1.51
HMGB1P18-201ENST00000438801 SNX11Q9Y5W9 270 aa5.6□□□□□ -1.51
HMGB1P18-201ENST00000438801 IVNS1ABPQ9Y6Y0 642 aa5.6□□□□□ -1.51
HMGB1P18-201ENST00000438801 CARMIL2Q6F5E8 1435 aa5.59□□□□□ -1.51
HMGB1P18-201ENST00000438801 C8AP07357 584 aa5.59□□□□□ -1.51
HMGB1P18-201ENST00000438801 ATP2B2Q01814 1243 aa5.59□□□□□ -1.51
HMGB1P18-201ENST00000438801 ZBTB37Q5TC79 503 aa5.59□□□□□ -1.51
HMGB1P18-201ENST00000438801 RASIP1Q5U651 963 aa5.59□□□□□ -1.51
HMGB1P18-201ENST00000438801 ANGEL2Q5VTE6 544 aaKnown RBP5.59□□□□□ -1.51
HMGB1P18-201ENST00000438801 SCARA3Q6AZY7 606 aa5.59□□□□□ -1.51
HMGB1P18-201ENST00000438801 CDC37L1Q7L3B6 337 aa5.59□□□□□ -1.51
HMGB1P18-201ENST00000438801 CYP8B1Q9UNU6 501 aa5.59□□□□□ -1.51
HMGB1P18-201ENST00000438801 SPG7Q9UQ90 795 aa5.59□□□□□ -1.51
HMGB1P18-201ENST00000438801 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P18-201ENST00000438801 KRTAP4-8A0A0G2JLE6 195 aa5.58□□□□□ -1.52
HMGB1P18-201ENST00000438801 IGF2BP3O00425 579 aaKnown RBP eCLIP5.58□□□□□ -1.52
HMGB1P18-201ENST00000438801 CELA3AP09093 270 aa5.58□□□□□ -1.52
HMGB1P18-201ENST00000438801 KCT2Q8NC54 265 aa5.58□□□□□ -1.52
HMGB1P18-201ENST00000438801 LRRN4CLQ8ND94 238 aa5.58□□□□□ -1.52
HMGB1P18-201ENST00000438801 ASB11Q8WXH4 323 aa5.58□□□□□ -1.52
HMGB1P18-201ENST00000438801 ELMO3Q96BJ8 720 aa5.58□□□□□ -1.52
HMGB1P18-201ENST00000438801 C12orf49Q9H741 205 aa5.58□□□□□ -1.52
HMGB1P18-201ENST00000438801 EOMESO95936 686 aa5.57□□□□□ -1.52
HMGB1P18-201ENST00000438801 USP17L7P0C7H9 530 aa5.57□□□□□ -1.52
HMGB1P18-201ENST00000438801 KCNA1Q09470 495 aa5.57□□□□□ -1.52
HMGB1P18-201ENST00000438801 PCNX4Q63HM2 1172 aa5.57□□□□□ -1.52
HMGB1P18-201ENST00000438801 SLC23A3Q6PIS1 610 aa5.57□□□□□ -1.52
HMGB1P18-201ENST00000438801 FAM168AQ92567 244 aa5.57□□□□□ -1.52
HMGB1P18-201ENST00000438801 FAM8A1Q9UBU6 413 aa5.57□□□□□ -1.52
HMGB1P18-201ENST00000438801 TIMELESSQ9UNS1 1208 aa5.57□□□□□ -1.52
HMGB1P18-201ENST00000438801 GNAT3A8MTJ3 354 aa5.56□□□□□ -1.52
HMGB1P18-201ENST00000438801 LRIG2O94898 1065 aa5.56□□□□□ -1.52
HMGB1P18-201ENST00000438801 JAG1P78504 1218 aa5.56□□□□□ -1.52
HMGB1P18-201ENST00000438801 INPP5AQ14642 412 aa5.56□□□□□ -1.52
HMGB1P18-201ENST00000438801 NKPD1Q17RQ9 610 aa5.56□□□□□ -1.52
HMGB1P18-201ENST00000438801 ARMCX6Q7L4S7 300 aa5.56□□□□□ -1.52
HMGB1P18-201ENST00000438801 SPACA3Q8IXA5 215 aa5.56□□□□□ -1.52
HMGB1P18-201ENST00000438801 ZNF507Q8TCN5 953 aa5.56□□□□□ -1.52
HMGB1P18-201ENST00000438801 PRDM7Q9NQW5 492 aa5.56□□□□□ -1.52
HMGB1P18-201ENST00000438801 THOC2Q8NI27 1593 aaKnown RBP5.55□□□□□ -1.52
HMGB1P18-201ENST00000438801 PRAMEF27A3QJZ7 478 aa5.55□□□□□ -1.52
HMGB1P18-201ENST00000438801 P4HBP07237 508 aaKnown RBP5.55□□□□□ -1.52
HMGB1P18-201ENST00000438801 ZP2Q05996 745 aa5.55□□□□□ -1.52
HMGB1P18-201ENST00000438801 PTPN11Q06124 597 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P18-201ENST00000438801 IKZF1Q13422 519 aa5.55□□□□□ -1.52
HMGB1P18-201ENST00000438801 ZNF648Q5T619 568 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P18-201ENST00000438801 LRFN4Q6PJG9 635 aa5.55□□□□□ -1.52
HMGB1P18-201ENST00000438801 SV2BQ7L1I2 683 aa5.55□□□□□ -1.52
HMGB1P18-201ENST00000438801 TMEM40Q8WWA1 233 aa5.55□□□□□ -1.52
HMGB1P18-201ENST00000438801 PRDM5Q9NQX1 630 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P18-201ENST00000438801 ARID1BQ8NFD5 2236 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P18-201ENST00000438801 ARAP1Q96P48 1450 aa5.54□□□□□ -1.52
HMGB1P18-201ENST00000438801 CLCN7P51798 805 aa5.54□□□□□ -1.52
HMGB1P18-201ENST00000438801 CYFIP1Q7L576 1253 aa5.54□□□□□ -1.52
HMGB1P18-201ENST00000438801 HDXQ7Z353 690 aa5.54□□□□□ -1.52
HMGB1P18-201ENST00000438801 PLPPR2Q96GM1 343 aa5.54□□□□□ -1.52
HMGB1P18-201ENST00000438801 FRMD6Q96NE9 622 aa5.54□□□□□ -1.52
HMGB1P18-201ENST00000438801 FOXQ1Q9C009 403 aa5.54□□□□□ -1.52
HMGB1P18-201ENST00000438801 FBRSQ9HAH7 460 aa5.54□□□□□ -1.52
HMGB1P18-201ENST00000438801 TTF2Q9UNY4 1162 aaKnown RBP5.54□□□□□ -1.52
HMGB1P18-201ENST00000438801 MAPK8IP1Q9UQF2 711 aa5.54□□□□□ -1.52
HMGB1P18-201ENST00000438801 PITPNM2Q9BZ72 1349 aa5.53□□□□□ -1.52
HMGB1P18-201ENST00000438801 FARP2O94887 1054 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P18-201ENST00000438801 SLITRK5O94991 958 aa5.53□□□□□ -1.52
HMGB1P18-201ENST00000438801 LDHBP07195 334 aaKnown RBP5.53□□□□□ -1.52
HMGB1P18-201ENST00000438801 SLBPQ14493 270 aaKnown RBP eCLIP5.53□□□□□ -1.52
HMGB1P18-201ENST00000438801 TTBK2Q6IQ55 1244 aa5.53□□□□□ -1.52
HMGB1P18-201ENST00000438801 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P18-201ENST00000438801 FLAD1Q8NFF5 587 aa5.53□□□□□ -1.52
HMGB1P18-201ENST00000438801 GAL3ST3Q96A11 431 aa5.53□□□□□ -1.52
HMGB1P18-201ENST00000438801 WNT10AQ9GZT5 417 aa5.53□□□□□ -1.52
HMGB1P18-201ENST00000438801 EIF4BP23588 611 aaKnown RBP5.52□□□□□ -1.53
HMGB1P18-201ENST00000438801 ETF1P62495 437 aaKnown RBP5.52□□□□□ -1.53
HMGB1P18-201ENST00000438801 WIPI1Q5MNZ9 446 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P18-201ENST00000438801 MFSD2AQ8NA29 543 aa5.52□□□□□ -1.53
HMGB1P18-201ENST00000438801 MIPEPQ99797 713 aa5.52□□□□□ -1.53
HMGB1P18-201ENST00000438801 TPX2Q9ULW0 747 aaKnown RBP5.52□□□□□ -1.53
HMGB1P18-201ENST00000438801 SNCAIPQ9Y6H5 919 aa5.52□□□□□ -1.53
HMGB1P18-201ENST00000438801 PRR33A8MZF0 331 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms