RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 FAM177A1Q8N128 213 aaPredicted RBP10.02□□□□□ -0.8
CDC42BPA-206ENST00000429440 BICD1Q96G01 975 aa10.02□□□□□ -0.8
CDC42BPA-206ENST00000429440 RBM41Q96IZ5 413 aaKnown RBP10.02□□□□□ -0.8
CDC42BPA-206ENST00000429440 CCDC114Q96M63 670 aa10.02□□□□□ -0.8
CDC42BPA-206ENST00000429440 ARHGAP23Q9P227 1491 aa10.02□□□□□ -0.81
CDC42BPA-206ENST00000429440 A6NHS1 94 aa10.02□□□□□ -0.81
CDC42BPA-206ENST00000429440 E2F5Q15329 346 aa10.02□□□□□ -0.81
CDC42BPA-206ENST00000429440 WHAMMP3Q1A5X7 153 aa10.02□□□□□ -0.81
CDC42BPA-206ENST00000429440 CCDC57Q2TAC2 916 aa10.02□□□□□ -0.81
CDC42BPA-206ENST00000429440 ACBD5Q5T8D3 534 aaPredicted RBP10.02□□□□□ -0.81
CDC42BPA-206ENST00000429440 TMEM139Q8IV31 216 aa10.02□□□□□ -0.81
CDC42BPA-206ENST00000429440 TSPYL6Q8N831 410 aa10.02□□□□□ -0.81
CDC42BPA-206ENST00000429440 RASSF8Q8NHQ8 419 aa10.02□□□□□ -0.81
CDC42BPA-206ENST00000429440 SCLT1Q96NL6 688 aa10.02□□□□□ -0.81
CDC42BPA-206ENST00000429440 HYPKQ9NX55 129 aa10.02□□□□□ -0.81
CDC42BPA-206ENST00000429440 SLIT1O75093 1534 aa10.02□□□□□ -0.81
CDC42BPA-206ENST00000429440 SETD1BQ9UPS6 1966 aaKnown RBP10.02□□□□□ -0.81
CDC42BPA-206ENST00000429440 CTAGE15A4D2H0 777 aa10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 B4DLN1 442 aa10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 GOLGA8KD6RF30 607 aa10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 CBFA2T2O43439 604 aa10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 CTAGE8P0CG41 777 aa10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 GGCXP38435 758 aa10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 CEBPAP49715 358 aaPredicted RBP10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 CTAGE6Q86UF2 777 aa10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 CCDC83Q8IWF9 413 aa10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 CCAR1Q8IX12 1150 aaKnown RBP10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 CTAGE4Q8IX94 777 aa10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 NSMCE1Q8WV22 266 aa10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 GORASP1Q9BQQ3 440 aa10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 ZSWIM4Q9H7M6 989 aa10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 PUF60Q9UHX1 559 aaKnown RBP10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 ADCY9O60503 1353 aa10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 VAMP4O75379 141 aa10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 IBSPP21815 317 aaPredicted RBP10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 HDGFP51858 240 aaKnown RBP10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 DEUP1Q05D60 604 aa10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 USP4Q13107 963 aa10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 XRCC4Q13426 336 aa10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 C6orf89Q6UWU4 347 aa10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 CCHCR1Q8TD31 782 aa10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 COG3Q96JB2 828 aa10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 JAKMIP1Q96N16 626 aaKnown RBP10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 AGAP3Q96P47 875 aa10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 TSC22D3Q99576 134 aa10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 YIPF3Q9GZM5 350 aa10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 EHD4Q9H223 541 aa10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 G3BP2Q9UN86 482 aaKnown RBP10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 SNX14Q9Y5W7 946 aa10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 RGPD8O14715 1765 aaPredicted RBP10.01□□□□□ -0.81
CDC42BPA-206ENST00000429440 PLEKHG3A1L390 1219 aa10□□□□□ -0.81
CDC42BPA-206ENST00000429440 AGPSO00116 658 aa10□□□□□ -0.81
CDC42BPA-206ENST00000429440 RHOXF2BP0C7M4 288 aa10□□□□□ -0.81
CDC42BPA-206ENST00000429440 ZBED6P86452 979 aa10□□□□□ -0.81
CDC42BPA-206ENST00000429440 MKRN4PQ13434 485 aaPredicted RBP10□□□□□ -0.81
CDC42BPA-206ENST00000429440 BLMHQ13867 455 aa10□□□□□ -0.81
CDC42BPA-206ENST00000429440 RHOXF2Q9BQY4 288 aa10□□□□□ -0.81
CDC42BPA-206ENST00000429440 TRIM7Q9C029 511 aa10□□□□□ -0.81
CDC42BPA-206ENST00000429440 MMADHCQ9H3L0 296 aaPredicted RBP10□□□□□ -0.81
CDC42BPA-206ENST00000429440 C15orf41Q9Y2V0 281 aa10□□□□□ -0.81
CDC42BPA-206ENST00000429440 USP6P35125 1406 aa10□□□□□ -0.81
CDC42BPA-206ENST00000429440 SALL3Q9BXA9 1300 aa10□□□□□ -0.81
CDC42BPA-206ENST00000429440 PFKFB2O60825 505 aa10□□□□□ -0.81
CDC42BPA-206ENST00000429440 CUL3Q13618 768 aa10□□□□□ -0.81
CDC42BPA-206ENST00000429440 NUTM2GQ5VZR2 741 aa10□□□□□ -0.81
CDC42BPA-206ENST00000429440 CEP85Q6P2H3 762 aa10□□□□□ -0.81
CDC42BPA-206ENST00000429440 CDC37L1Q7L3B6 337 aa10□□□□□ -0.81
CDC42BPA-206ENST00000429440 MBIPQ9NS73 344 aa10□□□□□ -0.81
CDC42BPA-206ENST00000429440 CFAP45Q9UL16 551 aa10□□□□□ -0.81
CDC42BPA-206ENST00000429440 ACEP12821 1306 aa9.99□□□□□ -0.81
CDC42BPA-206ENST00000429440 FAM83GA6ND36 823 aa9.99□□□□□ -0.81
CDC42BPA-206ENST00000429440 TPD52L2O43399 206 aaKnown RBP9.99□□□□□ -0.81
CDC42BPA-206ENST00000429440 MYO1BO43795 1136 aa9.99□□□□□ -0.81
CDC42BPA-206ENST00000429440 HMMRO75330 724 aa9.99□□□□□ -0.81
CDC42BPA-206ENST00000429440 LINGO3P0C6S8 592 aa9.99□□□□□ -0.81
CDC42BPA-206ENST00000429440 EPB41P11171 864 aaKnown RBP9.99□□□□□ -0.81
CDC42BPA-206ENST00000429440 RNF187Q5TA31 235 aaPredicted RBP9.99□□□□□ -0.81
CDC42BPA-206ENST00000429440 PROCA1Q8NCQ7 364 aaPredicted RBP9.99□□□□□ -0.81
CDC42BPA-206ENST00000429440 YIPF2Q9BWQ6 316 aa9.99□□□□□ -0.81
CDC42BPA-206ENST00000429440 EPN3Q9H201 632 aa9.99□□□□□ -0.81
CDC42BPA-206ENST00000429440 TFIP11Q9UBB9 837 aaKnown RBP9.99□□□□□ -0.81
CDC42BPA-206ENST00000429440 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.99□□□□□ -0.81
CDC42BPA-206ENST00000429440 TARSL2A2RTX5 802 aaKnown RBP9.99□□□□□ -0.81
CDC42BPA-206ENST00000429440 IKBKBO14920 756 aa9.99□□□□□ -0.81
CDC42BPA-206ENST00000429440 FANCCQ00597 558 aa9.99□□□□□ -0.81
CDC42BPA-206ENST00000429440 ACCSLQ4AC99 568 aa9.99□□□□□ -0.81
CDC42BPA-206ENST00000429440 EMC10Q5UCC4 262 aa9.99□□□□□ -0.81
CDC42BPA-206ENST00000429440 NAA35Q5VZE5 725 aa9.99□□□□□ -0.81
CDC42BPA-206ENST00000429440 FAM173BQ6P4H8 233 aa9.99□□□□□ -0.81
CDC42BPA-206ENST00000429440 FERMT3Q86UX7 667 aa9.99□□□□□ -0.81
CDC42BPA-206ENST00000429440 CCDC148Q8NFR7 591 aa9.99□□□□□ -0.81
CDC42BPA-206ENST00000429440 C17orf50Q8WW18 174 aa9.99□□□□□ -0.81
CDC42BPA-206ENST00000429440 CUL5Q93034 780 aa9.99□□□□□ -0.81
CDC42BPA-206ENST00000429440 TRIM4Q9C037 500 aa9.99□□□□□ -0.81
CDC42BPA-206ENST00000429440 USP31Q70CQ4 1352 aa9.99□□□□□ -0.81
CDC42BPA-206ENST00000429440 LUC7L3O95232 432 aaKnown RBP9.98□□□□□ -0.81
CDC42BPA-206ENST00000429440 LARGE1O95461 756 aa9.98□□□□□ -0.81
CDC42BPA-206ENST00000429440 TMED1Q13445 227 aa9.98□□□□□ -0.81
CDC42BPA-206ENST00000429440 RIPK1Q13546 671 aa9.98□□□□□ -0.81
CDC42BPA-206ENST00000429440 EIF4A2Q14240 407 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms