RNA–Protein interactions for RNA: ENST00000436976.1

HMGN1P19-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 19, humanhuman

BASIC

Gene HMGN1P19, Length 333 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P19-201ENST00000436976 BDP1A6H8Y1 2624 aa20.55■□□□□ 0.88
HMGN1P19-201ENST00000436976 NBPF7P0C2Y1 421 aaPredicted RBP20.55■□□□□ 0.88
HMGN1P19-201ENST00000436976 XRCC5P13010 732 aaKnown RBP20.55■□□□□ 0.88
HMGN1P19-201ENST00000436976 FOSL2P15408 326 aa20.55■□□□□ 0.88
HMGN1P19-201ENST00000436976 PLA2G5P39877 138 aa20.55■□□□□ 0.88
HMGN1P19-201ENST00000436976 USP38Q8NB14 1042 aa20.55■□□□□ 0.88
HMGN1P19-201ENST00000436976 KLHDC4Q8TBB5 520 aa20.55■□□□□ 0.88
HMGN1P19-201ENST00000436976 DDX4Q9NQI0 724 aaKnown RBP20.55■□□□□ 0.88
HMGN1P19-201ENST00000436976 HMGCS2P54868 508 aa20.54■□□□□ 0.88
HMGN1P19-201ENST00000436976 SPP2Q13103 211 aa20.54■□□□□ 0.88
HMGN1P19-201ENST00000436976 CCL14Q16627 93 aa20.54■□□□□ 0.88
HMGN1P19-201ENST00000436976 RABL6Q3YEC7 729 aaPredicted RBP20.54■□□□□ 0.88
HMGN1P19-201ENST00000436976 TJAP1Q5JTD0 557 aa20.54■□□□□ 0.88
HMGN1P19-201ENST00000436976 ZSCAN29Q8IWY8 852 aaPredicted RBP20.54■□□□□ 0.88
HMGN1P19-201ENST00000436976 NUDT12Q9BQG2 462 aa20.54■□□□□ 0.88
HMGN1P19-201ENST00000436976 SENP6Q9GZR1 1112 aaPredicted RBP20.54■□□□□ 0.88
HMGN1P19-201ENST00000436976 BICC1Q9H694 974 aaKnown RBP20.54■□□□□ 0.88
HMGN1P19-201ENST00000436976 ALDH1L1O75891 902 aa20.53■□□□□ 0.88
HMGN1P19-201ENST00000436976 IFIT1P09914 478 aaKnown RBP20.53■□□□□ 0.88
HMGN1P19-201ENST00000436976 ZEB1P37275 1124 aaPredicted RBP20.53■□□□□ 0.88
HMGN1P19-201ENST00000436976 PUM3Q15397 648 aaKnown RBP20.53■□□□□ 0.88
HMGN1P19-201ENST00000436976 WWC1Q8IX03 1113 aa20.53■□□□□ 0.88
HMGN1P19-201ENST00000436976 ANKRD44Q8N8A2 993 aa20.53■□□□□ 0.88
HMGN1P19-201ENST00000436976 USP6NLQ92738 828 aa20.53■□□□□ 0.88
HMGN1P19-201ENST00000436976 TXNRD2Q9NNW7 524 aa20.53■□□□□ 0.88
HMGN1P19-201ENST00000436976 SIPA1L1O43166 1804 aa20.53■□□□□ 0.88
HMGN1P19-201ENST00000436976 FAM196BA6NMK8 535 aa20.52■□□□□ 0.88
HMGN1P19-201ENST00000436976 LDHBP07195 334 aaKnown RBP20.52■□□□□ 0.88
HMGN1P19-201ENST00000436976 ZKSCAN1P17029 563 aaPredicted RBP20.52■□□□□ 0.88
HMGN1P19-201ENST00000436976 ATN1P54259 1190 aaPredicted RBP20.52■□□□□ 0.88
HMGN1P19-201ENST00000436976 FANCIQ9NVI1 1328 aa20.52■□□□□ 0.87
HMGN1P19-201ENST00000436976 SMAD3P84022 425 aaKnown RBP20.51■□□□□ 0.87
HMGN1P19-201ENST00000436976 ZNF280CQ8ND82 737 aa20.51■□□□□ 0.87
HMGN1P19-201ENST00000436976 SOCS4Q8WXH5 440 aa20.51■□□□□ 0.87
HMGN1P19-201ENST00000436976 UTYO14607 1347 aa20.51■□□□□ 0.87
HMGN1P19-201ENST00000436976 GAKO14976 1311 aa20.51■□□□□ 0.87
HMGN1P19-201ENST00000436976 PABPC4Q13310 644 aaKnown RBP eCLIP20.5■□□□□ 0.87
HMGN1P19-201ENST00000436976 RRP1BQ14684 758 aaKnown RBP20.5■□□□□ 0.87
HMGN1P19-201ENST00000436976 CCDC27Q2M243 656 aa20.5■□□□□ 0.87
HMGN1P19-201ENST00000436976 REV3LO60673 3130 aa20.49■□□□□ 0.87
HMGN1P19-201ENST00000436976 TCF20Q9UGU0 1960 aaKnown RBP20.49■□□□□ 0.87
HMGN1P19-201ENST00000436976 RTP1P59025 263 aa20.49■□□□□ 0.87
HMGN1P19-201ENST00000436976 SH3D19Q5HYK7 790 aa20.49■□□□□ 0.87
HMGN1P19-201ENST00000436976 SLC4A10Q6U841 1118 aa20.49■□□□□ 0.87
HMGN1P19-201ENST00000436976 TRMT44Q8IYL2 757 aaKnown RBP20.49■□□□□ 0.87
HMGN1P19-201ENST00000436976 SRCIN1Q9C0H9 1055 aa20.49■□□□□ 0.87
HMGN1P19-201ENST00000436976 SALL1Q9NSC2 1324 aa20.49■□□□□ 0.87
HMGN1P19-201ENST00000436976 TBC1D12O60347 775 aa20.48■□□□□ 0.87
HMGN1P19-201ENST00000436976 PICALMQ13492 652 aa20.48■□□□□ 0.87
HMGN1P19-201ENST00000436976 MORN1Q5T089 497 aa20.48■□□□□ 0.87
HMGN1P19-201ENST00000436976 LPIN2Q92539 896 aa20.48■□□□□ 0.87
HMGN1P19-201ENST00000436976 FAM122AQ96E09 287 aa20.48■□□□□ 0.87
HMGN1P19-201ENST00000436976 P2RX7Q99572 595 aaKnown RBP20.48■□□□□ 0.87
HMGN1P19-201ENST00000436976 PORCNQ9H237 461 aa20.48■□□□□ 0.87
HMGN1P19-201ENST00000436976 PRKAG2Q9UGJ0 569 aa20.48■□□□□ 0.87
HMGN1P19-201ENST00000436976 IL16Q14005 1332 aa20.48■□□□□ 0.87
HMGN1P19-201ENST00000436976 TMEM265A0A087WTH1 108 aa20.47■□□□□ 0.87
HMGN1P19-201ENST00000436976 SLC5A1P13866 664 aa20.47■□□□□ 0.87
HMGN1P19-201ENST00000436976 Q3C1V9 767 aa20.47■□□□□ 0.87
HMGN1P19-201ENST00000436976 OSBPL5Q9H0X9 879 aaPredicted RBP20.47■□□□□ 0.87
HMGN1P19-201ENST00000436976 XIRP2A4UGR9 3374 aa20.47■□□□□ 0.87
HMGN1P19-201ENST00000436976 CDK5RAP2Q96SN8 1893 aa20.47■□□□□ 0.87
HMGN1P19-201ENST00000436976 HOXD11P31277 338 aaPredicted RBP20.46■□□□□ 0.87
HMGN1P19-201ENST00000436976 RGS2P41220 211 aa20.46■□□□□ 0.87
HMGN1P19-201ENST00000436976 EXOSC9Q06265 439 aaKnown RBP20.46■□□□□ 0.87
HMGN1P19-201ENST00000436976 DDX10Q13206 875 aaKnown RBP20.46■□□□□ 0.87
HMGN1P19-201ENST00000436976 POTEEQ6S8J3 1075 aa20.46■□□□□ 0.87
HMGN1P19-201ENST00000436976 GPR142Q7Z601 462 aa20.46■□□□□ 0.87
HMGN1P19-201ENST00000436976 GPRC5AQ8NFJ5 357 aa20.46■□□□□ 0.87
HMGN1P19-201ENST00000436976 BADQ92934 168 aa20.46■□□□□ 0.87
HMGN1P19-201ENST00000436976 RBPJLQ9UBG7 517 aa20.46■□□□□ 0.87
HMGN1P19-201ENST00000436976 HERVK_113P62684 666 aa20.45■□□□□ 0.86
HMGN1P19-201ENST00000436976 IRX3P78415 501 aaPredicted RBP20.45■□□□□ 0.86
HMGN1P19-201ENST00000436976 PDE3AQ14432 1141 aa20.45■□□□□ 0.86
HMGN1P19-201ENST00000436976 APBA2Q99767 749 aa20.45■□□□□ 0.86
HMGN1P19-201ENST00000436976 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.45■□□□□ 0.86
HMGN1P19-201ENST00000436976 FLRT1Q9NZU1 646 aa20.45■□□□□ 0.86
HMGN1P19-201ENST00000436976 ATP11BQ9Y2G3 1177 aa20.45■□□□□ 0.86
HMGN1P19-201ENST00000436976 PLXNA1Q9UIW2 1896 aa20.45■□□□□ 0.86
HMGN1P19-201ENST00000436976 SMCHD1A6NHR9 2005 aa20.44■□□□□ 0.86
HMGN1P19-201ENST00000436976 MAPK4P31152 587 aa20.44■□□□□ 0.86
HMGN1P19-201ENST00000436976 HOXA7P31268 230 aaPredicted RBP20.44■□□□□ 0.86
HMGN1P19-201ENST00000436976 CAP2P40123 477 aa20.44■□□□□ 0.86
HMGN1P19-201ENST00000436976 GRIN2CQ14957 1233 aa20.44■□□□□ 0.86
HMGN1P19-201ENST00000436976 TBC1D2Q9BYX2 928 aa20.44■□□□□ 0.86
HMGN1P19-201ENST00000436976 USP17L5A8MUK1 530 aa20.43■□□□□ 0.86
HMGN1P19-201ENST00000436976 DNM1LO00429 736 aa20.43■□□□□ 0.86
HMGN1P19-201ENST00000436976 BTDP43251 543 aa20.43■□□□□ 0.86
HMGN1P19-201ENST00000436976 RFX5P48382 616 aaPredicted RBP20.43■□□□□ 0.86
HMGN1P19-201ENST00000436976 RHBDL3P58872 404 aa20.43■□□□□ 0.86
HMGN1P19-201ENST00000436976 ERVK-9P63128 1117 aa20.43■□□□□ 0.86
HMGN1P19-201ENST00000436976 ERVK-24P63145 666 aa20.43■□□□□ 0.86
HMGN1P19-201ENST00000436976 LPAR1Q92633 364 aa20.43■□□□□ 0.86
HMGN1P19-201ENST00000436976 DDX20Q9UHI6 824 aaKnown RBP20.43■□□□□ 0.86
HMGN1P19-201ENST00000436976 CHD9Q3L8U1 2897 aa20.42■□□□□ 0.86
HMGN1P19-201ENST00000436976 EYA2O00167 538 aa20.42■□□□□ 0.86
HMGN1P19-201ENST00000436976 PHKA1P46020 1223 aa20.42■□□□□ 0.86
HMGN1P19-201ENST00000436976 MAP3K12Q12852 859 aa20.42■□□□□ 0.86
HMGN1P19-201ENST00000436976 MTMR2Q13614 643 aa20.42■□□□□ 0.86
HMGN1P19-201ENST00000436976 ATG9AQ7Z3C6 839 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms