RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 ASTN2O75129 1339 aaPredicted RBP20.24■□□□□ 0.83
LINC00887-203ENST00000429578 TNNI2P48788 182 aa20.24■□□□□ 0.83
LINC00887-203ENST00000429578 SLC4A8Q2Y0W8 1093 aa20.24■□□□□ 0.83
LINC00887-203ENST00000429578 STOX1Q6ZVD7 989 aa20.24■□□□□ 0.83
LINC00887-203ENST00000429578 TBC1D10CQ8IV04 446 aa20.24■□□□□ 0.83
LINC00887-203ENST00000429578 SMIM22K7EJ46 135 aa20.23■□□□□ 0.83
LINC00887-203ENST00000429578 SLC3A2P08195 630 aaKnown RBP20.23■□□□□ 0.83
LINC00887-203ENST00000429578 EVX2Q03828 476 aa20.23■□□□□ 0.83
LINC00887-203ENST00000429578 AKNAD1Q5T1N1 836 aa20.23■□□□□ 0.83
LINC00887-203ENST00000429578 ANGEL2Q5VTE6 544 aaKnown RBP20.23■□□□□ 0.83
LINC00887-203ENST00000429578 STAG1Q8WVM7 1258 aa20.23■□□□□ 0.83
LINC00887-203ENST00000429578 TM6SF1Q9BZW5 370 aa20.23■□□□□ 0.83
LINC00887-203ENST00000429578 PASKQ96RG2 1323 aa20.23■□□□□ 0.83
LINC00887-203ENST00000429578 ITGBL1O95965 494 aaPredicted RBP20.22■□□□□ 0.83
LINC00887-203ENST00000429578 HLA-DOAP06340 250 aa20.22■□□□□ 0.83
LINC00887-203ENST00000429578 PCP11498 1178 aaKnown RBP20.22■□□□□ 0.83
LINC00887-203ENST00000429578 PSMA5P28066 241 aa20.22■□□□□ 0.83
LINC00887-203ENST00000429578 MAP1SQ66K74 1059 aaPredicted RBP20.22■□□□□ 0.83
LINC00887-203ENST00000429578 MFSD6Q6ZSS7 791 aa20.22■□□□□ 0.83
LINC00887-203ENST00000429578 SH3BP5LQ7L8J4 393 aa20.22■□□□□ 0.83
LINC00887-203ENST00000429578 APOBEC3FQ8IUX4 373 aaKnown RBP20.22■□□□□ 0.83
LINC00887-203ENST00000429578 ZSCAN29Q8IWY8 852 aaPredicted RBP20.22■□□□□ 0.83
LINC00887-203ENST00000429578 RNF41Q9H4P4 317 aaPredicted RBP20.22■□□□□ 0.83
LINC00887-203ENST00000429578 PITPNM2Q9BZ72 1349 aa20.22■□□□□ 0.83
LINC00887-203ENST00000429578 DDTLA6NHG4 134 aaPredicted RBP20.22■□□□□ 0.83
LINC00887-203ENST00000429578 FGRP09769 529 aa20.22■□□□□ 0.83
LINC00887-203ENST00000429578 JAKMIP1Q96N16 626 aaKnown RBP20.22■□□□□ 0.83
LINC00887-203ENST00000429578 NEK1Q96PY6 1258 aa20.22■□□□□ 0.83
LINC00887-203ENST00000429578 GGA3Q9NZ52 723 aa20.22■□□□□ 0.83
LINC00887-203ENST00000429578 PI4KBQ9UBF8 816 aa20.22■□□□□ 0.83
LINC00887-203ENST00000429578 RABEP1Q15276 862 aa20.21■□□□□ 0.83
LINC00887-203ENST00000429578 EHD4Q9H223 541 aa20.21■□□□□ 0.83
LINC00887-203ENST00000429578 CNNM2Q9H8M5 875 aa20.21■□□□□ 0.83
LINC00887-203ENST00000429578 CASTP20810 708 aaKnown RBP20.2■□□□□ 0.82
LINC00887-203ENST00000429578 PDE4BQ07343 736 aa20.2■□□□□ 0.82
LINC00887-203ENST00000429578 TRDNQ13061 729 aa20.2■□□□□ 0.82
LINC00887-203ENST00000429578 RASA3Q14644 834 aa20.2■□□□□ 0.82
LINC00887-203ENST00000429578 STK11IPQ8N1F8 1099 aa20.2■□□□□ 0.82
LINC00887-203ENST00000429578 NCOA7Q8NI08 942 aa20.2■□□□□ 0.82
LINC00887-203ENST00000429578 ZC3H15Q8WU90 426 aaKnown RBP20.2■□□□□ 0.82
LINC00887-203ENST00000429578 TMEM39BQ9GZU3 492 aa20.2■□□□□ 0.82
LINC00887-203ENST00000429578 ZSWIM6Q9HCJ5 1215 aa20.2■□□□□ 0.82
LINC00887-203ENST00000429578 SERPINB13Q9UIV8 391 aa20.2■□□□□ 0.82
LINC00887-203ENST00000429578 TACC3Q9Y6A5 838 aa20.2■□□□□ 0.82
LINC00887-203ENST00000429578 HMGB1P09429 215 aaKnown RBP20.19■□□□□ 0.82
LINC00887-203ENST00000429578 GABPAQ06546 454 aa20.19■□□□□ 0.82
LINC00887-203ENST00000429578 C16orf86Q6ZW13 317 aa20.19■□□□□ 0.82
LINC00887-203ENST00000429578 DYNLL2Q96FJ2 89 aa20.19■□□□□ 0.82
LINC00887-203ENST00000429578 KRT23Q9C075 422 aa20.19■□□□□ 0.82
LINC00887-203ENST00000429578 DEFB129Q9H1M3 183 aa20.19■□□□□ 0.82
LINC00887-203ENST00000429578 INCENPQ9NQS7 918 aa20.19■□□□□ 0.82
LINC00887-203ENST00000429578 TAOK2Q9UL54 1235 aa20.19■□□□□ 0.82
LINC00887-203ENST00000429578 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.19■□□□□ 0.82
LINC00887-203ENST00000429578 NEDD4P46934 1319 aa20.19■□□□□ 0.82
LINC00887-203ENST00000429578 TMEM88BA6NKF7 163 aa20.19■□□□□ 0.82
LINC00887-203ENST00000429578 BLOC1S2Q6QNY1 142 aa20.19■□□□□ 0.82
LINC00887-203ENST00000429578 RALYLQ86SE5 291 aaKnown RBP20.19■□□□□ 0.82
LINC00887-203ENST00000429578 FOXP4Q8IVH2 680 aaPredicted RBP20.19■□□□□ 0.82
LINC00887-203ENST00000429578 CSRNP1Q96S65 589 aa20.19■□□□□ 0.82
LINC00887-203ENST00000429578 ZNF287Q9HBT7 754 aa20.19■□□□□ 0.82
LINC00887-203ENST00000429578 PGAP2Q9UHJ9 254 aa20.19■□□□□ 0.82
LINC00887-203ENST00000429578 SCAF8Q9UPN6 1271 aaKnown RBP20.19■□□□□ 0.82
LINC00887-203ENST00000429578 RBM19Q9Y4C8 960 aaKnown RBP20.19■□□□□ 0.82
LINC00887-203ENST00000429578 ORC4O43929 436 aa20.18■□□□□ 0.82
LINC00887-203ENST00000429578 RUFY3Q7L099 469 aa20.18■□□□□ 0.82
LINC00887-203ENST00000429578 IL27Q8NEV9 243 aa20.18■□□□□ 0.82
LINC00887-203ENST00000429578 DCPSQ96C86 337 aaKnown RBP20.18■□□□□ 0.82
LINC00887-203ENST00000429578 UPF3BQ9BZI7 483 aaKnown RBP20.18■□□□□ 0.82
LINC00887-203ENST00000429578 PPP2R3BQ9Y5P8 575 aa20.18■□□□□ 0.82
LINC00887-203ENST00000429578 PCNTO95613 3336 aa20.18■□□□□ 0.82
LINC00887-203ENST00000429578 NT5C2P49902 561 aa20.17■□□□□ 0.82
LINC00887-203ENST00000429578 METTL16Q86W50 562 aaKnown RBP20.17■□□□□ 0.82
LINC00887-203ENST00000429578 TEPSINQ96N21 525 aa20.17■□□□□ 0.82
LINC00887-203ENST00000429578 TOMM22Q9NS69 142 aa20.17■□□□□ 0.82
LINC00887-203ENST00000429578 SWAP70Q9UH65 585 aa20.17■□□□□ 0.82
LINC00887-203ENST00000429578 CYP46A1Q9Y6A2 500 aa20.17■□□□□ 0.82
LINC00887-203ENST00000429578 B4E1Z4 1266 aa20.16■□□□□ 0.82
LINC00887-203ENST00000429578 CDK8P49336 464 aa20.16■□□□□ 0.82
LINC00887-203ENST00000429578 NEK4P51957 841 aa20.16■□□□□ 0.82
LINC00887-203ENST00000429578 COL9A3Q14050 684 aaPredicted RBP20.16■□□□□ 0.82
LINC00887-203ENST00000429578 RRP12Q5JTH9 1297 aaKnown RBP20.16■□□□□ 0.82
LINC00887-203ENST00000429578 MB21D2Q8IYB1 491 aaPredicted RBP20.16■□□□□ 0.82
LINC00887-203ENST00000429578 CRACR2BQ8N4Y2 399 aaPredicted RBP20.16■□□□□ 0.82
LINC00887-203ENST00000429578 SLC44A5Q8NCS7 719 aa20.16■□□□□ 0.82
LINC00887-203ENST00000429578 MKNK2Q9HBH9 465 aa20.16■□□□□ 0.82
LINC00887-203ENST00000429578 ATAD5Q96QE3 1844 aa20.16■□□□□ 0.82
LINC00887-203ENST00000429578 PRDM1O75626 825 aa20.16■□□□□ 0.82
LINC00887-203ENST00000429578 CPA1P15085 419 aa20.16■□□□□ 0.82
LINC00887-203ENST00000429578 RPS6KB1P23443 525 aa20.16■□□□□ 0.82
LINC00887-203ENST00000429578 DHX32Q7L7V1 743 aaKnown RBP20.16■□□□□ 0.82
LINC00887-203ENST00000429578 CDAN1Q8IWY9 1227 aa20.16■□□□□ 0.82
LINC00887-203ENST00000429578 ESR2Q92731 530 aa20.16■□□□□ 0.82
LINC00887-203ENST00000429578 HERC5Q9UII4 1024 aaKnown RBP20.16■□□□□ 0.82
LINC00887-203ENST00000429578 GREB1LQ9C091 1923 aaPredicted RBP20.15■□□□□ 0.82
LINC00887-203ENST00000429578 KDM4AO75164 1064 aa20.15■□□□□ 0.82
LINC00887-203ENST00000429578 MCM5P33992 734 aa20.15■□□□□ 0.82
LINC00887-203ENST00000429578 SULF1Q8IWU6 871 aa20.15■□□□□ 0.82
LINC00887-203ENST00000429578 TRIM34Q9BYJ4 488 aa20.15■□□□□ 0.82
LINC00887-203ENST00000429578 EXOSC10Q01780 885 aaKnown RBP20.14■□□□□ 0.81
LINC00887-203ENST00000429578 NKX2-3Q8TAU0 364 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 178.6 ms