RNA–Protein interactions for RNA: ENST00000429456.1

LINC01238-203, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 2,170 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-203ENST00000429456 CFAP100Q494V2 611 aa13.21□□□□□ -0.29
LINC01238-203ENST00000429456 MFSD6Q6ZSS7 791 aa13.21□□□□□ -0.29
LINC01238-203ENST00000429456 STAG1Q8WVM7 1258 aa13.21□□□□□ -0.29
LINC01238-203ENST00000429456 AK7Q96M32 723 aa13.21□□□□□ -0.29
LINC01238-203ENST00000429456 FAM53CQ9NYF3 392 aa13.21□□□□□ -0.29
LINC01238-203ENST00000429456 BCORQ6W2J9 1755 aa13.21□□□□□ -0.29
LINC01238-203ENST00000429456 SLIT2O94813 1529 aa13.21□□□□□ -0.29
LINC01238-203ENST00000429456 FOXN1O15353 648 aa13.21□□□□□ -0.3
LINC01238-203ENST00000429456 PTPREP23469 700 aa13.21□□□□□ -0.3
LINC01238-203ENST00000429456 ETF1P62495 437 aaKnown RBP13.21□□□□□ -0.3
LINC01238-203ENST00000429456 SAFBQ15424 915 aaKnown RBP eCLIP13.21□□□□□ -0.3
LINC01238-203ENST00000429456 DIS3L2Q8IYB7 885 aaKnown RBP13.21□□□□□ -0.3
LINC01238-203ENST00000429456 SYTL4Q96C24 671 aaPredicted RBP13.21□□□□□ -0.3
LINC01238-203ENST00000429456 FOXP1Q9H334 677 aaPredicted RBP13.21□□□□□ -0.3
LINC01238-203ENST00000429456 FBXO2Q9UK22 296 aaPredicted RBP13.21□□□□□ -0.3
LINC01238-203ENST00000429456 PHLPP2Q6ZVD8 1323 aa13.21□□□□□ -0.3
LINC01238-203ENST00000429456 TMEM232C9JQI7 657 aa13.2□□□□□ -0.3
LINC01238-203ENST00000429456 TOP1P11387 765 aaKnown RBP13.2□□□□□ -0.3
LINC01238-203ENST00000429456 IL6STP40189 918 aaPredicted RBP13.2□□□□□ -0.3
LINC01238-203ENST00000429456 RTN1Q16799 776 aa13.2□□□□□ -0.3
LINC01238-203ENST00000429456 NT5DC1Q5TFE4 455 aa13.2□□□□□ -0.3
LINC01238-203ENST00000429456 FCHSD1Q86WN1 690 aa13.2□□□□□ -0.3
LINC01238-203ENST00000429456 DZIP3Q86Y13 1208 aaKnown RBP13.2□□□□□ -0.3
LINC01238-203ENST00000429456 MTA3Q9BTC8 594 aa13.2□□□□□ -0.3
LINC01238-203ENST00000429456 INTS13Q9NVM9 706 aa13.2□□□□□ -0.3
LINC01238-203ENST00000429456 MAN1B1Q9UKM7 699 aa13.2□□□□□ -0.3
LINC01238-203ENST00000429456 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.2□□□□□ -0.3
LINC01238-203ENST00000429456 PNPLA7Q6ZV29 1317 aa13.2□□□□□ -0.3
LINC01238-203ENST00000429456 NHSL1Q5SYE7 1610 aa13.2□□□□□ -0.3
LINC01238-203ENST00000429456 PRKAB2O43741 272 aa13.2□□□□□ -0.3
LINC01238-203ENST00000429456 GNAT2P19087 354 aa13.2□□□□□ -0.3
LINC01238-203ENST00000429456 GABPB1Q06547 395 aaPredicted RBP13.2□□□□□ -0.3
LINC01238-203ENST00000429456 WTAPQ15007 396 aa13.2□□□□□ -0.3
LINC01238-203ENST00000429456 RILPL1Q5EBL4 403 aa13.2□□□□□ -0.3
LINC01238-203ENST00000429456 SPECC1Q5M775 1068 aa13.2□□□□□ -0.3
LINC01238-203ENST00000429456 TRIM65Q6PJ69 517 aa13.2□□□□□ -0.3
LINC01238-203ENST00000429456 PAXIP1Q6ZW49 1069 aaPredicted RBP13.2□□□□□ -0.3
LINC01238-203ENST00000429456 REXO1L1PQ8IX06 675 aa13.2□□□□□ -0.3
LINC01238-203ENST00000429456 TRIM22Q8IYM9 498 aa13.2□□□□□ -0.3
LINC01238-203ENST00000429456 HOOK1Q9UJC3 728 aaKnown RBP13.2□□□□□ -0.3
LINC01238-203ENST00000429456 KCNJ14Q9UNX9 436 aa13.2□□□□□ -0.3
LINC01238-203ENST00000429456 DISP2A7MBM2 1401 aa13.19□□□□□ -0.3
LINC01238-203ENST00000429456 SARSP49591 514 aaKnown RBP13.19□□□□□ -0.3
LINC01238-203ENST00000429456 RCAN1P53805 252 aa13.19□□□□□ -0.3
LINC01238-203ENST00000429456 GRIN1Q05586 938 aa13.19□□□□□ -0.3
LINC01238-203ENST00000429456 TBX2Q13207 712 aaPredicted RBP13.19□□□□□ -0.3
LINC01238-203ENST00000429456 POSTNQ15063 836 aa13.19□□□□□ -0.3
LINC01238-203ENST00000429456 HOMER1Q86YM7 354 aa13.19□□□□□ -0.3
LINC01238-203ENST00000429456 TMEM139Q8IV31 216 aa13.19□□□□□ -0.3
LINC01238-203ENST00000429456 LCORLQ8N3X6 602 aa13.19□□□□□ -0.3
LINC01238-203ENST00000429456 CRACR2BQ8N4Y2 399 aaPredicted RBP13.19□□□□□ -0.3
LINC01238-203ENST00000429456 ZNF579Q8NAF0 562 aaKnown RBP13.19□□□□□ -0.3
LINC01238-203ENST00000429456 LRRN4CLQ8ND94 238 aa13.19□□□□□ -0.3
LINC01238-203ENST00000429456 ZHX1Q9UKY1 873 aaPredicted RBP13.19□□□□□ -0.3
LINC01238-203ENST00000429456 SNAP23O00161 211 aa13.18□□□□□ -0.3
LINC01238-203ENST00000429456 KIF20AO95235 890 aa13.18□□□□□ -0.3
LINC01238-203ENST00000429456 DEXIO95424 95 aa13.18□□□□□ -0.3
LINC01238-203ENST00000429456 H2AFXP16104 143 aaPredicted RBP13.18□□□□□ -0.3
LINC01238-203ENST00000429456 SART3Q15020 963 aaKnown RBP13.18□□□□□ -0.3
LINC01238-203ENST00000429456 ERCC6LQ2NKX8 1250 aa13.18□□□□□ -0.3
LINC01238-203ENST00000429456 KRT222Q8N1A0 295 aa13.18□□□□□ -0.3
LINC01238-203ENST00000429456 TMTC2Q8N394 836 aa13.18□□□□□ -0.3
LINC01238-203ENST00000429456 ZKSCAN3Q9BRR0 538 aa13.18□□□□□ -0.3
LINC01238-203ENST00000429456 UTP14AQ9BVJ6 771 aaKnown RBP13.18□□□□□ -0.3
LINC01238-203ENST00000429456 NACAP1Q9BZK3 213 aa13.18□□□□□ -0.3
LINC01238-203ENST00000429456 SLC4A4Q9Y6R1 1079 aa13.18□□□□□ -0.3
LINC01238-203ENST00000429456 KAT6BQ8WYB5 2073 aa13.18□□□□□ -0.3
LINC01238-203ENST00000429456 PRR29P0C7W0 189 aa13.18□□□□□ -0.3
LINC01238-203ENST00000429456 ZNF18P17022 549 aa13.18□□□□□ -0.3
LINC01238-203ENST00000429456 TDO2P48775 406 aa13.18□□□□□ -0.3
LINC01238-203ENST00000429456 HSPA2P54652 639 aa13.18□□□□□ -0.3
LINC01238-203ENST00000429456 GOLGA8FQ08AF8 430 aa13.18□□□□□ -0.3
LINC01238-203ENST00000429456 GOLGA8DPQ0D2H9 430 aa13.18□□□□□ -0.3
LINC01238-203ENST00000429456 MORC3Q14149 939 aa13.18□□□□□ -0.3
LINC01238-203ENST00000429456 RRP12Q5JTH9 1297 aaKnown RBP13.18□□□□□ -0.3
LINC01238-203ENST00000429456 MLKLQ8NB16 471 aa13.18□□□□□ -0.3
LINC01238-203ENST00000429456 SERTAD1Q9UHV2 236 aa13.18□□□□□ -0.3
LINC01238-203ENST00000429456 DNAI1Q9UI46 699 aa13.18□□□□□ -0.3
LINC01238-203ENST00000429456 SRPRBQ9Y5M8 271 aaKnown RBP13.18□□□□□ -0.3
LINC01238-203ENST00000429456 CCDC196A0A1B0GTZ2 297 aa13.17□□□□□ -0.3
LINC01238-203ENST00000429456 ERICH2A1L162 156 aa13.17□□□□□ -0.3
LINC01238-203ENST00000429456 POLR2DO15514 142 aaKnown RBP13.17□□□□□ -0.3
LINC01238-203ENST00000429456 ARHGAP6O43182 974 aa13.17□□□□□ -0.3
LINC01238-203ENST00000429456 FMR1Q06787 632 aaKnown RBP eCLIP13.17□□□□□ -0.3
LINC01238-203ENST00000429456 SUSD4Q5VX71 490 aa13.17□□□□□ -0.3
LINC01238-203ENST00000429456 ENOX1Q8TC92 643 aaKnown RBP13.17□□□□□ -0.3
LINC01238-203ENST00000429456 MPHOSPH8Q99549 860 aa13.17□□□□□ -0.3
LINC01238-203ENST00000429456 NOL10Q9BSC4 688 aaKnown RBP13.17□□□□□ -0.3
LINC01238-203ENST00000429456 DACH1Q9UI36 760 aa13.17□□□□□ -0.3
LINC01238-203ENST00000429456 PCDHB6Q9Y5E3 794 aa13.17□□□□□ -0.3
LINC01238-203ENST00000429456 MYH6P13533 1939 aa13.17□□□□□ -0.3
LINC01238-203ENST00000429456 ZBTB22O15209 634 aa13.17□□□□□ -0.3
LINC01238-203ENST00000429456 FANCGO15287 622 aa13.17□□□□□ -0.3
LINC01238-203ENST00000429456 ZSCAN12O43309 604 aa13.17□□□□□ -0.3
LINC01238-203ENST00000429456 NR5A1Q13285 461 aa13.17□□□□□ -0.3
LINC01238-203ENST00000429456 PTPN21Q16825 1174 aa13.17□□□□□ -0.3
LINC01238-203ENST00000429456 ZNF654Q8IZM8 581 aa13.17□□□□□ -0.3
LINC01238-203ENST00000429456 TRIML1Q8N9V2 468 aa13.17□□□□□ -0.3
LINC01238-203ENST00000429456 FANCBQ8NB91 859 aa13.17□□□□□ -0.3
LINC01238-203ENST00000429456 SMARCE1Q969G3 411 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms