RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	BIN2	Q9UBW5	565 aa	Predicted RBP	21.75	■■□□□ 1.07
MRPL28-203	ENST00000429738	COL2A1	P02458	1487 aa	Predicted RBP	21.75	■■□□□ 1.07
MRPL28-203	ENST00000429738	IGSF3	O75054	1194 aa		21.74	■■□□□ 1.07
MRPL28-203	ENST00000429738	CYP2E1	P05181	493 aa	Predicted RBP	21.74	■■□□□ 1.07
MRPL28-203	ENST00000429738	FCGRT	P55899	365 aa		21.74	■■□□□ 1.07
MRPL28-203	ENST00000429738	HTATIP2	Q9BUP3	242 aa		21.74	■■□□□ 1.07
MRPL28-203	ENST00000429738	SNRK	Q9NRH2	765 aa		21.74	■■□□□ 1.07
MRPL28-203	ENST00000429738	TLR7	Q9NYK1	1049 aa	Known RBP	21.74	■■□□□ 1.07
MRPL28-203	ENST00000429738	LRP2BP	Q9P2M1	347 aa		21.74	■■□□□ 1.07
MRPL28-203	ENST00000429738	DOCK1	Q14185	1865 aa		21.74	■■□□□ 1.07
MRPL28-203	ENST00000429738	PHIP	Q8WWQ0	1821 aa		21.73	■■□□□ 1.07
MRPL28-203	ENST00000429738	CDK5RAP2	Q96SN8	1893 aa		21.73	■■□□□ 1.07
MRPL28-203	ENST00000429738	RANBP2	P49792	3224 aa	Known RBP	21.73	■■□□□ 1.07
MRPL28-203	ENST00000429738	PTPRF	P10586	1907 aa		21.73	■■□□□ 1.07
MRPL28-203	ENST00000429738	PRKCZ	Q05513	592 aa		21.73	■■□□□ 1.07
MRPL28-203	ENST00000429738	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	21.73	■■□□□ 1.07
MRPL28-203	ENST00000429738	RBM27	Q9P2N5	1060 aa	Known RBP	21.73	■■□□□ 1.07
MRPL28-203	ENST00000429738	FOCAD	Q5VW36	1801 aa		21.72	■■□□□ 1.07
MRPL28-203	ENST00000429738	TBC1D12	O60347	775 aa		21.72	■■□□□ 1.07
MRPL28-203	ENST00000429738	SLURP2	P0DP57	97 aa		21.72	■■□□□ 1.07
MRPL28-203	ENST00000429738	CYP2C8	P10632	490 aa		21.72	■■□□□ 1.07
MRPL28-203	ENST00000429738	FASTKD5	Q7L8L6	764 aa	Known RBP	21.72	■■□□□ 1.07
MRPL28-203	ENST00000429738	SCYL3	Q8IZE3	742 aa		21.72	■■□□□ 1.07
MRPL28-203	ENST00000429738	CCDC8	Q9H0W5	538 aa	Predicted RBP	21.72	■■□□□ 1.07
MRPL28-203	ENST00000429738	EXOC6B	Q9Y2D4	811 aa		21.72	■■□□□ 1.07
MRPL28-203	ENST00000429738	ZAP70	P43403	619 aa		21.71	■■□□□ 1.07
MRPL28-203	ENST00000429738	ERC1	Q8IUD2	1116 aa		21.71	■■□□□ 1.07
MRPL28-203	ENST00000429738	SLAIN1	Q8ND83	568 aa		21.71	■■□□□ 1.07
MRPL28-203	ENST00000429738	OSBPL5	Q9H0X9	879 aa	Predicted RBP	21.71	■■□□□ 1.07
MRPL28-203	ENST00000429738	RCAN3	Q9UKA8	241 aa		21.71	■■□□□ 1.07
MRPL28-203	ENST00000429738	DDX19B	Q9UMR2	479 aa		21.71	■■□□□ 1.07
MRPL28-203	ENST00000429738	NR2E3	Q9Y5X4	410 aa		21.71	■■□□□ 1.07
MRPL28-203	ENST00000429738	ZHX2	Q9Y6X8	837 aa		21.71	■■□□□ 1.07
MRPL28-203	ENST00000429738		A0A0G2JLL6	359 aa	Predicted RBP	21.7	■■□□□ 1.06
MRPL28-203	ENST00000429738	CTNND1	O60716	968 aa	Known RBP	21.7	■■□□□ 1.06
MRPL28-203	ENST00000429738	PTPRA	P18433	802 aa		21.7	■■□□□ 1.06
MRPL28-203	ENST00000429738	PPP4C	P60510	307 aa		21.7	■■□□□ 1.06
MRPL28-203	ENST00000429738	NAA16	Q6N069	864 aa	Predicted RBP	21.7	■■□□□ 1.06
MRPL28-203	ENST00000429738	PRRT2	Q7Z6L0	340 aa	Predicted RBP	21.7	■■□□□ 1.06
MRPL28-203	ENST00000429738	U2AF1L4	Q8WU68	220 aa	Known RBP	21.7	■■□□□ 1.06
MRPL28-203	ENST00000429738	PICK1	Q9NRD5	415 aa		21.7	■■□□□ 1.06
MRPL28-203	ENST00000429738	ZBTB40	Q9NUA8	1239 aa		21.7	■■□□□ 1.06
MRPL28-203	ENST00000429738	GABRQ	Q9UN88	632 aa		21.7	■■□□□ 1.06
MRPL28-203	ENST00000429738	COG6	Q9Y2V7	657 aa		21.7	■■□□□ 1.06
MRPL28-203	ENST00000429738	SIPA1L1	O43166	1804 aa		21.7	■■□□□ 1.06
MRPL28-203	ENST00000429738	MGAM	O43451	1857 aa		21.69	■■□□□ 1.06
MRPL28-203	ENST00000429738	ADGRA1	Q86SQ6	560 aa		21.69	■■□□□ 1.06
MRPL28-203	ENST00000429738	RPAP2	Q8IXW5	612 aa	Predicted RBP	21.69	■■□□□ 1.06
MRPL28-203	ENST00000429738	UNC93B1	Q9H1C4	597 aa		21.69	■■□□□ 1.06
MRPL28-203	ENST00000429738	PRO3102	Q9H379	93 aa		21.69	■■□□□ 1.06
MRPL28-203	ENST00000429738	PIH1D3	Q9NQM4	214 aa	Known RBP	21.69	■■□□□ 1.06
MRPL28-203	ENST00000429738	SLC45A1	Q9Y2W3	748 aa		21.69	■■□□□ 1.06
MRPL28-203	ENST00000429738	AFG3L2	Q9Y4W6	797 aa		21.69	■■□□□ 1.06
MRPL28-203	ENST00000429738	ADCY3	O60266	1144 aa		21.68	■■□□□ 1.06
MRPL28-203	ENST00000429738	SGPL1	O95470	568 aa		21.68	■■□□□ 1.06
MRPL28-203	ENST00000429738	HSP90AB4P	Q58FF6	505 aa		21.68	■■□□□ 1.06
MRPL28-203	ENST00000429738	SIRT2	Q8IXJ6	389 aa		21.68	■■□□□ 1.06
MRPL28-203	ENST00000429738	TEX11	Q8IYF3	940 aa		21.68	■■□□□ 1.06
MRPL28-203	ENST00000429738	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	21.68	■■□□□ 1.06
MRPL28-203	ENST00000429738	AATF	Q9NY61	560 aa	Known RBP eCLIP	21.68	■■□□□ 1.06
MRPL28-203	ENST00000429738	ATAD5	Q96QE3	1844 aa		21.68	■■□□□ 1.06
MRPL28-203	ENST00000429738	FARP2	O94887	1054 aa	Predicted RBP	21.67	■■□□□ 1.06
MRPL28-203	ENST00000429738	BAG3	O95817	575 aa		21.67	■■□□□ 1.06
MRPL28-203	ENST00000429738	PLCG2	P16885	1265 aa		21.67	■■□□□ 1.06
MRPL28-203	ENST00000429738	CAPN2	P17655	700 aa		21.67	■■□□□ 1.06
MRPL28-203	ENST00000429738	FLT3LG	P49771	235 aa		21.67	■■□□□ 1.06
MRPL28-203	ENST00000429738	RHPN1	Q8TCX5	695 aa		21.67	■■□□□ 1.06
MRPL28-203	ENST00000429738	PXYLP1	Q8TE99	480 aa		21.67	■■□□□ 1.06
MRPL28-203	ENST00000429738	NOL10	Q9BSC4	688 aa	Known RBP	21.67	■■□□□ 1.06
MRPL28-203	ENST00000429738	GADL1	Q6ZQY3	521 aa		21.66	■■□□□ 1.06
MRPL28-203	ENST00000429738	AACS	Q86V21	672 aa		21.66	■■□□□ 1.06
MRPL28-203	ENST00000429738	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	21.66	■■□□□ 1.06
MRPL28-203	ENST00000429738	FAM196B	A6NMK8	535 aa		21.65	■■□□□ 1.06
MRPL28-203	ENST00000429738	IRF5	Q13568	498 aa		21.65	■■□□□ 1.06
MRPL28-203	ENST00000429738	DOCK3	Q8IZD9	2030 aa		21.65	■■□□□ 1.06
MRPL28-203	ENST00000429738	DHX36	Q9H2U1	1008 aa	Known RBP	21.64	■■□□□ 1.05
MRPL28-203	ENST00000429738	CHMP4B	Q9H444	224 aa	Known RBP	21.64	■■□□□ 1.05
MRPL28-203	ENST00000429738	IL1RAPL2	Q9NP60	686 aa		21.64	■■□□□ 1.05
MRPL28-203	ENST00000429738	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	21.64	■■□□□ 1.05
MRPL28-203	ENST00000429738	HERC5	Q9UII4	1024 aa	Known RBP	21.64	■■□□□ 1.05
MRPL28-203	ENST00000429738	FLT1	P17948	1338 aa		21.63	■■□□□ 1.05
MRPL28-203	ENST00000429738	TNPO2	O14787	897 aa	Known RBP	21.63	■■□□□ 1.05
MRPL28-203	ENST00000429738	HMMR	O75330	724 aa		21.63	■■□□□ 1.05
MRPL28-203	ENST00000429738	TFRC	P02786	760 aa	Known RBP	21.63	■■□□□ 1.05
MRPL28-203	ENST00000429738	INHA	P05111	366 aa		21.63	■■□□□ 1.05
MRPL28-203	ENST00000429738	ELN	P15502	786 aa		21.63	■■□□□ 1.05
MRPL28-203	ENST00000429738	PDE3A	Q14432	1141 aa		21.63	■■□□□ 1.05
MRPL28-203	ENST00000429738	RRP1B	Q14684	758 aa	Known RBP	21.63	■■□□□ 1.05
MRPL28-203	ENST00000429738	SMCR8	Q8TEV9	937 aa	Predicted RBP	21.63	■■□□□ 1.05
MRPL28-203	ENST00000429738	TGFBRAP1	Q8WUH2	860 aa		21.63	■■□□□ 1.05
MRPL28-203	ENST00000429738	KIF1BP	Q96EK5	621 aa		21.63	■■□□□ 1.05
MRPL28-203	ENST00000429738	ANTXR1	Q9H6X2	564 aa		21.63	■■□□□ 1.05
MRPL28-203	ENST00000429738	PI4KB	Q9UBF8	816 aa		21.63	■■□□□ 1.05
MRPL28-203	ENST00000429738	NDUFB9	Q9Y6M9	179 aa		21.63	■■□□□ 1.05
MRPL28-203	ENST00000429738	C20orf194	Q5TEA3	1177 aa		21.62	■■□□□ 1.05
MRPL28-203	ENST00000429738	TMED8	Q6PL24	325 aa	Predicted RBP	21.62	■■□□□ 1.05
MRPL28-203	ENST00000429738	METTL16	Q86W50	562 aa	Known RBP	21.62	■■□□□ 1.05
MRPL28-203	ENST00000429738	DEFB118	Q96PH6	123 aa		21.62	■■□□□ 1.05
MRPL28-203	ENST00000429738	MYH1	P12882	1939 aa		21.61	■■□□□ 1.05
MRPL28-203	ENST00000429738		A0A1W2PPC1	479 aa		21.61	■■□□□ 1.05

Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms