RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 XPOTO43592 962 aaKnown RBP12.43□□□□□ -0.42
SCN4A-201ENST00000435607 S100BP04271 92 aaPredicted RBP12.43□□□□□ -0.42
SCN4A-201ENST00000435607 MAN1A1P33908 653 aa12.43□□□□□ -0.42
SCN4A-201ENST00000435607 ZYXQ15942 572 aaKnown RBP12.43□□□□□ -0.42
SCN4A-201ENST00000435607 TRIML1Q8N9V2 468 aa12.43□□□□□ -0.42
SCN4A-201ENST00000435607 GCNAQ96QF7 691 aa12.43□□□□□ -0.42
SCN4A-201ENST00000435607 NOC4LQ9BVI4 516 aaKnown RBP12.43□□□□□ -0.42
SCN4A-201ENST00000435607 C1orf228Q6PIY5 440 aa12.43□□□□□ -0.42
SCN4A-201ENST00000435607 CHURC1Q8WUH1 139 aa12.43□□□□□ -0.42
SCN4A-201ENST00000435607 ANAPC5Q9UJX4 755 aa12.43□□□□□ -0.42
SCN4A-201ENST00000435607 IL16Q14005 1332 aa12.43□□□□□ -0.42
SCN4A-201ENST00000435607 ARHGEF37A1IGU5 675 aa12.43□□□□□ -0.42
SCN4A-201ENST00000435607 PTPREP23469 700 aa12.43□□□□□ -0.42
SCN4A-201ENST00000435607 DEPTORQ8TB45 409 aa12.43□□□□□ -0.42
SCN4A-201ENST00000435607 NFKBIAP25963 317 aa12.42□□□□□ -0.42
SCN4A-201ENST00000435607 BMP2KLQ5H9B9 411 aa12.42□□□□□ -0.42
SCN4A-201ENST00000435607 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.42□□□□□ -0.42
SCN4A-201ENST00000435607 DNAI1Q9UI46 699 aa12.42□□□□□ -0.42
SCN4A-201ENST00000435607 TTC22Q5TAA0 569 aa12.42□□□□□ -0.42
SCN4A-201ENST00000435607 NSMFQ6X4W1 530 aa12.42□□□□□ -0.42
SCN4A-201ENST00000435607 CAPZA3Q96KX2 299 aa12.42□□□□□ -0.42
SCN4A-201ENST00000435607 ANO6Q4KMQ2 910 aa12.42□□□□□ -0.42
SCN4A-201ENST00000435607 CHST3Q7LGC8 479 aa12.42□□□□□ -0.42
SCN4A-201ENST00000435607 PHLDB2Q86SQ0 1253 aa12.42□□□□□ -0.42
SCN4A-201ENST00000435607 CSRNP1Q96S65 589 aa12.42□□□□□ -0.42
SCN4A-201ENST00000435607 ITKQ08881 620 aa12.42□□□□□ -0.42
SCN4A-201ENST00000435607 KRT81Q14533 505 aa12.42□□□□□ -0.42
SCN4A-201ENST00000435607 ATL3Q6DD88 541 aa12.42□□□□□ -0.42
SCN4A-201ENST00000435607 PPP4R1Q8TF05 950 aa12.42□□□□□ -0.42
SCN4A-201ENST00000435607 CHMP6Q96FZ7 201 aa12.42□□□□□ -0.42
SCN4A-201ENST00000435607 DCAF5Q96JK2 942 aa12.42□□□□□ -0.42
SCN4A-201ENST00000435607 HEXIM1O94992 359 aaKnown RBP12.42□□□□□ -0.42
SCN4A-201ENST00000435607 GBP1P32455 592 aa12.42□□□□□ -0.42
SCN4A-201ENST00000435607 RFC1P35251 1148 aaPredicted RBP12.42□□□□□ -0.42
SCN4A-201ENST00000435607 MAP3K21Q5TCX8 1036 aa12.42□□□□□ -0.42
SCN4A-201ENST00000435607 CCNA1P78396 465 aa12.42□□□□□ -0.42
SCN4A-201ENST00000435607 MCF2L2Q86YR7 1114 aa12.42□□□□□ -0.42
SCN4A-201ENST00000435607 SYCE1Q8N0S2 351 aa12.42□□□□□ -0.42
SCN4A-201ENST00000435607 PRPF38AQ8NAV1 312 aaKnown RBP12.42□□□□□ -0.42
SCN4A-201ENST00000435607 DACT3Q96B18 629 aaPredicted RBP12.42□□□□□ -0.42
SCN4A-201ENST00000435607 NCOA1Q15788 1441 aa12.41□□□□□ -0.42
SCN4A-201ENST00000435607 TNNC2P02585 160 aa12.41□□□□□ -0.42
SCN4A-201ENST00000435607 HS1BP3Q53T59 392 aa12.41□□□□□ -0.42
SCN4A-201ENST00000435607 HSP90AA4PQ58FG1 418 aa12.41□□□□□ -0.42
SCN4A-201ENST00000435607 ARHGEF16Q5VV41 709 aa12.41□□□□□ -0.42
SCN4A-201ENST00000435607 NCAPH2Q6IBW4 605 aa12.41□□□□□ -0.42
SCN4A-201ENST00000435607 BRPF3Q9ULD4 1205 aa12.41□□□□□ -0.42
SCN4A-201ENST00000435607 PPFIA3O75145 1194 aa12.41□□□□□ -0.42
SCN4A-201ENST00000435607 SKILP12757 684 aa12.41□□□□□ -0.42
SCN4A-201ENST00000435607 LMNB1P20700 586 aa12.41□□□□□ -0.42
SCN4A-201ENST00000435607 TMTC4Q5T4D3 741 aa12.41□□□□□ -0.42
SCN4A-201ENST00000435607 PRIMPOLQ96LW4 560 aa12.41□□□□□ -0.42
SCN4A-201ENST00000435607 TTC41PQ6P2S7 1318 aa12.41□□□□□ -0.42
SCN4A-201ENST00000435607 MAP3K7O43318 606 aa12.41□□□□□ -0.42
SCN4A-201ENST00000435607 IRX4P78413 519 aa12.41□□□□□ -0.42
SCN4A-201ENST00000435607 GADL1Q6ZQY3 521 aa12.41□□□□□ -0.42
SCN4A-201ENST00000435607 CCDC170Q8IYT3 715 aa12.41□□□□□ -0.42
SCN4A-201ENST00000435607 MYCT1Q8N699 235 aa12.41□□□□□ -0.42
SCN4A-201ENST00000435607 AOPEPQ8N6M6 819 aa12.41□□□□□ -0.42
SCN4A-201ENST00000435607 NUP58Q9BVL2 599 aa12.41□□□□□ -0.42
SCN4A-201ENST00000435607 LRRC2Q9BYS8 371 aa12.41□□□□□ -0.42
SCN4A-201ENST00000435607 PPIP5K2O43314 1243 aa12.41□□□□□ -0.42
SCN4A-201ENST00000435607 INPP1P49441 399 aa12.41□□□□□ -0.42
SCN4A-201ENST00000435607 PUM3Q15397 648 aaKnown RBP12.41□□□□□ -0.42
SCN4A-201ENST00000435607 DNAJC21Q5F1R6 531 aaKnown RBP12.41□□□□□ -0.42
SCN4A-201ENST00000435607 MCUR1Q96AQ8 359 aa12.41□□□□□ -0.42
SCN4A-201ENST00000435607 NUCKS1Q9H1E3 243 aaKnown RBP12.41□□□□□ -0.42
SCN4A-201ENST00000435607 C19orf44Q9H6X5 657 aa12.41□□□□□ -0.42
SCN4A-201ENST00000435607 DDX39AO00148 427 aaKnown RBP12.41□□□□□ -0.42
SCN4A-201ENST00000435607 TNNI1P19237 187 aa12.41□□□□□ -0.42
SCN4A-201ENST00000435607 HHATQ5VTY9 493 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 TBC1D9Q6ZT07 1266 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 NUCB1Q02818 461 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 PDE4DQ08499 809 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 PRPSAP1Q14558 356 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 ARHGAP27Q6ZUM4 889 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 PAGR1Q9BTK6 254 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 AP5M1Q9H0R1 490 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 VWA3AA6NCI4 1184 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 GSTA1P08263 222 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 GSTA2P09210 222 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 NAA25Q14CX7 972 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 PRR16Q569H4 304 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 RSRC1Q96IZ7 334 aaKnown RBP12.4□□□□□ -0.42
SCN4A-201ENST00000435607 GDPD2Q9HCC8 539 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 ANKRD36BQ8N2N9 1353 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 PLEKHG3A1L390 1219 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 SPDYE2BA6NHP3 402 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 SPDYE6P0CI01 402 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 SPDYE1Q8NFV5 336 aaPredicted RBP12.4□□□□□ -0.42
SCN4A-201ENST00000435607 APBA3O96018 575 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 ERCC3P19447 782 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 EXOC8Q8IYI6 725 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 RSAD2Q8WXG1 361 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 P3H4Q92791 437 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 ASIC3Q9UHC3 531 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 USTQ9Y2C2 406 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 ADCY7P51828 1080 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 ARHGAP4P98171 946 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 KIAA1841Q6NSI8 718 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms