RNA–Protein interactions for RNA: ENST00000433655.5

CTSD-204, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 2,006 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-204ENST00000433655 HPSEQ9Y251 543 aa19.68■□□□□ 0.74
CTSD-204ENST00000433655 KIAA1551Q9HCM1 1747 aa19.68■□□□□ 0.74
CTSD-204ENST00000433655 TRIM29Q14134 588 aa19.68■□□□□ 0.74
CTSD-204ENST00000433655 NBPF5PQ86XG9 351 aaPredicted RBP19.68■□□□□ 0.74
CTSD-204ENST00000433655 CMTR1Q8N1G2 835 aaKnown RBP19.68■□□□□ 0.74
CTSD-204ENST00000433655 TNKSO95271 1327 aa19.67■□□□□ 0.74
CTSD-204ENST00000433655 PDS5AQ29RF7 1337 aaKnown RBP19.67■□□□□ 0.74
CTSD-204ENST00000433655 IRS2Q9Y4H2 1338 aa19.67■□□□□ 0.74
CTSD-204ENST00000433655 FAM237AA0A1B0GTK4 181 aa19.67■□□□□ 0.74
CTSD-204ENST00000433655 GOLGA6L19H0YKK7 550 aa19.67■□□□□ 0.74
CTSD-204ENST00000433655 SEMA3EO15041 775 aa19.67■□□□□ 0.74
CTSD-204ENST00000433655 MMP1P03956 469 aa19.67■□□□□ 0.74
CTSD-204ENST00000433655 TM4SF1P30408 202 aa19.67■□□□□ 0.74
CTSD-204ENST00000433655 DPCR1Q3MIW9 517 aa19.67■□□□□ 0.74
CTSD-204ENST00000433655 FAM182BQ5T319 152 aa19.67■□□□□ 0.74
CTSD-204ENST00000433655 CRACR2BQ8N4Y2 399 aaPredicted RBP19.67■□□□□ 0.74
CTSD-204ENST00000433655 NSUN4Q96CB9 384 aaKnown RBP19.67■□□□□ 0.74
CTSD-204ENST00000433655 NLRP3Q96P20 1036 aa19.67■□□□□ 0.74
CTSD-204ENST00000433655 CCDC88AQ3V6T2 1871 aa19.66■□□□□ 0.74
CTSD-204ENST00000433655 ERICH2A1L162 156 aa19.66■□□□□ 0.74
CTSD-204ENST00000433655 CCDC144BQ3MJ40 725 aa19.66■□□□□ 0.74
CTSD-204ENST00000433655 CEP57L1Q8IYX8 460 aa19.66■□□□□ 0.74
CTSD-204ENST00000433655 TMTC2Q8N394 836 aa19.66■□□□□ 0.74
CTSD-204ENST00000433655 FANCBQ8NB91 859 aa19.66■□□□□ 0.74
CTSD-204ENST00000433655 WASF1Q92558 559 aa19.66■□□□□ 0.74
CTSD-204ENST00000433655 FGRP09769 529 aa19.66■□□□□ 0.74
CTSD-204ENST00000433655 TOB1P50616 345 aaPredicted RBP19.66■□□□□ 0.74
CTSD-204ENST00000433655 LRMPQ12912 555 aa19.66■□□□□ 0.74
CTSD-204ENST00000433655 GNL2Q13823 731 aaKnown RBP19.66■□□□□ 0.74
CTSD-204ENST00000433655 NOSTRINQ8IVI9 506 aa19.66■□□□□ 0.74
CTSD-204ENST00000433655 AOPEPQ8N6M6 819 aa19.66■□□□□ 0.74
CTSD-204ENST00000433655 ESR2Q92731 530 aa19.66■□□□□ 0.74
CTSD-204ENST00000433655 SHISA4Q96DD7 197 aa19.66■□□□□ 0.74
CTSD-204ENST00000433655 MRFAP1L1Q96HT8 127 aa19.66■□□□□ 0.74
CTSD-204ENST00000433655 UBAC1Q9BSL1 405 aa19.66■□□□□ 0.74
CTSD-204ENST00000433655 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.66■□□□□ 0.74
CTSD-204ENST00000433655 CCNL1Q9UK58 526 aaPredicted RBP19.66■□□□□ 0.74
CTSD-204ENST00000433655 KCNJ14Q9UNX9 436 aa19.66■□□□□ 0.74
CTSD-204ENST00000433655 BTBD18B2RXH4 712 aa19.65■□□□□ 0.74
CTSD-204ENST00000433655 EVX2Q03828 476 aa19.65■□□□□ 0.74
CTSD-204ENST00000433655 ENAHQ8N8S7 591 aaPredicted RBP19.65■□□□□ 0.74
CTSD-204ENST00000433655 FBXW7Q969H0 707 aa19.65■□□□□ 0.74
CTSD-204ENST00000433655 TFCP2L1Q9NZI6 479 aa19.65■□□□□ 0.74
CTSD-204ENST00000433655 CLIP2Q9UDT6 1046 aa19.65■□□□□ 0.74
CTSD-204ENST00000433655 ZPR1O75312 459 aa19.64■□□□□ 0.74
CTSD-204ENST00000433655 MECOMQ03112 1051 aa19.64■□□□□ 0.74
CTSD-204ENST00000433655 RESP18Q5W5W9 173 aa19.64■□□□□ 0.74
CTSD-204ENST00000433655 CTR9Q6PD62 1173 aa19.64■□□□□ 0.74
CTSD-204ENST00000433655 DRC7Q8IY82 874 aa19.64■□□□□ 0.74
CTSD-204ENST00000433655 DIS3L2Q8IYB7 885 aaKnown RBP19.64■□□□□ 0.74
CTSD-204ENST00000433655 ARHGEF1Q92888 912 aaKnown RBP19.64■□□□□ 0.74
CTSD-204ENST00000433655 TIGD1Q96MW7 591 aa19.64■□□□□ 0.74
CTSD-204ENST00000433655 CLIC6Q96NY7 704 aa19.64■□□□□ 0.74
CTSD-204ENST00000433655 UQCRHLA0A096LP55 91 aa19.64■□□□□ 0.73
CTSD-204ENST00000433655 DEXIO95424 95 aa19.64■□□□□ 0.73
CTSD-204ENST00000433655 UQCRHP07919 91 aa19.64■□□□□ 0.73
CTSD-204ENST00000433655 SLC3A2P08195 630 aaKnown RBP19.64■□□□□ 0.73
CTSD-204ENST00000433655 SLC51AQ86UW1 340 aa19.64■□□□□ 0.73
CTSD-204ENST00000433655 TXNRD3Q86VQ6 643 aa19.64■□□□□ 0.73
CTSD-204ENST00000433655 TRIM22Q8IYM9 498 aa19.64■□□□□ 0.73
CTSD-204ENST00000433655 CCDC82Q8N4S0 544 aa19.64■□□□□ 0.73
CTSD-204ENST00000433655 NUP133Q8WUM0 1156 aa19.64■□□□□ 0.73
CTSD-204ENST00000433655 BPIFA3Q9BQP9 254 aa19.64■□□□□ 0.73
CTSD-204ENST00000433655 BECN2A8MW95 431 aa19.63■□□□□ 0.73
CTSD-204ENST00000433655 HIBADHP31937 336 aaKnown RBP19.63■□□□□ 0.73
CTSD-204ENST00000433655 SYKP43405 635 aa19.63■□□□□ 0.73
CTSD-204ENST00000433655 JMYQ8N9B5 988 aa19.63■□□□□ 0.73
CTSD-204ENST00000433655 ZSCAN10Q96SZ4 725 aaPredicted RBP19.63■□□□□ 0.73
CTSD-204ENST00000433655 ANKRD2Q9GZV1 360 aa19.63■□□□□ 0.73
CTSD-204ENST00000433655 RTCBQ9Y3I0 505 aaKnown RBP19.63■□□□□ 0.73
CTSD-204ENST00000433655 CCDC196A0A1B0GTZ2 297 aa19.63■□□□□ 0.73
CTSD-204ENST00000433655 NLRP12P59046 1061 aa19.63■□□□□ 0.73
CTSD-204ENST00000433655 FUT2Q10981 343 aa19.63■□□□□ 0.73
CTSD-204ENST00000433655 TPTE2Q6XPS3 522 aa19.63■□□□□ 0.73
CTSD-204ENST00000433655 NAT10Q9H0A0 1025 aaKnown RBP19.63■□□□□ 0.73
CTSD-204ENST00000433655 USP21Q9UK80 565 aa19.63■□□□□ 0.73
CTSD-204ENST00000433655 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.63■□□□□ 0.73
CTSD-204ENST00000433655 CUTAO60888 179 aa19.62■□□□□ 0.73
CTSD-204ENST00000433655 PRDM1O75626 825 aa19.62■□□□□ 0.73
CTSD-204ENST00000433655 PRDX5P30044 214 aa19.62■□□□□ 0.73
CTSD-204ENST00000433655 RBM6P78332 1123 aaKnown RBP19.62■□□□□ 0.73
CTSD-204ENST00000433655 CACTINQ8WUQ7 758 aaKnown RBP19.62■□□□□ 0.73
CTSD-204ENST00000433655 FOXP1Q9H334 677 aaPredicted RBP19.62■□□□□ 0.73
CTSD-204ENST00000433655 TUBE1Q9UJT0 475 aa19.62■□□□□ 0.73
CTSD-204ENST00000433655 UBAP1LF5GYI3 381 aa19.61■□□□□ 0.73
CTSD-204ENST00000433655 BIN1O00499 593 aa19.61■□□□□ 0.73
CTSD-204ENST00000433655 OXER1Q8TDS5 423 aa19.61■□□□□ 0.73
CTSD-204ENST00000433655 USP17L12C9JPN9 530 aa19.61■□□□□ 0.73
CTSD-204ENST00000433655 USP17L21D6R901 530 aa19.61■□□□□ 0.73
CTSD-204ENST00000433655 ZBTB22O15209 634 aa19.61■□□□□ 0.73
CTSD-204ENST00000433655 NR5A1Q13285 461 aa19.61■□□□□ 0.73
CTSD-204ENST00000433655 PKN1Q16512 942 aa19.61■□□□□ 0.73
CTSD-204ENST00000433655 DNTTIP2Q5QJE6 756 aaKnown RBP19.61■□□□□ 0.73
CTSD-204ENST00000433655 RNF26Q9BY78 433 aaPredicted RBP19.61■□□□□ 0.73
CTSD-204ENST00000433655 AATFQ9NY61 560 aaKnown RBP eCLIP19.61■□□□□ 0.73
CTSD-204ENST00000433655 PCP11498 1178 aaKnown RBP19.6■□□□□ 0.73
CTSD-204ENST00000433655 NCAPHQ15003 741 aa19.6■□□□□ 0.73
CTSD-204ENST00000433655 DCP1AQ9NPI6 582 aaPredicted RBP19.6■□□□□ 0.73
CTSD-204ENST00000433655 GRIN1Q05586 938 aa19.59■□□□□ 0.73
CTSD-204ENST00000433655 CHAF1AQ13111 956 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms