RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 CCDC85BQ15834 202 aaPredicted RBP8.62□□□□□ -1.03
PTPN4-204ENST00000431283 EAPPQ56P03 285 aaPredicted RBP8.62□□□□□ -1.03
PTPN4-204ENST00000431283 TTBK2Q6IQ55 1244 aa8.62□□□□□ -1.03
PTPN4-204ENST00000431283 AEBP1Q8IUX7 1158 aa8.62□□□□□ -1.03
PTPN4-204ENST00000431283 PI4K2BQ8TCG2 481 aa8.62□□□□□ -1.03
PTPN4-204ENST00000431283 KRTAP4-12Q9BQ66 201 aa8.62□□□□□ -1.03
PTPN4-204ENST00000431283 CD8BP10966 210 aa8.61□□□□□ -1.03
PTPN4-204ENST00000431283 ANGEL2Q5VTE6 544 aaKnown RBP8.61□□□□□ -1.03
PTPN4-204ENST00000431283 DIEXFQ68CQ4 756 aaKnown RBP8.61□□□□□ -1.03
PTPN4-204ENST00000431283 PDIA4P13667 645 aaKnown RBP8.6□□□□□ -1.03
PTPN4-204ENST00000431283 ITGB5P18084 799 aa8.6□□□□□ -1.03
PTPN4-204ENST00000431283 FUT4P22083 530 aa8.6□□□□□ -1.03
PTPN4-204ENST00000431283 ETF1P62495 437 aaKnown RBP8.6□□□□□ -1.03
PTPN4-204ENST00000431283 COL19A1Q14993 1142 aa8.6□□□□□ -1.03
PTPN4-204ENST00000431283 ARMCX6Q7L4S7 300 aa8.6□□□□□ -1.03
PTPN4-204ENST00000431283 ASB11Q8WXH4 323 aa8.6□□□□□ -1.03
PTPN4-204ENST00000431283 RC3H2Q9HBD1 1191 aaKnown RBP8.6□□□□□ -1.03
PTPN4-204ENST00000431283 PRDM5Q9NQX1 630 aaPredicted RBP8.6□□□□□ -1.03
PTPN4-204ENST00000431283 SNX11Q9Y5W9 270 aa8.6□□□□□ -1.03
PTPN4-204ENST00000431283 ANKRD33BA6NCL7 494 aa8.59□□□□□ -1.03
PTPN4-204ENST00000431283 IGF2BP3O00425 579 aaKnown RBP eCLIP8.59□□□□□ -1.03
PTPN4-204ENST00000431283 LRIG2O94898 1065 aa8.59□□□□□ -1.03
PTPN4-204ENST00000431283 RING1Q06587 406 aa8.59□□□□□ -1.03
PTPN4-204ENST00000431283 RASIP1Q5U651 963 aa8.59□□□□□ -1.03
PTPN4-204ENST00000431283 PLPPR2Q96GM1 343 aa8.59□□□□□ -1.03
PTPN4-204ENST00000431283 SNCAIPQ9Y6H5 919 aa8.59□□□□□ -1.03
PTPN4-204ENST00000431283 NTF4P34130 210 aa8.58□□□□□ -1.04
PTPN4-204ENST00000431283 IKZF1Q13422 519 aa8.58□□□□□ -1.04
PTPN4-204ENST00000431283 INPP5AQ14642 412 aa8.58□□□□□ -1.04
PTPN4-204ENST00000431283 WIPI1Q5MNZ9 446 aaPredicted RBP8.58□□□□□ -1.04
PTPN4-204ENST00000431283 LCE3BQ5TA77 95 aa8.58□□□□□ -1.04
PTPN4-204ENST00000431283 LRFN4Q6PJG9 635 aa8.58□□□□□ -1.04
PTPN4-204ENST00000431283 SND1Q7KZF4 910 aaKnown RBP eCLIP8.58□□□□□ -1.04
PTPN4-204ENST00000431283 HEXIM2Q96MH2 286 aaKnown RBP8.58□□□□□ -1.04
PTPN4-204ENST00000431283 DUSP9Q99956 384 aaKnown RBP8.58□□□□□ -1.04
PTPN4-204ENST00000431283 TPX2Q9ULW0 747 aaKnown RBP8.58□□□□□ -1.04
PTPN4-204ENST00000431283 AK5Q9Y6K8 562 aa8.58□□□□□ -1.04
PTPN4-204ENST00000431283 U3KQE9 123 aa8.58□□□□□ -1.04
PTPN4-204ENST00000431283 CD96P40200 585 aa8.57□□□□□ -1.04
PTPN4-204ENST00000431283 RPS26P62854 115 aaKnown RBP8.57□□□□□ -1.04
PTPN4-204ENST00000431283 UBE3DQ7Z6J8 389 aa8.57□□□□□ -1.04
PTPN4-204ENST00000431283 FOXQ1Q9C009 403 aa8.57□□□□□ -1.04
PTPN4-204ENST00000431283 PLAGL2Q9UPG8 496 aa8.57□□□□□ -1.04
PTPN4-204ENST00000431283 FAM155AB1AL88 458 aaPredicted RBP8.56□□□□□ -1.04
PTPN4-204ENST00000431283 CYFIP1Q7L576 1253 aa8.56□□□□□ -1.04
PTPN4-204ENST00000431283 HID1Q8IV36 788 aa8.56□□□□□ -1.04
PTPN4-204ENST00000431283 WNT10AQ9GZT5 417 aa8.56□□□□□ -1.04
PTPN4-204ENST00000431283 TNKS2Q9H2K2 1166 aa8.56□□□□□ -1.04
PTPN4-204ENST00000431283 MAPK8IP1Q9UQF2 711 aa8.56□□□□□ -1.04
PTPN4-204ENST00000431283 RLBP1P12271 317 aa8.55□□□□□ -1.04
PTPN4-204ENST00000431283 CLCN7P51798 805 aa8.55□□□□□ -1.04
PTPN4-204ENST00000431283 PTPN11Q06124 597 aaPredicted RBP8.55□□□□□ -1.04
PTPN4-204ENST00000431283 PSMD2Q13200 908 aa8.55□□□□□ -1.04
PTPN4-204ENST00000431283 MAP3K11Q16584 847 aa8.55□□□□□ -1.04
PTPN4-204ENST00000431283 ZNF746Q6NUN9 644 aaPredicted RBP8.55□□□□□ -1.04
PTPN4-204ENST00000431283 ATG4DQ86TL0 474 aaPredicted RBP8.55□□□□□ -1.04
PTPN4-204ENST00000431283 KRTAP1-3Q8IUG1 177 aa8.55□□□□□ -1.04
PTPN4-204ENST00000431283 MFSD2AQ8NA29 543 aa8.55□□□□□ -1.04
PTPN4-204ENST00000431283 MIPEPQ99797 713 aa8.55□□□□□ -1.04
PTPN4-204ENST00000431283 MIR1-1HGQ9H1L0 117 aa8.55□□□□□ -1.04
PTPN4-204ENST00000431283 RNASE1P07998 156 aaKnown RBP8.54□□□□□ -1.04
PTPN4-204ENST00000431283 XPCQ01831 940 aaPredicted RBP8.54□□□□□ -1.04
PTPN4-204ENST00000431283 OGFOD2Q6N063 350 aa8.54□□□□□ -1.04
PTPN4-204ENST00000431283 SLC23A3Q6PIS1 610 aa8.54□□□□□ -1.04
PTPN4-204ENST00000431283 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.54□□□□□ -1.04
PTPN4-204ENST00000431283 WFDC3Q8IUB2 231 aa8.54□□□□□ -1.04
PTPN4-204ENST00000431283 GAL3ST3Q96A11 431 aa8.54□□□□□ -1.04
PTPN4-204ENST00000431283 MBNL3Q9NUK0 354 aaKnown RBP8.54□□□□□ -1.04
PTPN4-204ENST00000431283 BTBD11A6QL63 1104 aa8.53□□□□□ -1.04
PTPN4-204ENST00000431283 PAPLNO95428 1278 aa8.53□□□□□ -1.04
PTPN4-204ENST00000431283 EOMESO95936 686 aa8.53□□□□□ -1.04
PTPN4-204ENST00000431283 ZP2Q05996 745 aa8.53□□□□□ -1.04
PTPN4-204ENST00000431283 SFRP5Q5T4F7 317 aa8.53□□□□□ -1.04
PTPN4-204ENST00000431283 FAM214BQ7L5A3 538 aa8.53□□□□□ -1.04
PTPN4-204ENST00000431283 SPACA3Q8IXA5 215 aa8.53□□□□□ -1.04
PTPN4-204ENST00000431283 CYP7A1P22680 504 aa8.52□□□□□ -1.05
PTPN4-204ENST00000431283 GRK4P32298 578 aa8.52□□□□□ -1.05
PTPN4-204ENST00000431283 LIG3P49916 1009 aa8.52□□□□□ -1.05
PTPN4-204ENST00000431283 SEPT6Q14141 434 aa8.52□□□□□ -1.05
PTPN4-204ENST00000431283 KRTAP19-1Q8IUB9 90 aa8.52□□□□□ -1.05
PTPN4-204ENST00000431283 LRRN4CLQ8ND94 238 aa8.52□□□□□ -1.05
PTPN4-204ENST00000431283 FBRSQ9HAH7 460 aa8.52□□□□□ -1.05
PTPN4-204ENST00000431283 PARP2Q9UGN5 583 aa8.52□□□□□ -1.05
PTPN4-204ENST00000431283 ADAMTS6Q9UKP5 1117 aa8.52□□□□□ -1.05
PTPN4-204ENST00000431283 SLITRK5O94991 958 aa8.51□□□□□ -1.05
PTPN4-204ENST00000431283 CAP2P40123 477 aa8.51□□□□□ -1.05
PTPN4-204ENST00000431283 SLBPQ14493 270 aaKnown RBP eCLIP8.51□□□□□ -1.05
PTPN4-204ENST00000431283 NKPD1Q17RQ9 610 aa8.51□□□□□ -1.05
PTPN4-204ENST00000431283 LETMD1Q6P1Q0 360 aa8.51□□□□□ -1.05
PTPN4-204ENST00000431283 AGMOQ6ZNB7 445 aa8.51□□□□□ -1.05
PTPN4-204ENST00000431283 MFSD4AQ8N468 514 aa8.51□□□□□ -1.05
PTPN4-204ENST00000431283 FAM168AQ92567 244 aa8.51□□□□□ -1.05
PTPN4-204ENST00000431283 PCDHB5Q9Y5E4 795 aa8.51□□□□□ -1.05
PTPN4-204ENST00000431283 ITGAEP38570 1179 aa8.5□□□□□ -1.05
PTPN4-204ENST00000431283 PDE4BQ07343 736 aa8.5□□□□□ -1.05
PTPN4-204ENST00000431283 NKG7Q16617 165 aa8.5□□□□□ -1.05
PTPN4-204ENST00000431283 TSNAXIP1Q2TAA8 658 aa8.5□□□□□ -1.05
PTPN4-204ENST00000431283 CDKAL1Q5VV42 579 aa8.5□□□□□ -1.05
PTPN4-204ENST00000431283 XAGE3Q8WTP9 111 aa8.5□□□□□ -1.05
PTPN4-204ENST00000431283 TACC3Q9Y6A5 838 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms