RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 LAMB1P07942 1786 aa11.56□□□□□ -0.56
CUBN-204ENST00000438254 ZC3H4Q9UPT8 1303 aaKnown RBP11.56□□□□□ -0.56
CUBN-204ENST00000438254 BAZ2AQ9UIF9 1905 aaKnown RBP11.55□□□□□ -0.56
CUBN-204ENST00000438254 SHTN1A0MZ66 631 aa11.55□□□□□ -0.56
CUBN-204ENST00000438254 GMPSP49915 693 aaPredicted RBP11.55□□□□□ -0.56
CUBN-204ENST00000438254 RABEP1Q15276 862 aa11.55□□□□□ -0.56
CUBN-204ENST00000438254 GPR162Q16538 588 aa11.55□□□□□ -0.56
CUBN-204ENST00000438254 RNF20Q5VTR2 975 aa11.55□□□□□ -0.56
CUBN-204ENST00000438254 C9orf131Q5VYM1 1079 aa11.55□□□□□ -0.56
CUBN-204ENST00000438254 CTR9Q6PD62 1173 aa11.55□□□□□ -0.56
CUBN-204ENST00000438254 GPC2Q8N158 579 aa11.55□□□□□ -0.56
CUBN-204ENST00000438254 PRMT6Q96LA8 375 aaPredicted RBP11.55□□□□□ -0.56
CUBN-204ENST00000438254 NOL10Q9BSC4 688 aaKnown RBP11.55□□□□□ -0.56
CUBN-204ENST00000438254 IDI2Q9BXS1 227 aa11.55□□□□□ -0.56
CUBN-204ENST00000438254 NAPBQ9H115 298 aa11.55□□□□□ -0.56
CUBN-204ENST00000438254 DDX4Q9NQI0 724 aaKnown RBP11.55□□□□□ -0.56
CUBN-204ENST00000438254 RNF181Q9P0P0 153 aa11.55□□□□□ -0.56
CUBN-204ENST00000438254 UTRNP46939 3433 aa11.55□□□□□ -0.56
CUBN-204ENST00000438254 FLT1P17948 1338 aa11.55□□□□□ -0.56
CUBN-204ENST00000438254 ROBO3Q96MS0 1386 aa11.54□□□□□ -0.56
CUBN-204ENST00000438254 SMIM22K7EJ46 135 aa11.54□□□□□ -0.56
CUBN-204ENST00000438254 APPP05067 770 aa11.54□□□□□ -0.56
CUBN-204ENST00000438254 FGRP09769 529 aa11.54□□□□□ -0.56
CUBN-204ENST00000438254 ZKSCAN1P17029 563 aaPredicted RBP11.54□□□□□ -0.56
CUBN-204ENST00000438254 IMMTQ16891 758 aaKnown RBP11.54□□□□□ -0.56
CUBN-204ENST00000438254 TBC1D10CQ8IV04 446 aa11.54□□□□□ -0.56
CUBN-204ENST00000438254 TEX11Q8IYF3 940 aa11.54□□□□□ -0.56
CUBN-204ENST00000438254 IL27Q8NEV9 243 aa11.54□□□□□ -0.56
CUBN-204ENST00000438254 TGFBRAP1Q8WUH2 860 aa11.54□□□□□ -0.56
CUBN-204ENST00000438254 TTC14Q96N46 770 aa11.54□□□□□ -0.56
CUBN-204ENST00000438254 NACAP1Q9BZK3 213 aa11.54□□□□□ -0.56
CUBN-204ENST00000438254 USP40Q9NVE5 1235 aa11.54□□□□□ -0.56
CUBN-204ENST00000438254 HDAC9Q9UKV0 1011 aa11.54□□□□□ -0.56
CUBN-204ENST00000438254 COL2A1P02458 1487 aaPredicted RBP11.53□□□□□ -0.56
CUBN-204ENST00000438254 USP17L12C9JPN9 530 aa11.53□□□□□ -0.56
CUBN-204ENST00000438254 USP17L21D6R901 530 aa11.53□□□□□ -0.56
CUBN-204ENST00000438254 E7EWF7 191 aa11.53□□□□□ -0.56
CUBN-204ENST00000438254 ZNF213O14771 459 aa11.53□□□□□ -0.56
CUBN-204ENST00000438254 EGFRP00533 1210 aa11.53□□□□□ -0.56
CUBN-204ENST00000438254 TDO2P48775 406 aa11.53□□□□□ -0.56
CUBN-204ENST00000438254 HAND2P61296 217 aa11.53□□□□□ -0.56
CUBN-204ENST00000438254 PPARAQ07869 468 aa11.53□□□□□ -0.56
CUBN-204ENST00000438254 NFIAQ12857 509 aa11.53□□□□□ -0.56
CUBN-204ENST00000438254 KRT32Q14532 448 aa11.53□□□□□ -0.56
CUBN-204ENST00000438254 C12orf60Q5U649 245 aa11.53□□□□□ -0.56
CUBN-204ENST00000438254 OGFOD1Q8N543 542 aa11.53□□□□□ -0.56
CUBN-204ENST00000438254 FBXO22Q8NEZ5 403 aa11.53□□□□□ -0.56
CUBN-204ENST00000438254 NKX2-3Q8TAU0 364 aa11.53□□□□□ -0.56
CUBN-204ENST00000438254 STAG1Q8WVM7 1258 aa11.53□□□□□ -0.56
CUBN-204ENST00000438254 MYOZ2Q9NPC6 264 aa11.53□□□□□ -0.56
CUBN-204ENST00000438254 GPRC5DQ9NZD1 345 aa11.53□□□□□ -0.56
CUBN-204ENST00000438254 ARPP21Q9UBL0 812 aaPredicted RBP11.53□□□□□ -0.56
CUBN-204ENST00000438254 FAM198AQ9UFP1 575 aa11.53□□□□□ -0.56
CUBN-204ENST00000438254 SIPA1L1O43166 1804 aa11.53□□□□□ -0.56
CUBN-204ENST00000438254 CYP2D7A0A087X1C5 515 aa11.52□□□□□ -0.57
CUBN-204ENST00000438254 WNT10BO00744 389 aa11.52□□□□□ -0.57
CUBN-204ENST00000438254 CD2BP2O95400 341 aaKnown RBP11.52□□□□□ -0.57
CUBN-204ENST00000438254 USP5P45974 858 aa11.52□□□□□ -0.57
CUBN-204ENST00000438254 EXOSC10Q01780 885 aaKnown RBP11.52□□□□□ -0.57
CUBN-204ENST00000438254 DLGAP5Q15398 846 aa11.52□□□□□ -0.57
CUBN-204ENST00000438254 FKBP1CQ5VVH2 108 aa11.52□□□□□ -0.57
CUBN-204ENST00000438254 MAPKAPK5Q8IW41 473 aa11.52□□□□□ -0.57
CUBN-204ENST00000438254 SNX21Q969T3 373 aa11.52□□□□□ -0.57
CUBN-204ENST00000438254 JAKMIP1Q96N16 626 aaKnown RBP11.52□□□□□ -0.57
CUBN-204ENST00000438254 OSBPL5Q9H0X9 879 aaPredicted RBP11.52□□□□□ -0.57
CUBN-204ENST00000438254 ALDH8A1Q9H2A2 487 aaPredicted RBP11.52□□□□□ -0.57
CUBN-204ENST00000438254 TDRD3Q9H7E2 651 aaKnown RBP11.52□□□□□ -0.57
CUBN-204ENST00000438254 CNOT7Q9UIV1 285 aaKnown RBP11.52□□□□□ -0.57
CUBN-204ENST00000438254 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.52□□□□□ -0.57
CUBN-204ENST00000438254 GJA3Q9Y6H8 435 aa11.52□□□□□ -0.57
CUBN-204ENST00000438254 ATRNL1Q5VV63 1379 aa11.52□□□□□ -0.57
CUBN-204ENST00000438254 MYH1P12882 1939 aa11.51□□□□□ -0.57
CUBN-204ENST00000438254 ENTPD3O75355 529 aa11.51□□□□□ -0.57
CUBN-204ENST00000438254 DDNO94850 711 aaPredicted RBP11.51□□□□□ -0.57
CUBN-204ENST00000438254 CYP2D6P10635 497 aa11.51□□□□□ -0.57
CUBN-204ENST00000438254 GABPAQ06546 454 aa11.51□□□□□ -0.57
CUBN-204ENST00000438254 AKNAD1Q5T1N1 836 aa11.51□□□□□ -0.57
CUBN-204ENST00000438254 RUFY3Q7L099 469 aa11.51□□□□□ -0.57
CUBN-204ENST00000438254 ZFPM1Q8IX07 1006 aa11.51□□□□□ -0.57
CUBN-204ENST00000438254 MB21D2Q8IYB1 491 aaPredicted RBP11.51□□□□□ -0.57
CUBN-204ENST00000438254 FBXL16Q8N461 479 aa11.51□□□□□ -0.57
CUBN-204ENST00000438254 NEK1Q96PY6 1258 aa11.51□□□□□ -0.57
CUBN-204ENST00000438254 UPF3BQ9BZI7 483 aaKnown RBP11.51□□□□□ -0.57
CUBN-204ENST00000438254 MCM9Q9NXL9 1143 aa11.51□□□□□ -0.57
CUBN-204ENST00000438254 ZNF70Q9UC06 446 aaPredicted RBP11.51□□□□□ -0.57
CUBN-204ENST00000438254 PGAP2Q9UHJ9 254 aa11.51□□□□□ -0.57
CUBN-204ENST00000438254 NEDD4P46934 1319 aa11.51□□□□□ -0.57
CUBN-204ENST00000438254 CNTNAP1P78357 1384 aa11.51□□□□□ -0.57
CUBN-204ENST00000438254 PCP11498 1178 aaKnown RBP11.5□□□□□ -0.57
CUBN-204ENST00000438254 CPA1P15085 419 aa11.5□□□□□ -0.57
CUBN-204ENST00000438254 CASTP20810 708 aaKnown RBP11.5□□□□□ -0.57
CUBN-204ENST00000438254 RPS6KB1P23443 525 aa11.5□□□□□ -0.57
CUBN-204ENST00000438254 PSMA5P28066 241 aa11.5□□□□□ -0.57
CUBN-204ENST00000438254 PLCD1P51178 756 aa11.5□□□□□ -0.57
CUBN-204ENST00000438254 RBM5P52756 815 aaKnown RBP eCLIP11.5□□□□□ -0.57
CUBN-204ENST00000438254 CACNB3P54284 484 aa11.5□□□□□ -0.57
CUBN-204ENST00000438254 CTDSPL2Q05D32 466 aa11.5□□□□□ -0.57
CUBN-204ENST00000438254 NBPF9Q3BBW0 867 aa11.5□□□□□ -0.57
CUBN-204ENST00000438254 SH3BP5LQ7L8J4 393 aa11.5□□□□□ -0.57
CUBN-204ENST00000438254 METTL16Q86W50 562 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms