RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 PRKG1Q13976 671 aa19.98■□□□□ 0.79
CALD1-209ENST00000436461 NECTIN1Q15223 517 aa19.98■□□□□ 0.79
CALD1-209ENST00000436461 DHX36Q9H2U1 1008 aaKnown RBP19.98■□□□□ 0.79
CALD1-209ENST00000436461 DNAJC18Q9H819 358 aa19.98■□□□□ 0.79
CALD1-209ENST00000436461 ZNF213O14771 459 aa19.98■□□□□ 0.79
CALD1-209ENST00000436461 HLA-DOAP06340 250 aa19.98■□□□□ 0.79
CALD1-209ENST00000436461 CREB3L3Q68CJ9 461 aa19.98■□□□□ 0.79
CALD1-209ENST00000436461 TTC6Q86TZ1 520 aa19.98■□□□□ 0.79
CALD1-209ENST00000436461 TBC1D10CQ8IV04 446 aa19.98■□□□□ 0.79
CALD1-209ENST00000436461 AMOTL1Q8IY63 956 aa19.98■□□□□ 0.79
CALD1-209ENST00000436461 ZNF408Q9H9D4 720 aa19.98■□□□□ 0.79
CALD1-209ENST00000436461 PI4KBQ9UBF8 816 aa19.98■□□□□ 0.79
CALD1-209ENST00000436461 PPP2R3BQ9Y5P8 575 aa19.98■□□□□ 0.79
CALD1-209ENST00000436461 SLC27A2O14975 620 aa19.97■□□□□ 0.79
CALD1-209ENST00000436461 IMMTQ16891 758 aaKnown RBP19.97■□□□□ 0.79
CALD1-209ENST00000436461 CTNNA3Q9UI47 895 aa19.97■□□□□ 0.79
CALD1-209ENST00000436461 PRDM1O75626 825 aa19.96■□□□□ 0.79
CALD1-209ENST00000436461 RASEFQ8IZ41 740 aa19.96■□□□□ 0.79
CALD1-209ENST00000436461 CRACR2BQ8N4Y2 399 aaPredicted RBP19.96■□□□□ 0.79
CALD1-209ENST00000436461 SERPINB13Q9UIV8 391 aa19.96■□□□□ 0.79
CALD1-209ENST00000436461 ITGBL1O95965 494 aaPredicted RBP19.95■□□□□ 0.78
CALD1-209ENST00000436461 GABPAQ06546 454 aa19.95■□□□□ 0.78
CALD1-209ENST00000436461 NKX2-3Q8TAU0 364 aa19.95■□□□□ 0.78
CALD1-209ENST00000436461 HSPA4P34932 840 aa19.94■□□□□ 0.78
CALD1-209ENST00000436461 STOX1Q6ZVD7 989 aa19.94■□□□□ 0.78
CALD1-209ENST00000436461 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.94■□□□□ 0.783e-13■■■■■ 29.2
CALD1-209ENST00000436461 ANAPC4Q9UJX5 808 aa19.94■□□□□ 0.78
CALD1-209ENST00000436461 ROBO3Q96MS0 1386 aa19.94■□□□□ 0.78
CALD1-209ENST00000436461 TOMM70O94826 608 aa19.94■□□□□ 0.78
CALD1-209ENST00000436461 MOB2Q70IA6 237 aa19.94■□□□□ 0.78
CALD1-209ENST00000436461 TRIM34Q9BYJ4 488 aa19.94■□□□□ 0.78
CALD1-209ENST00000436461 EHD4Q9H223 541 aa19.94■□□□□ 0.78
CALD1-209ENST00000436461 TRPM7Q96QT4 1865 aa19.93■□□□□ 0.78
CALD1-209ENST00000436461 NEDD4P46934 1319 aa19.93■□□□□ 0.78
CALD1-209ENST00000436461 SHMT1P34896 483 aa19.93■□□□□ 0.78
CALD1-209ENST00000436461 CDK8P49336 464 aa19.93■□□□□ 0.78
CALD1-209ENST00000436461 COL9A3Q14050 684 aaPredicted RBP19.93■□□□□ 0.78
CALD1-209ENST00000436461 RRP1BQ14684 758 aaKnown RBP19.93■□□□□ 0.78
CALD1-209ENST00000436461 SHROOM1Q2M3G4 852 aaPredicted RBP19.93■□□□□ 0.78
CALD1-209ENST00000436461 SUPT20HL1Q3ZLR7 823 aa19.93■□□□□ 0.78
CALD1-209ENST00000436461 C16orf86Q6ZW13 317 aa19.93■□□□□ 0.78
CALD1-209ENST00000436461 SMC1BQ8NDV3 1235 aa19.93■□□□□ 0.78
CALD1-209ENST00000436461 OTOFQ9HC10 1997 aa19.92■□□□□ 0.78
CALD1-209ENST00000436461 RRP12Q5JTH9 1297 aaKnown RBP19.92■□□□□ 0.78
CALD1-209ENST00000436461 AKNAD1Q5T1N1 836 aa19.92■□□□□ 0.78
CALD1-209ENST00000436461 METTL16Q86W50 562 aaKnown RBP19.92■□□□□ 0.78
CALD1-209ENST00000436461 FOXP4Q8IVH2 680 aaPredicted RBP19.92■□□□□ 0.78
CALD1-209ENST00000436461 TOMM22Q9NS69 142 aa19.92■□□□□ 0.78
CALD1-209ENST00000436461 ATAD5Q96QE3 1844 aa19.91■□□□□ 0.78
CALD1-209ENST00000436461 RBM46Q8TBY0 533 aaKnown RBP19.91■□□□□ 0.78
CALD1-209ENST00000436461 STAG1Q8WVM7 1258 aa19.91■□□□□ 0.78
CALD1-209ENST00000436461 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.91■□□□□ 0.78
CALD1-209ENST00000436461 HERC5Q9UII4 1024 aaKnown RBP19.91■□□□□ 0.78
CALD1-209ENST00000436461 SNX14Q9Y5W7 946 aa19.91■□□□□ 0.78
CALD1-209ENST00000436461 E7EWF7 191 aa19.91■□□□□ 0.78
CALD1-209ENST00000436461 EPB41L2O43491 1005 aaKnown RBP19.91■□□□□ 0.78
CALD1-209ENST00000436461 CELF2O95319 508 aaKnown RBP19.91■□□□□ 0.78
CALD1-209ENST00000436461 GDF11O95390 407 aa19.91■□□□□ 0.78
CALD1-209ENST00000436461 SLC3A2P08195 630 aaKnown RBP19.91■□□□□ 0.78
CALD1-209ENST00000436461 ADCK5Q3MIX3 580 aa19.91■□□□□ 0.78
CALD1-209ENST00000436461 RNF20Q5VTR2 975 aa19.91■□□□□ 0.78
CALD1-209ENST00000436461 MFSD6Q6ZSS7 791 aa19.91■□□□□ 0.78
CALD1-209ENST00000436461 MKNK2Q9HBH9 465 aa19.91■□□□□ 0.78
CALD1-209ENST00000436461 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.91■□□□□ 0.78
CALD1-209ENST00000436461 B4E1Z4 1266 aa19.9■□□□□ 0.78
CALD1-209ENST00000436461 TBC1D12O60347 775 aa19.9■□□□□ 0.78
CALD1-209ENST00000436461 USP2O75604 605 aaPredicted RBP19.9■□□□□ 0.78
CALD1-209ENST00000436461 MCCP23508 829 aa19.9■□□□□ 0.78
CALD1-209ENST00000436461 NF2P35240 595 aa19.9■□□□□ 0.78
CALD1-209ENST00000436461 MAP3K10Q02779 954 aa19.9■□□□□ 0.78
CALD1-209ENST00000436461 PDE4BQ07343 736 aa19.9■□□□□ 0.78
CALD1-209ENST00000436461 TTLL12Q14166 644 aaPredicted RBP19.9■□□□□ 0.78
CALD1-209ENST00000436461 FAM47AQ5JRC9 791 aa19.9■□□□□ 0.78
CALD1-209ENST00000436461 DCAF15Q66K64 600 aa19.9■□□□□ 0.78
CALD1-209ENST00000436461 C22orf23Q9BZE7 217 aa19.9■□□□□ 0.78
CALD1-209ENST00000436461 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.9■□□□□ 0.78
CALD1-209ENST00000436461 ANGEL1Q9UNK9 670 aaKnown RBP19.9■□□□□ 0.78
CALD1-209ENST00000436461 PAPPA2Q9BXP8 1791 aa19.9■□□□□ 0.78
CALD1-209ENST00000436461 PHF20L1A8MW92 1017 aa19.89■□□□□ 0.77
CALD1-209ENST00000436461 EIF5BO60841 1220 aaKnown RBP19.89■□□□□ 0.77
CALD1-209ENST00000436461 RASA1P20936 1047 aa19.89■□□□□ 0.77
CALD1-209ENST00000436461 INPP5BP32019 993 aa19.89■□□□□ 0.77
CALD1-209ENST00000436461 JAG1P78504 1218 aa19.89■□□□□ 0.77
CALD1-209ENST00000436461 CST9Q5W186 159 aa19.89■□□□□ 0.77
CALD1-209ENST00000436461 KCNB2Q92953 911 aa19.89■□□□□ 0.77
CALD1-209ENST00000436461 WRNIP1Q96S55 665 aa19.89■□□□□ 0.77
CALD1-209ENST00000436461 ZNF341Q9BYN7 854 aa19.89■□□□□ 0.77
CALD1-209ENST00000436461 SWAP70Q9UH65 585 aa19.89■□□□□ 0.77
CALD1-209ENST00000436461 PASKQ96RG2 1323 aa19.89■□□□□ 0.77
CALD1-209ENST00000436461 AKR1B1P15121 316 aa19.88■□□□□ 0.77
CALD1-209ENST00000436461 ZKSCAN1P17029 563 aaPredicted RBP19.88■□□□□ 0.77
CALD1-209ENST00000436461 TATDN1Q6P1N9 297 aa19.88■□□□□ 0.77
CALD1-209ENST00000436461 ZKSCAN4Q969J2 545 aaPredicted RBP19.88■□□□□ 0.77
CALD1-209ENST00000436461 KLRG1Q96E93 195 aa19.88■□□□□ 0.77
CALD1-209ENST00000436461 UPF2Q9HAU5 1272 aaKnown RBP19.88■□□□□ 0.77
CALD1-209ENST00000436461 PPP1R12BO60237 982 aaPredicted RBP19.87■□□□□ 0.77
CALD1-209ENST00000436461 RANBP6O60518 1105 aaKnown RBP19.87■□□□□ 0.77
CALD1-209ENST00000436461 FGRP09769 529 aa19.87■□□□□ 0.77
CALD1-209ENST00000436461 CPA1P15085 419 aa19.87■□□□□ 0.77
CALD1-209ENST00000436461 CERKLQ49MI3 558 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms