RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 ERCC6Q03468 1493 aa12.27□□□□□ -0.44
CCDC171-202ENST00000432954 CCDC18Q5T9S5 1454 aa12.27□□□□□ -0.44
CCDC171-202ENST00000432954 FYCO1Q9BQS8 1478 aa12.27□□□□□ -0.44
CCDC171-202ENST00000432954 GPR75-ASB3A0A0A6YYF3 556 aa12.27□□□□□ -0.45
CCDC171-202ENST00000432954 STAM2O75886 525 aa12.27□□□□□ -0.45
CCDC171-202ENST00000432954 MTA2O94776 668 aa12.27□□□□□ -0.45
CCDC171-202ENST00000432954 KCNJ6P48051 423 aa12.27□□□□□ -0.45
CCDC171-202ENST00000432954 CAMK2BQ13554 666 aa12.27□□□□□ -0.45
CCDC171-202ENST00000432954 CCSAPQ6IQ19 270 aaPredicted RBP12.27□□□□□ -0.45
CCDC171-202ENST00000432954 KANK3Q6NY19 840 aa12.27□□□□□ -0.45
CCDC171-202ENST00000432954 RSRC2Q7L4I2 434 aaKnown RBP12.27□□□□□ -0.45
CCDC171-202ENST00000432954 MAIP1Q8WWC4 291 aa12.27□□□□□ -0.45
CCDC171-202ENST00000432954 SNX27Q96L92 541 aa12.27□□□□□ -0.45
CCDC171-202ENST00000432954 ZFATQ9P243 1243 aa12.27□□□□□ -0.45
CCDC171-202ENST00000432954 KIAA1468Q9P260 1216 aa12.27□□□□□ -0.45
CCDC171-202ENST00000432954 HESX1Q9UBX0 185 aa12.27□□□□□ -0.45
CCDC171-202ENST00000432954 ASB3Q9Y575 518 aa12.27□□□□□ -0.45
CCDC171-202ENST00000432954 PLXNC1O60486 1568 aa12.27□□□□□ -0.45
CCDC171-202ENST00000432954 TBCAO75347 108 aaKnown RBP12.26□□□□□ -0.45
CCDC171-202ENST00000432954 GIGYF1O75420 1035 aaPredicted RBP12.26□□□□□ -0.45
CCDC171-202ENST00000432954 LUC7L3O95232 432 aaKnown RBP12.26□□□□□ -0.45
CCDC171-202ENST00000432954 PDHBP11177 359 aa12.26□□□□□ -0.45
CCDC171-202ENST00000432954 ALDH3A1P30838 453 aa12.26□□□□□ -0.45
CCDC171-202ENST00000432954 LRRC45Q96CN5 670 aa12.26□□□□□ -0.45
CCDC171-202ENST00000432954 TMCC3Q9ULS5 477 aa12.26□□□□□ -0.45
CCDC171-202ENST00000432954 PIK3R4Q99570 1358 aa12.26□□□□□ -0.45
CCDC171-202ENST00000432954 NESP48681 1621 aa12.26□□□□□ -0.45
CCDC171-202ENST00000432954 PSDA5PKW4 1024 aaPredicted RBP12.26□□□□□ -0.45
CCDC171-202ENST00000432954 ZBED4O75132 1171 aa12.26□□□□□ -0.45
CCDC171-202ENST00000432954 CLK1P49759 484 aaKnown RBP12.26□□□□□ -0.45
CCDC171-202ENST00000432954 ITIH3Q06033 890 aa12.26□□□□□ -0.45
CCDC171-202ENST00000432954 PPIDQ08752 370 aaKnown RBP12.26□□□□□ -0.45
CCDC171-202ENST00000432954 BCORL1Q5H9F3 1711 aa12.26□□□□□ -0.45
CCDC171-202ENST00000432954 PRPF40BQ6NWY9 871 aaKnown RBP12.26□□□□□ -0.45
CCDC171-202ENST00000432954 CYB5D1Q6P9G0 228 aa12.26□□□□□ -0.45
CCDC171-202ENST00000432954 DRC7Q8IY82 874 aa12.26□□□□□ -0.45
CCDC171-202ENST00000432954 THEMISQ8N1K5 641 aaPredicted RBP12.26□□□□□ -0.45
CCDC171-202ENST00000432954 SMC1BQ8NDV3 1235 aa12.26□□□□□ -0.45
CCDC171-202ENST00000432954 NSMCE1Q8WV22 266 aa12.26□□□□□ -0.45
CCDC171-202ENST00000432954 CENPTQ96BT3 561 aa12.26□□□□□ -0.45
CCDC171-202ENST00000432954 ZNF521Q96K83 1311 aa12.26□□□□□ -0.45
CCDC171-202ENST00000432954 GBP3Q9H0R5 595 aa12.26□□□□□ -0.45
CCDC171-202ENST00000432954 DDX21Q9NR30 783 aaKnown RBP eCLIP12.26□□□□□ -0.45
CCDC171-202ENST00000432954 KLHL42Q9P2K6 505 aa12.26□□□□□ -0.45
CCDC171-202ENST00000432954 DKK3Q9UBP4 350 aa12.26□□□□□ -0.45
CCDC171-202ENST00000432954 C15orf41Q9Y2V0 281 aa12.26□□□□□ -0.45
CCDC171-202ENST00000432954 RASSF10A6NK89 507 aa12.25□□□□□ -0.45
CCDC171-202ENST00000432954 SLC26A4O43511 780 aa12.25□□□□□ -0.45
CCDC171-202ENST00000432954 LDHAP00338 332 aaKnown RBP12.25□□□□□ -0.45
CCDC171-202ENST00000432954 WASHC5Q12768 1159 aa12.25□□□□□ -0.45
CCDC171-202ENST00000432954 BEND6Q5SZJ8 279 aaPredicted RBP12.25□□□□□ -0.45
CCDC171-202ENST00000432954 IQCEQ6IPM2 695 aa12.25□□□□□ -0.45
CCDC171-202ENST00000432954 PDILTQ8N807 584 aa12.25□□□□□ -0.45
CCDC171-202ENST00000432954 TEKT4Q8WW24 435 aa12.25□□□□□ -0.45
CCDC171-202ENST00000432954 ZCWPW1Q9H0M4 648 aa12.25□□□□□ -0.45
CCDC171-202ENST00000432954 ZNF304Q9HCX3 659 aa12.25□□□□□ -0.45
CCDC171-202ENST00000432954 GGA2Q9UJY4 613 aa12.25□□□□□ -0.45
CCDC171-202ENST00000432954 EFR3BQ9Y2G0 817 aa12.25□□□□□ -0.45
CCDC171-202ENST00000432954 NKTRP30414 1462 aaKnown RBP12.25□□□□□ -0.45
CCDC171-202ENST00000432954 CCDC194A0A1B0GVG4 234 aa12.25□□□□□ -0.45
CCDC171-202ENST00000432954 MGEA5O60502 916 aa12.25□□□□□ -0.45
CCDC171-202ENST00000432954 HSPA8P11142 646 aaKnown RBP12.25□□□□□ -0.45
CCDC171-202ENST00000432954 CTCFP49711 727 aaPredicted RBP12.25□□□□□ -0.45
CCDC171-202ENST00000432954 PI16Q6UXB8 463 aa12.25□□□□□ -0.45
CCDC171-202ENST00000432954 CRELD2Q6UXH1 353 aaPredicted RBP12.25□□□□□ -0.45
CCDC171-202ENST00000432954 CCDC121Q6ZUS5 278 aa12.25□□□□□ -0.45
CCDC171-202ENST00000432954 MAATS1Q7Z4T9 603 aa12.25□□□□□ -0.45
CCDC171-202ENST00000432954 ZNF804AQ7Z570 1209 aa12.25□□□□□ -0.45
CCDC171-202ENST00000432954 LUZP1Q86V48 1076 aa12.25□□□□□ -0.45
CCDC171-202ENST00000432954 WDR75Q8IWA0 830 aaKnown RBP12.25□□□□□ -0.45
CCDC171-202ENST00000432954 SAMD14Q8IZD0 417 aaPredicted RBP12.25□□□□□ -0.45
CCDC171-202ENST00000432954 STK11IPQ8N1F8 1099 aa12.25□□□□□ -0.45
CCDC171-202ENST00000432954 NR1H4Q96RI1 486 aaPredicted RBP12.25□□□□□ -0.45
CCDC171-202ENST00000432954 ACTR5Q9H9F9 607 aaPredicted RBP12.25□□□□□ -0.45
CCDC171-202ENST00000432954 SH3GLB1Q9Y371 365 aa12.25□□□□□ -0.45
CCDC171-202ENST00000432954 TCOF1Q13428 1488 aaKnown RBP12.24□□□□□ -0.45
CCDC171-202ENST00000432954 SH3TC1Q8TE82 1336 aa12.24□□□□□ -0.45
CCDC171-202ENST00000432954 GOLGA6L7A0A1B0GV03 622 aa12.24□□□□□ -0.45
CCDC171-202ENST00000432954 AKR1B10O60218 316 aa12.24□□□□□ -0.45
CCDC171-202ENST00000432954 IBSPP21815 317 aaPredicted RBP12.24□□□□□ -0.45
CCDC171-202ENST00000432954 MAP7Q14244 749 aa12.24□□□□□ -0.45
CCDC171-202ENST00000432954 WHAMMP3Q1A5X7 153 aa12.24□□□□□ -0.45
CCDC171-202ENST00000432954 CCDC82Q8N4S0 544 aa12.24□□□□□ -0.45
CCDC171-202ENST00000432954 TEX9Q8N6V9 391 aa12.24□□□□□ -0.45
CCDC171-202ENST00000432954 RASSF8Q8NHQ8 419 aa12.24□□□□□ -0.45
CCDC171-202ENST00000432954 TTC14Q96N46 770 aa12.24□□□□□ -0.45
CCDC171-202ENST00000432954 ANO10Q9NW15 660 aa12.24□□□□□ -0.45
CCDC171-202ENST00000432954 RTL1A6NKG5 1358 aa12.24□□□□□ -0.45
CCDC171-202ENST00000432954 PABPN1LA6NDY0 278 aaKnown RBP12.23□□□□□ -0.45
CCDC171-202ENST00000432954 POTEB2H3BUK9 544 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 N4BP1O75113 896 aaKnown RBP12.23□□□□□ -0.45
CCDC171-202ENST00000432954 AARSP49588 968 aaKnown RBP eCLIP12.23□□□□□ -0.45
CCDC171-202ENST00000432954 TUBA1BP68363 451 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 CCZ1BP86790 482 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 CCZ1P86791 482 aaPredicted RBP12.23□□□□□ -0.45
CCDC171-202ENST00000432954 SUZ12Q15022 739 aaKnown RBP12.23□□□□□ -0.45
CCDC171-202ENST00000432954 ADALQ6DHV7 355 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 POTEEQ6S8J3 1075 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 TUBA1AQ71U36 451 aa12.23□□□□□ -0.45
CCDC171-202ENST00000432954 FUKQ8N0W3 1084 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms