RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 CHMP4CQ96CF2 233 aa16.12■□□□□ 0.17
PTCHD3-201ENST00000438700 LTBP1Q14766 1721 aa16.12■□□□□ 0.17
PTCHD3-201ENST00000438700 MICU3Q86XE3 530 aa16.11■□□□□ 0.17
PTCHD3-201ENST00000438700 KIAA1524Q8TCG1 905 aa16.11■□□□□ 0.17
PTCHD3-201ENST00000438700 ZBTB22O15209 634 aa16.11■□□□□ 0.17
PTCHD3-201ENST00000438700 ZNF165P49910 485 aa16.11■□□□□ 0.17
PTCHD3-201ENST00000438700 SLC15A2Q16348 729 aa16.11■□□□□ 0.17
PTCHD3-201ENST00000438700 CCDC73Q6ZRK6 1079 aa16.11■□□□□ 0.17
PTCHD3-201ENST00000438700 FBXO18Q8NFZ0 1043 aa16.11■□□□□ 0.17
PTCHD3-201ENST00000438700 AIFM3Q96NN9 605 aa16.11■□□□□ 0.17
PTCHD3-201ENST00000438700 PODXL2Q9NZ53 605 aa16.11■□□□□ 0.17
PTCHD3-201ENST00000438700 POLLQ9UGP5 575 aa16.11■□□□□ 0.17
PTCHD3-201ENST00000438700 BAZ2AQ9UIF9 1905 aaKnown RBP16.1■□□□□ 0.17
PTCHD3-201ENST00000438700 A0A087WWV3 80 aa16.1■□□□□ 0.17
PTCHD3-201ENST00000438700 NPR1P16066 1061 aa16.1■□□□□ 0.17
PTCHD3-201ENST00000438700 SNW1Q13573 536 aaKnown RBP16.1■□□□□ 0.17
PTCHD3-201ENST00000438700 STK11IPQ8N1F8 1099 aa16.1■□□□□ 0.17
PTCHD3-201ENST00000438700 FSIP1Q8NA03 581 aa16.1■□□□□ 0.17
PTCHD3-201ENST00000438700 TBC1D16Q8TBP0 767 aa16.1■□□□□ 0.17
PTCHD3-201ENST00000438700 ERCC4Q92889 916 aaPredicted RBP16.1■□□□□ 0.17
PTCHD3-201ENST00000438700 MYL10Q9BUA6 226 aa16.1■□□□□ 0.17
PTCHD3-201ENST00000438700 CLIC4Q9Y696 253 aa16.1■□□□□ 0.17
PTCHD3-201ENST00000438700 WDR19Q8NEZ3 1342 aa16.1■□□□□ 0.17
PTCHD3-201ENST00000438700 U2AF2P26368 475 aaKnown RBP eCLIP16.1■□□□□ 0.17
PTCHD3-201ENST00000438700 PDE6BP35913 854 aa16.1■□□□□ 0.17
PTCHD3-201ENST00000438700 METAP2P50579 478 aaKnown RBP eCLIP16.1■□□□□ 0.17
PTCHD3-201ENST00000438700 TMC4Q7Z404 712 aa16.1■□□□□ 0.17
PTCHD3-201ENST00000438700 WDR66Q8TBY9 1149 aa16.1■□□□□ 0.17
PTCHD3-201ENST00000438700 STK32BQ9NY57 414 aa16.1■□□□□ 0.17
PTCHD3-201ENST00000438700 TACC3Q9Y6A5 838 aa16.1■□□□□ 0.17
PTCHD3-201ENST00000438700 KIF28PB7ZC32 967 aa16.09■□□□□ 0.17
PTCHD3-201ENST00000438700 SH2B2O14492 632 aaPredicted RBP16.09■□□□□ 0.17
PTCHD3-201ENST00000438700 DZIP1Q86YF9 867 aaKnown RBP16.09■□□□□ 0.17
PTCHD3-201ENST00000438700 SP8Q8IXZ3 490 aa16.09■□□□□ 0.17
PTCHD3-201ENST00000438700 PCDHA7Q9UN72 937 aa16.09■□□□□ 0.17
PTCHD3-201ENST00000438700 ATP6V0A2Q9Y487 856 aa16.09■□□□□ 0.17
PTCHD3-201ENST00000438700 C6orf229H3BNL8 230 aa16.09■□□□□ 0.17
PTCHD3-201ENST00000438700 KINO60870 393 aaKnown RBP16.09■□□□□ 0.17
PTCHD3-201ENST00000438700 AKNAD1Q5T1N1 836 aa16.09■□□□□ 0.17
PTCHD3-201ENST00000438700 SPTY2D1Q68D10 685 aaPredicted RBP16.09■□□□□ 0.17
PTCHD3-201ENST00000438700 ATL3Q6DD88 541 aa16.09■□□□□ 0.17
PTCHD3-201ENST00000438700 APOA5Q6Q788 366 aa16.09■□□□□ 0.17
PTCHD3-201ENST00000438700 NFXL1Q6ZNB6 911 aa16.09■□□□□ 0.17
PTCHD3-201ENST00000438700 PHKBQ93100 1093 aa16.09■□□□□ 0.17
PTCHD3-201ENST00000438700 CD209Q9NNX6 404 aa16.09■□□□□ 0.17
PTCHD3-201ENST00000438700 AATFQ9NY61 560 aaKnown RBP eCLIP16.09■□□□□ 0.17
PTCHD3-201ENST00000438700 CDC27P30260 824 aa16.08■□□□□ 0.17
PTCHD3-201ENST00000438700 OLFM4Q6UX06 510 aa16.08■□□□□ 0.17
PTCHD3-201ENST00000438700 KIAA1551Q9HCM1 1747 aa16.08■□□□□ 0.17
PTCHD3-201ENST00000438700 A0A1B0GVL5 298 aa16.08■□□□□ 0.16
PTCHD3-201ENST00000438700 LDHBP07195 334 aaKnown RBP16.08■□□□□ 0.16
PTCHD3-201ENST00000438700 FAM160A1Q05DH4 1040 aa16.08■□□□□ 0.16
PTCHD3-201ENST00000438700 STK38Q15208 465 aa16.08■□□□□ 0.16
PTCHD3-201ENST00000438700 SF3A1Q15459 793 aaKnown RBP16.08■□□□□ 0.16
PTCHD3-201ENST00000438700 FBXW7Q969H0 707 aa16.08■□□□□ 0.16
PTCHD3-201ENST00000438700 RTEL1Q9NZ71 1219 aa16.08■□□□□ 0.16
PTCHD3-201ENST00000438700 PPARAQ07869 468 aa16.07■□□□□ 0.16
PTCHD3-201ENST00000438700 GRIK5Q16478 980 aa16.07■□□□□ 0.16
PTCHD3-201ENST00000438700 TMEM67Q5HYA8 995 aa16.07■□□□□ 0.16
PTCHD3-201ENST00000438700 RRP12Q5JTH9 1297 aaKnown RBP16.07■□□□□ 0.16
PTCHD3-201ENST00000438700 MYSM1Q5VVJ2 828 aa16.07■□□□□ 0.16
PTCHD3-201ENST00000438700 MFSD6Q6ZSS7 791 aa16.07■□□□□ 0.16
PTCHD3-201ENST00000438700 C11orf57Q6ZUT1 292 aaPredicted RBP16.07■□□□□ 0.16
PTCHD3-201ENST00000438700 PDCL2Q8N4E4 241 aa16.07■□□□□ 0.16
PTCHD3-201ENST00000438700 LINC00301Q8NCQ3 95 aa16.07■□□□□ 0.16
PTCHD3-201ENST00000438700 STAG1Q8WVM7 1258 aa16.07■□□□□ 0.16
PTCHD3-201ENST00000438700 TOMM22Q9NS69 142 aa16.07■□□□□ 0.16
PTCHD3-201ENST00000438700 QSER1Q2KHR3 1735 aa16.07■□□□□ 0.16
PTCHD3-201ENST00000438700 MINDY4BA8MYZ0 360 aa16.07■□□□□ 0.16
PTCHD3-201ENST00000438700 IL1R1P14778 569 aa16.07■□□□□ 0.16
PTCHD3-201ENST00000438700 PTGS1P23219 599 aa16.07■□□□□ 0.16
PTCHD3-201ENST00000438700 ENGASEQ8NFI3 743 aa16.07■□□□□ 0.16
PTCHD3-201ENST00000438700 IGDCC4Q8TDY8 1250 aa16.07■□□□□ 0.16
PTCHD3-201ENST00000438700 MASTLQ96GX5 879 aa16.07■□□□□ 0.16
PTCHD3-201ENST00000438700 TRIM5Q9C035 493 aa16.07■□□□□ 0.16
PTCHD3-201ENST00000438700 CNNM2Q9H8M5 875 aa16.07■□□□□ 0.16
PTCHD3-201ENST00000438700 ZSWIM5Q9P217 1185 aa16.07■□□□□ 0.16
PTCHD3-201ENST00000438700 UBE2Q2LH0YL09 131 aa16.06■□□□□ 0.16
PTCHD3-201ENST00000438700 ALDH1B1P30837 517 aa16.06■□□□□ 0.16
PTCHD3-201ENST00000438700 MRPS27Q92552 414 aaKnown RBP16.06■□□□□ 0.16
PTCHD3-201ENST00000438700 ALG1Q9BT22 464 aa16.06■□□□□ 0.16
PTCHD3-201ENST00000438700 LY9Q9HBG7 655 aa16.06■□□□□ 0.16
PTCHD3-201ENST00000438700 DUOX1Q9NRD9 1551 aa16.06■□□□□ 0.16
PTCHD3-201ENST00000438700 SMIM22K7EJ46 135 aa16.06■□□□□ 0.16
PTCHD3-201ENST00000438700 ZBTB43O43298 467 aa16.06■□□□□ 0.16
PTCHD3-201ENST00000438700 KIF23Q02241 960 aaPredicted RBP16.06■□□□□ 0.16
PTCHD3-201ENST00000438700 LRMPQ12912 555 aa16.06■□□□□ 0.16
PTCHD3-201ENST00000438700 NAA30Q147X3 362 aaPredicted RBP16.06■□□□□ 0.16
PTCHD3-201ENST00000438700 ZNF622Q969S3 477 aaKnown RBP eCLIP16.06■□□□□ 0.16
PTCHD3-201ENST00000438700 ZKSCAN3Q9BRR0 538 aa16.06■□□□□ 0.16
PTCHD3-201ENST00000438700 KRT23Q9C075 422 aa16.06■□□□□ 0.16
PTCHD3-201ENST00000438700 IFIT3O14879 490 aaKnown RBP16.05■□□□□ 0.16
PTCHD3-201ENST00000438700 NDUFA8P51970 172 aa16.05■□□□□ 0.16
PTCHD3-201ENST00000438700 UTP14CQ5TAP6 766 aaKnown RBP16.05■□□□□ 0.16
PTCHD3-201ENST00000438700 ADALQ6DHV7 355 aa16.05■□□□□ 0.16
PTCHD3-201ENST00000438700 TMED8Q6PL24 325 aaPredicted RBP16.05■□□□□ 0.16
PTCHD3-201ENST00000438700 SYNE3Q6ZMZ3 975 aa16.05■□□□□ 0.16
PTCHD3-201ENST00000438700 DEFB132Q7Z7B7 95 aa16.05■□□□□ 0.16
PTCHD3-201ENST00000438700 DRC7Q8IY82 874 aa16.05■□□□□ 0.16
PTCHD3-201ENST00000438700 TMEM87BQ96K49 555 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms