RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 AOC3Q16853 763 aa24.7■■□□□ 1.54
PTPRF-207ENST00000436724 C12orf60Q5U649 245 aa24.7■■□□□ 1.54
PTPRF-207ENST00000436724 TEX11Q8IYF3 940 aa24.7■■□□□ 1.54
PTPRF-207ENST00000436724 CHMP4CQ96CF2 233 aa24.7■■□□□ 1.54
PTPRF-207ENST00000436724 DYNLL2Q96FJ2 89 aa24.7■■□□□ 1.54
PTPRF-207ENST00000436724 FAM217BQ9NTX9 383 aaPredicted RBP24.7■■□□□ 1.54
PTPRF-207ENST00000436724 SNED1Q8TER0 1413 aa24.69■■□□□ 1.54
PTPRF-207ENST00000436724 GOLGA8AA7E2F4 631 aa24.69■■□□□ 1.54
PTPRF-207ENST00000436724 SCNN1DP51172 638 aa24.69■■□□□ 1.54
PTPRF-207ENST00000436724 SEC23AQ15436 765 aa24.69■■□□□ 1.54
PTPRF-207ENST00000436724 FAM47AQ5JRC9 791 aa24.69■■□□□ 1.54
PTPRF-207ENST00000436724 PODNQ7Z5L7 613 aa24.69■■□□□ 1.54
PTPRF-207ENST00000436724 SLF2Q8IX21 1173 aa24.69■■□□□ 1.54
PTPRF-207ENST00000436724 ENAHQ8N8S7 591 aaPredicted RBP24.69■■□□□ 1.54
PTPRF-207ENST00000436724 ZSCAN10Q96SZ4 725 aaPredicted RBP24.69■■□□□ 1.54
PTPRF-207ENST00000436724 ORC3Q9UBD5 711 aaPredicted RBP24.69■■□□□ 1.54
PTPRF-207ENST00000436724 SCN9AQ15858 1988 aa24.68■■□□□ 1.54
PTPRF-207ENST00000436724 ECE2O60344 883 aa24.68■■□□□ 1.54
PTPRF-207ENST00000436724 NMT2O60551 498 aa24.68■■□□□ 1.54
PTPRF-207ENST00000436724 PCP11498 1178 aaKnown RBP24.68■■□□□ 1.54
PTPRF-207ENST00000436724 DPEP1P16444 411 aa24.68■■□□□ 1.54
PTPRF-207ENST00000436724 KCNA3P22001 575 aa24.68■■□□□ 1.54
PTPRF-207ENST00000436724 PLCD1P51178 756 aa24.68■■□□□ 1.54
PTPRF-207ENST00000436724 PHKBQ93100 1093 aa24.68■■□□□ 1.54
PTPRF-207ENST00000436724 GJB4Q9NTQ9 266 aa24.68■■□□□ 1.54
PTPRF-207ENST00000436724 KIF3AQ9Y496 699 aa24.68■■□□□ 1.54
PTPRF-207ENST00000436724 NAV1Q8NEY1 1877 aa24.68■■□□□ 1.54
PTPRF-207ENST00000436724 ORC4O43929 436 aa24.67■■□□□ 1.54
PTPRF-207ENST00000436724 TPRNQ4KMQ1 711 aa24.67■■□□□ 1.54
PTPRF-207ENST00000436724 OTUD7BQ6GQQ9 843 aa24.67■■□□□ 1.54
PTPRF-207ENST00000436724 GAS2L3Q86XJ1 694 aa24.67■■□□□ 1.54
PTPRF-207ENST00000436724 MTA3Q9BTC8 594 aa24.67■■□□□ 1.54
PTPRF-207ENST00000436724 GRPEL1Q9HAV7 217 aa24.67■■□□□ 1.54
PTPRF-207ENST00000436724 ISY1Q9ULR0 285 aaKnown RBP24.67■■□□□ 1.54
PTPRF-207ENST00000436724 SLC3A2P08195 630 aaKnown RBP24.67■■□□□ 1.54
PTPRF-207ENST00000436724 RESTQ13127 1097 aa24.67■■□□□ 1.54
PTPRF-207ENST00000436724 CCDC125Q86Z20 511 aa24.67■■□□□ 1.54
PTPRF-207ENST00000436724 TTLL6Q8N841 843 aa24.67■■□□□ 1.54
PTPRF-207ENST00000436724 ATF5Q9Y2D1 282 aaPredicted RBP24.67■■□□□ 1.54
PTPRF-207ENST00000436724 FLT1P17948 1338 aa24.66■■□□□ 1.54
PTPRF-207ENST00000436724 PDE4BQ07343 736 aa24.66■■□□□ 1.54
PTPRF-207ENST00000436724 NTRK3Q16288 839 aa24.66■■□□□ 1.54
PTPRF-207ENST00000436724 CAVIN1Q6NZI2 390 aaKnown RBP24.66■■□□□ 1.54
PTPRF-207ENST00000436724 SYNE3Q6ZMZ3 975 aa24.66■■□□□ 1.54
PTPRF-207ENST00000436724 SUGT1Q9Y2Z0 365 aa24.66■■□□□ 1.54
PTPRF-207ENST00000436724 ADAMTSL1Q8N6G6 1762 aa24.66■■□□□ 1.54
PTPRF-207ENST00000436724 IQCA1Q86XH1 822 aa24.66■■□□□ 1.54
PTPRF-207ENST00000436724 ZNF654Q8IZM8 581 aa24.66■■□□□ 1.54
PTPRF-207ENST00000436724 TAOK2Q9UL54 1235 aa24.66■■□□□ 1.54
PTPRF-207ENST00000436724 PLCG2P16885 1265 aa24.65■■□□□ 1.54
PTPRF-207ENST00000436724 CERS3Q8IU89 383 aa24.65■■□□□ 1.54
PTPRF-207ENST00000436724 TMTC2Q8N394 836 aa24.65■■□□□ 1.54
PTPRF-207ENST00000436724 TMEM87AQ8NBN3 555 aa24.65■■□□□ 1.54
PTPRF-207ENST00000436724 SLC44A5Q8NCS7 719 aa24.65■■□□□ 1.54
PTPRF-207ENST00000436724 NUP133Q8WUM0 1156 aa24.65■■□□□ 1.54
PTPRF-207ENST00000436724 AIFM3Q96NN9 605 aa24.65■■□□□ 1.54
PTPRF-207ENST00000436724 RBM27Q9P2N5 1060 aaKnown RBP24.65■■□□□ 1.54
PTPRF-207ENST00000436724 DLEC1Q9Y238 1755 aa24.65■■□□□ 1.54
PTPRF-207ENST00000436724 UBE2Q2LH0YL09 131 aa24.64■■□□□ 1.54
PTPRF-207ENST00000436724 POLR3DP05423 398 aaPredicted RBP24.64■■□□□ 1.54
PTPRF-207ENST00000436724 KIAA0825Q8IV33 1275 aa24.64■■□□□ 1.53
PTPRF-207ENST00000436724 CMTR1Q8N1G2 835 aaKnown RBP24.64■■□□□ 1.53
PTPRF-207ENST00000436724 TFIP11Q9UBB9 837 aaKnown RBP24.64■■□□□ 1.53
PTPRF-207ENST00000436724 UTRNP46939 3433 aa24.64■■□□□ 1.53
PTPRF-207ENST00000436724 KIAA2012Q0VF49 1180 aa24.63■■□□□ 1.53
PTPRF-207ENST00000436724 IFIT1BQ5T764 474 aaKnown RBP24.63■■□□□ 1.53
PTPRF-207ENST00000436724 AMOTL1Q8IY63 956 aa24.63■■□□□ 1.53
PTPRF-207ENST00000436724 TSPY2A6NKD2 308 aa24.63■■□□□ 1.53
PTPRF-207ENST00000436724 CC2D2BQ6DHV5 1058 aa24.63■■□□□ 1.53
PTPRF-207ENST00000436724 CCDC82Q8N4S0 544 aa24.63■■□□□ 1.53
PTPRF-207ENST00000436724 C8orf76Q96K31 380 aa24.63■■□□□ 1.53
PTPRF-207ENST00000436724 PPIP5K2O43314 1243 aa24.62■■□□□ 1.53
PTPRF-207ENST00000436724 KRT85P78386 507 aa24.62■■□□□ 1.53
PTPRF-207ENST00000436724 PICALMQ13492 652 aa24.62■■□□□ 1.53
PTPRF-207ENST00000436724 RTN1Q16799 776 aa24.62■■□□□ 1.53
PTPRF-207ENST00000436724 DACT2Q5SW24 774 aa24.62■■□□□ 1.53
PTPRF-207ENST00000436724 STRIP1Q5VSL9 837 aa24.62■■□□□ 1.53
PTPRF-207ENST00000436724 ROBO3Q96MS0 1386 aa24.62■■□□□ 1.53
PTPRF-207ENST00000436724 CDKL5O76039 1030 aa24.61■■□□□ 1.53
PTPRF-207ENST00000436724 CPLX2Q6PUV4 134 aaKnown RBP24.61■■□□□ 1.53
PTPRF-207ENST00000436724 PCDHAC2Q9Y5I4 1007 aa24.61■■□□□ 1.53
PTPRF-207ENST00000436724 DDX60LQ5H9U9 1706 aaKnown RBP24.61■■□□□ 1.53
PTPRF-207ENST00000436724 IARSP41252 1262 aaKnown RBP24.61■■□□□ 1.53
PTPRF-207ENST00000436724 TFAP4Q01664 338 aa24.61■■□□□ 1.53
PTPRF-207ENST00000436724 FANCBQ8NB91 859 aa24.61■■□□□ 1.53
PTPRF-207ENST00000436724 ZSCAN16Q9H4T2 348 aaPredicted RBP24.61■■□□□ 1.53
PTPRF-207ENST00000436724 MKNK2Q9HBH9 465 aa24.61■■□□□ 1.53
PTPRF-207ENST00000436724 RRAGDQ9NQL2 400 aaPredicted RBP24.61■■□□□ 1.53
PTPRF-207ENST00000436724 NID2Q14112 1375 aa24.61■■□□□ 1.53
PTPRF-207ENST00000436724 TTC6Q86TZ1 520 aa24.6■■□□□ 1.53
PTPRF-207ENST00000436724 FBXO18Q8NFZ0 1043 aa24.6■■□□□ 1.53
PTPRF-207ENST00000436724 USP17L3A6NCW0 530 aa24.6■■□□□ 1.53
PTPRF-207ENST00000436724 USP17L4A6NCW7 530 aa24.6■■□□□ 1.53
PTPRF-207ENST00000436724 YDJCA8MPS7 323 aa24.6■■□□□ 1.53
PTPRF-207ENST00000436724 R3HDM1Q15032 1099 aaKnown RBP24.6■■□□□ 1.53
PTPRF-207ENST00000436724 USP17L1Q7RTZ2 530 aa24.6■■□□□ 1.53
PTPRF-207ENST00000436724 TEKT1Q969V4 418 aa24.6■■□□□ 1.53
PTPRF-207ENST00000436724 SLC26A6Q9BXS9 759 aa24.6■■□□□ 1.53
PTPRF-207ENST00000436724 DDX4Q9NQI0 724 aaKnown RBP24.6■■□□□ 1.53
PTPRF-207ENST00000436724 TMEM63CQ9P1W3 806 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms