RNA–Protein interactions for RNA: ENST00000435252.1

GTF3C3-204, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-204ENST00000435252 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.7□□□□□ -1.18
GTF3C3-204ENST00000435252 BNC2Q6ZN30 1099 aaPredicted RBP7.7□□□□□ -1.18
GTF3C3-204ENST00000435252 CYFIP1Q7L576 1253 aa7.7□□□□□ -1.18
GTF3C3-204ENST00000435252 ZNF296Q8WUU4 475 aaPredicted RBP7.7□□□□□ -1.18
GTF3C3-204ENST00000435252 SPATA32Q96LK8 384 aa7.7□□□□□ -1.18
GTF3C3-204ENST00000435252 LRRC3Q9BY71 257 aa7.7□□□□□ -1.18
GTF3C3-204ENST00000435252 HMX2A2RU54 273 aa7.69□□□□□ -1.18
GTF3C3-204ENST00000435252 FAM221AA4D161 298 aa7.69□□□□□ -1.18
GTF3C3-204ENST00000435252 IGLV1-40P01703 118 aa7.69□□□□□ -1.18
GTF3C3-204ENST00000435252 CYP27A1Q02318 531 aa7.69□□□□□ -1.18
GTF3C3-204ENST00000435252 RING1Q06587 406 aa7.69□□□□□ -1.18
GTF3C3-204ENST00000435252 APOBRQ0VD83 1088 aa7.69□□□□□ -1.18
GTF3C3-204ENST00000435252 NFIAQ12857 509 aa7.69□□□□□ -1.18
GTF3C3-204ENST00000435252 CPSF6Q16630 551 aaKnown RBP eCLIP7.69□□□□□ -1.18
GTF3C3-204ENST00000435252 ZNF394Q53GI3 561 aa7.69□□□□□ -1.18
GTF3C3-204ENST00000435252 FBXL19Q6PCT2 694 aa7.69□□□□□ -1.18
GTF3C3-204ENST00000435252 ISL2Q96A47 359 aa7.69□□□□□ -1.18
GTF3C3-204ENST00000435252 TBC1D32Q96NH3 1257 aa7.69□□□□□ -1.18
GTF3C3-204ENST00000435252 METTL22Q9BUU2 404 aaPredicted RBP7.69□□□□□ -1.18
GTF3C3-204ENST00000435252 TGIF2Q9GZN2 237 aa7.69□□□□□ -1.18
GTF3C3-204ENST00000435252 WNT10AQ9GZT5 417 aa7.69□□□□□ -1.18
GTF3C3-204ENST00000435252 SEMA6BQ9H3T3 888 aa7.69□□□□□ -1.18
GTF3C3-204ENST00000435252 CCSER2Q9H7U1 834 aa7.69□□□□□ -1.18
GTF3C3-204ENST00000435252 DDX41Q9UJV9 622 aaKnown RBP7.69□□□□□ -1.18
GTF3C3-204ENST00000435252 PCDHGB7Q9Y5F8 929 aa7.69□□□□□ -1.18
GTF3C3-204ENST00000435252 ERCC5P28715 1186 aaPredicted RBP7.68□□□□□ -1.18
GTF3C3-204ENST00000435252 REC114Q7Z4M0 266 aa7.68□□□□□ -1.18
GTF3C3-204ENST00000435252 METTL16Q86W50 562 aaKnown RBP7.68□□□□□ -1.18
GTF3C3-204ENST00000435252 HID1Q8IV36 788 aa7.68□□□□□ -1.18
GTF3C3-204ENST00000435252 NT5C1AQ9BXI3 368 aa7.68□□□□□ -1.18
GTF3C3-204ENST00000435252 ADAMTS1Q9UHI8 967 aa7.68□□□□□ -1.18
GTF3C3-204ENST00000435252 ADAM30Q9UKF2 790 aa7.68□□□□□ -1.18
GTF3C3-204ENST00000435252 GFRA2O00451 464 aa7.67□□□□□ -1.18
GTF3C3-204ENST00000435252 PGRP06401 933 aa7.67□□□□□ -1.18
GTF3C3-204ENST00000435252 NEFMP07197 916 aa7.67□□□□□ -1.18
GTF3C3-204ENST00000435252 GRK4P32298 578 aa7.67□□□□□ -1.18
GTF3C3-204ENST00000435252 ATG3Q9NT62 314 aa7.67□□□□□ -1.18
GTF3C3-204ENST00000435252 PRKAG2Q9UGJ0 569 aa7.67□□□□□ -1.18
GTF3C3-204ENST00000435252 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.67□□□□□ -1.18
GTF3C3-204ENST00000435252 GREM1O60565 184 aa7.66□□□□□ -1.18
GTF3C3-204ENST00000435252 GARTP22102 1010 aa7.66□□□□□ -1.18
GTF3C3-204ENST00000435252 ZNF165P49910 485 aa7.66□□□□□ -1.18
GTF3C3-204ENST00000435252 CYP27C1Q4G0S4 372 aa7.66□□□□□ -1.18
GTF3C3-204ENST00000435252 NKD1Q969G9 470 aa7.66□□□□□ -1.18
GTF3C3-204ENST00000435252 TLR3O15455 904 aaKnown RBP7.65□□□□□ -1.18
GTF3C3-204ENST00000435252 PLCG1P19174 1290 aa7.65□□□□□ -1.18
GTF3C3-204ENST00000435252 GNL2Q13823 731 aaKnown RBP7.65□□□□□ -1.18
GTF3C3-204ENST00000435252 COL9A2Q14055 689 aaPredicted RBP7.65□□□□□ -1.18
GTF3C3-204ENST00000435252 PRSS36Q5K4E3 855 aa7.65□□□□□ -1.18
GTF3C3-204ENST00000435252 C9orf131Q5VYM1 1079 aa7.65□□□□□ -1.18
GTF3C3-204ENST00000435252 DUSP27Q5VZP5 1158 aa7.65□□□□□ -1.18
GTF3C3-204ENST00000435252 ZAR1Q86SH2 424 aa7.65□□□□□ -1.18
GTF3C3-204ENST00000435252 MFSD14AQ96MC6 490 aa7.65□□□□□ -1.18
GTF3C3-204ENST00000435252 OSBPL1AQ9BXW6 950 aa7.65□□□□□ -1.18
GTF3C3-204ENST00000435252 LRIG2O94898 1065 aa7.64□□□□□ -1.19
GTF3C3-204ENST00000435252 NTF4P34130 210 aa7.64□□□□□ -1.19
GTF3C3-204ENST00000435252 CAP2P40123 477 aa7.64□□□□□ -1.19
GTF3C3-204ENST00000435252 CDK8P49336 464 aa7.64□□□□□ -1.19
GTF3C3-204ENST00000435252 YARSP54577 528 aaKnown RBP7.64□□□□□ -1.19
GTF3C3-204ENST00000435252 REXO1Q8N1G1 1221 aaKnown RBP7.64□□□□□ -1.19
GTF3C3-204ENST00000435252 FBXL6Q8N531 539 aa7.64□□□□□ -1.19
GTF3C3-204ENST00000435252 MFSD2AQ8NA29 543 aa7.64□□□□□ -1.19
GTF3C3-204ENST00000435252 UBP1Q9NZI7 540 aa7.64□□□□□ -1.19
GTF3C3-204ENST00000435252 PRR36Q9H6K5 1346 aa7.63□□□□□ -1.19
GTF3C3-204ENST00000435252 MCM4P33991 863 aa7.63□□□□□ -1.19
GTF3C3-204ENST00000435252 GRIK1P39086 918 aa7.63□□□□□ -1.19
GTF3C3-204ENST00000435252 RACK1P63244 317 aaKnown RBP7.63□□□□□ -1.19
GTF3C3-204ENST00000435252 SEZ6Q53EL9 994 aa7.63□□□□□ -1.19
GTF3C3-204ENST00000435252 SLC6A19Q695T7 634 aa7.63□□□□□ -1.19
GTF3C3-204ENST00000435252 ZNF746Q6NUN9 644 aaPredicted RBP7.63□□□□□ -1.19
GTF3C3-204ENST00000435252 SEZ6L2Q6UXD5 910 aa7.63□□□□□ -1.19
GTF3C3-204ENST00000435252 SLITRK4Q8IW52 837 aa7.63□□□□□ -1.19
GTF3C3-204ENST00000435252 FOXQ1Q9C009 403 aa7.63□□□□□ -1.19
GTF3C3-204ENST00000435252 LGR6Q9HBX8 967 aa7.63□□□□□ -1.19
GTF3C3-204ENST00000435252 WDR64B1ANS9 1081 aa7.62□□□□□ -1.19
GTF3C3-204ENST00000435252 IMPDH2P12268 514 aa7.62□□□□□ -1.19
GTF3C3-204ENST00000435252 ARMCX6Q7L4S7 300 aa7.62□□□□□ -1.19
GTF3C3-204ENST00000435252 MRPL41Q8IXM3 137 aaKnown RBP7.62□□□□□ -1.19
GTF3C3-204ENST00000435252 FBXO27Q8NI29 283 aa7.62□□□□□ -1.19
GTF3C3-204ENST00000435252 SHKBP1Q8TBC3 707 aa7.62□□□□□ -1.19
GTF3C3-204ENST00000435252 GPRASP2Q96D09 838 aa7.62□□□□□ -1.19
GTF3C3-204ENST00000435252 EAF1Q96JC9 268 aaPredicted RBP7.62□□□□□ -1.19
GTF3C3-204ENST00000435252 TMEM87BQ96K49 555 aa7.62□□□□□ -1.19
GTF3C3-204ENST00000435252 C1GALT1Q9NS00 363 aa7.62□□□□□ -1.19
GTF3C3-204ENST00000435252 INPP5FQ9Y2H2 1132 aa7.62□□□□□ -1.19
GTF3C3-204ENST00000435252 GRIN3BO60391 1043 aa7.61□□□□□ -1.19
GTF3C3-204ENST00000435252 HTR3BO95264 441 aa7.61□□□□□ -1.19
GTF3C3-204ENST00000435252 CRKP46108 304 aa7.61□□□□□ -1.19
GTF3C3-204ENST00000435252 PAK2Q13177 524 aa7.61□□□□□ -1.19
GTF3C3-204ENST00000435252 CDK5R2Q13319 367 aa7.61□□□□□ -1.19
GTF3C3-204ENST00000435252 LRRFIP1Q32MZ4 808 aaKnown RBP7.61□□□□□ -1.19
GTF3C3-204ENST00000435252 TMEM201Q5SNT2 666 aa7.61□□□□□ -1.19
GTF3C3-204ENST00000435252 OGFOD3Q6PK18 319 aa7.61□□□□□ -1.19
GTF3C3-204ENST00000435252 NPM2Q86SE8 214 aaKnown RBP7.61□□□□□ -1.19
GTF3C3-204ENST00000435252 VPS37DQ86XT2 251 aa7.61□□□□□ -1.19
GTF3C3-204ENST00000435252 MCATQ8IVS2 390 aaKnown RBP7.61□□□□□ -1.19
GTF3C3-204ENST00000435252 BRMS1Q9HCU9 246 aa7.61□□□□□ -1.19
GTF3C3-204ENST00000435252 PRDM10Q9NQV6 1147 aa7.61□□□□□ -1.19
GTF3C3-204ENST00000435252 REV1Q9UBZ9 1251 aa7.61□□□□□ -1.19
GTF3C3-204ENST00000435252 LEMD3Q9Y2U8 911 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms