RNA–Protein interactions for RNA: ENST00000432561.6

CHFR-203, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHFR, Length 2,648 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-203ENST00000432561 SPATA31A5Q5VU36 1347 aa19.19■□□□□ 0.66
CHFR-203ENST00000432561 SPATA31A7Q8IWB4 1347 aa19.19■□□□□ 0.66
CHFR-203ENST00000432561 MAGEB6P1A0A0J9YX57 407 aa19.19■□□□□ 0.66
CHFR-203ENST00000432561 ERICH2A1L162 156 aa19.19■□□□□ 0.66
CHFR-203ENST00000432561 GNAT2P19087 354 aa19.19■□□□□ 0.66
CHFR-203ENST00000432561 GTF2F1P35269 517 aaKnown RBP eCLIP19.19■□□□□ 0.66
CHFR-203ENST00000432561 FAM98CQ17RN3 349 aaKnown RBP19.19■□□□□ 0.66
CHFR-203ENST00000432561 ZNF654Q8IZM8 581 aa19.19■□□□□ 0.66
CHFR-203ENST00000432561 ZNF384Q8TF68 577 aa19.19■□□□□ 0.66
CHFR-203ENST00000432561 ZNF592Q92610 1267 aa19.19■□□□□ 0.66
CHFR-203ENST00000432561 AHDC1Q5TGY3 1603 aaPredicted RBP19.18■□□□□ 0.66
CHFR-203ENST00000432561 CASZ1Q86V15 1759 aa19.18■□□□□ 0.66
CHFR-203ENST00000432561 PPP6R2O75170 966 aa19.18■□□□□ 0.66
CHFR-203ENST00000432561 MMP1P03956 469 aa19.18■□□□□ 0.66
CHFR-203ENST00000432561 CCZ1BP86790 482 aa19.18■□□□□ 0.66
CHFR-203ENST00000432561 CCZ1P86791 482 aaPredicted RBP19.18■□□□□ 0.66
CHFR-203ENST00000432561 SART3Q15020 963 aaKnown RBP19.18■□□□□ 0.66
CHFR-203ENST00000432561 UBAC1Q9BSL1 405 aa19.18■□□□□ 0.66
CHFR-203ENST00000432561 TNKSO95271 1327 aa19.18■□□□□ 0.66
CHFR-203ENST00000432561 GTF2E1P29083 439 aaPredicted RBP19.18■□□□□ 0.66
CHFR-203ENST00000432561 SLC51AQ86UW1 340 aa19.18■□□□□ 0.66
CHFR-203ENST00000432561 METTL16Q86W50 562 aaKnown RBP19.18■□□□□ 0.66
CHFR-203ENST00000432561 LAMB2P55268 1798 aa19.17■□□□□ 0.66
CHFR-203ENST00000432561 RESP18Q5W5W9 173 aa19.17■□□□□ 0.66
CHFR-203ENST00000432561 FOXP4Q8IVH2 680 aaPredicted RBP19.17■□□□□ 0.66
CHFR-203ENST00000432561 TRIM22Q8IYM9 498 aa19.17■□□□□ 0.66
CHFR-203ENST00000432561 SHISA4Q96DD7 197 aa19.17■□□□□ 0.66
CHFR-203ENST00000432561 ZNF652Q9Y2D9 606 aa19.17■□□□□ 0.66
CHFR-203ENST00000432561 THRAP3Q9Y2W1 955 aaKnown RBP19.17■□□□□ 0.66
CHFR-203ENST00000432561 RTL9Q8NET4 1388 aa19.17■□□□□ 0.66
CHFR-203ENST00000432561 FAM205CA6NFA0 338 aa19.17■□□□□ 0.66
CHFR-203ENST00000432561 SLC4A8Q2Y0W8 1093 aa19.17■□□□□ 0.66
CHFR-203ENST00000432561 HSP90AA4PQ58FG1 418 aa19.17■□□□□ 0.66
CHFR-203ENST00000432561 TBC1D9BQ66K14 1250 aa19.17■□□□□ 0.66
CHFR-203ENST00000432561 TMC6Q7Z403 805 aa19.17■□□□□ 0.66
CHFR-203ENST00000432561 CRACR2BQ8N4Y2 399 aaPredicted RBP19.17■□□□□ 0.66
CHFR-203ENST00000432561 JMYQ8N9B5 988 aa19.17■□□□□ 0.66
CHFR-203ENST00000432561 FANCBQ8NB91 859 aa19.17■□□□□ 0.66
CHFR-203ENST00000432561 RIOK1Q9BRS2 568 aaKnown RBP19.17■□□□□ 0.66
CHFR-203ENST00000432561 MINPP1Q9UNW1 487 aa19.17■□□□□ 0.66
CHFR-203ENST00000432561 PCDHB6Q9Y5E3 794 aa19.17■□□□□ 0.66
CHFR-203ENST00000432561 ZNF804BA4D1E1 1349 aa19.16■□□□□ 0.66
CHFR-203ENST00000432561 STK36Q9NRP7 1315 aa19.16■□□□□ 0.66
CHFR-203ENST00000432561 RREB1Q92766 1687 aa19.16■□□□□ 0.66
CHFR-203ENST00000432561 HSD3B7Q9H2F3 369 aa19.16■□□□□ 0.66
CHFR-203ENST00000432561 SRP68Q9UHB9 627 aaKnown RBP19.16■□□□□ 0.66
CHFR-203ENST00000432561 KCNH3Q9ULD8 1083 aa19.16■□□□□ 0.66
CHFR-203ENST00000432561 MYH13Q9UKX3 1938 aa19.16■□□□□ 0.66
CHFR-203ENST00000432561 CACNA1SQ13698 1873 aa19.16■□□□□ 0.66
CHFR-203ENST00000432561 RBM6P78332 1123 aaKnown RBP19.16■□□□□ 0.66
CHFR-203ENST00000432561 FAM84BQ96KN1 310 aaPredicted RBP19.16■□□□□ 0.66
CHFR-203ENST00000432561 TFCP2L1Q9NZI6 479 aa19.16■□□□□ 0.66
CHFR-203ENST00000432561 A0A1B0GUL6 1792 aa19.15■□□□□ 0.66
CHFR-203ENST00000432561 FAM182BQ5T319 152 aa19.15■□□□□ 0.66
CHFR-203ENST00000432561 GRAMD1CQ8IYS0 662 aa19.15■□□□□ 0.66
CHFR-203ENST00000432561 PDILTQ8N807 584 aa19.15■□□□□ 0.66
CHFR-203ENST00000432561 CNNM3Q8NE01 707 aa19.15■□□□□ 0.66
CHFR-203ENST00000432561 VPS54Q9P1Q0 977 aa19.15■□□□□ 0.66
CHFR-203ENST00000432561 NAA30Q147X3 362 aaPredicted RBP19.14■□□□□ 0.65
CHFR-203ENST00000432561 SAFBQ15424 915 aaKnown RBP eCLIP19.14■□□□□ 0.65
CHFR-203ENST00000432561 SEC23AQ15436 765 aa19.14■□□□□ 0.65
CHFR-203ENST00000432561 USP49Q70CQ1 688 aa19.14■□□□□ 0.65
CHFR-203ENST00000432561 ENAHQ8N8S7 591 aaPredicted RBP19.14■□□□□ 0.65
CHFR-203ENST00000432561 UBE2Q2Q8WVN8 375 aa19.14■□□□□ 0.65
CHFR-203ENST00000432561 DPF2Q92785 391 aa19.14■□□□□ 0.65
CHFR-203ENST00000432561 BPIFA3Q9BQP9 254 aa19.14■□□□□ 0.65
CHFR-203ENST00000432561 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.14■□□□□ 0.65
CHFR-203ENST00000432561 TUBE1Q9UJT0 475 aa19.14■□□□□ 0.65
CHFR-203ENST00000432561 PCDHA5Q9Y5H7 936 aa19.14■□□□□ 0.65
CHFR-203ENST00000432561 KRI1Q8N9T8 703 aaKnown RBP19.14■□□□□ 0.65
CHFR-203ENST00000432561 RNF41Q9H4P4 317 aaPredicted RBP19.14■□□□□ 0.65
CHFR-203ENST00000432561 CABP5Q9NP86 173 aa19.14■□□□□ 0.65
CHFR-203ENST00000432561 COL5A3P25940 1745 aaPredicted RBP19.14■□□□□ 0.65
CHFR-203ENST00000432561 NMT2O60551 498 aa19.13■□□□□ 0.65
CHFR-203ENST00000432561 CUTAO60888 179 aa19.13■□□□□ 0.65
CHFR-203ENST00000432561 PLEKHA8P1O95397 391 aa19.13■□□□□ 0.65
CHFR-203ENST00000432561 DEXIO95424 95 aa19.13■□□□□ 0.65
CHFR-203ENST00000432561 BMP6P22004 513 aa19.13■□□□□ 0.65
CHFR-203ENST00000432561 CAVIN4Q5BKX8 364 aa19.13■□□□□ 0.65
CHFR-203ENST00000432561 ARMCX5Q6P1M9 558 aa19.13■□□□□ 0.65
CHFR-203ENST00000432561 KRBA2Q6ZNG9 492 aa19.13■□□□□ 0.65
CHFR-203ENST00000432561 TIGD1Q96MW7 591 aa19.13■□□□□ 0.65
CHFR-203ENST00000432561 GNL3LQ9NVN8 582 aaKnown RBP19.13■□□□□ 0.65
CHFR-203ENST00000432561 BSDC1Q9NW68 430 aaPredicted RBP19.13■□□□□ 0.65
CHFR-203ENST00000432561 PDE4BQ07343 736 aa19.13■□□□□ 0.65
CHFR-203ENST00000432561 ZNF827Q17R98 1081 aa19.13■□□□□ 0.65
CHFR-203ENST00000432561 EARS2Q5JPH6 523 aaKnown RBP19.13■□□□□ 0.65
CHFR-203ENST00000432561 WASF1Q92558 559 aa19.13■□□□□ 0.65
CHFR-203ENST00000432561 ESR2Q92731 530 aa19.13■□□□□ 0.65
CHFR-203ENST00000432561 EP400Q96L91 3159 aa19.13■□□□□ 0.65
CHFR-203ENST00000432561 PRR29P0C7W0 189 aa19.12■□□□□ 0.65
CHFR-203ENST00000432561 FANCCQ00597 558 aa19.12■□□□□ 0.65
CHFR-203ENST00000432561 FBXO2Q9UK22 296 aaPredicted RBP19.12■□□□□ 0.65
CHFR-203ENST00000432561 POLR2DO15514 142 aaKnown RBP19.12■□□□□ 0.65
CHFR-203ENST00000432561 UBE4AQ14139 1066 aa19.12■□□□□ 0.65
CHFR-203ENST00000432561 SF3B3Q15393 1217 aaKnown RBP19.12■□□□□ 0.65
CHFR-203ENST00000432561 NOM1Q5C9Z4 860 aaKnown RBP19.12■□□□□ 0.65
CHFR-203ENST00000432561 AMIGO3Q86WK7 504 aa19.12■□□□□ 0.65
CHFR-203ENST00000432561 AATFQ9NY61 560 aaKnown RBP eCLIP19.12■□□□□ 0.65
CHFR-203ENST00000432561 NID2Q14112 1375 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms