RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 SLC8A1P32418 973 aa16.3■□□□□ 0.2
SYNGAP1-203ENST00000428982 METTL24Q5JXM2 366 aa16.3■□□□□ 0.2
SYNGAP1-203ENST00000428982 LMBR1LQ6UX01 489 aa16.3■□□□□ 0.2
SYNGAP1-203ENST00000428982 CCDC121Q6ZUS5 278 aa16.3■□□□□ 0.2
SYNGAP1-203ENST00000428982 CCAR1Q8IX12 1150 aaKnown RBP16.3■□□□□ 0.2
SYNGAP1-203ENST00000428982 ZBTB10Q96DT7 871 aa16.3■□□□□ 0.2
SYNGAP1-203ENST00000428982 TAOK2Q9UL54 1235 aa16.3■□□□□ 0.2
SYNGAP1-203ENST00000428982 RTCBQ9Y3I0 505 aaKnown RBP16.3■□□□□ 0.2
SYNGAP1-203ENST00000428982 CTAGE15A4D2H0 777 aa16.3■□□□□ 0.2
SYNGAP1-203ENST00000428982 GOLGA6CA6NDK9 693 aa16.3■□□□□ 0.2
SYNGAP1-203ENST00000428982 AP1G2O75843 785 aa16.3■□□□□ 0.2
SYNGAP1-203ENST00000428982 GOLGA6DP0CG33 693 aa16.3■□□□□ 0.2
SYNGAP1-203ENST00000428982 CTAGE8P0CG41 777 aa16.3■□□□□ 0.2
SYNGAP1-203ENST00000428982 ME3Q16798 604 aa16.3■□□□□ 0.2
SYNGAP1-203ENST00000428982 CTAGE6Q86UF2 777 aa16.3■□□□□ 0.2
SYNGAP1-203ENST00000428982 CTAGE4Q8IX94 777 aa16.3■□□□□ 0.2
SYNGAP1-203ENST00000428982 PIGBQ92521 554 aa16.3■□□□□ 0.2
SYNGAP1-203ENST00000428982 GOLGA6AQ9NYA3 693 aa16.3■□□□□ 0.2
SYNGAP1-203ENST00000428982 PROSER3Q2NL68 480 aa16.29■□□□□ 0.2
SYNGAP1-203ENST00000428982 MCMDC2Q4G0Z9 681 aa16.29■□□□□ 0.2
SYNGAP1-203ENST00000428982 CCDC148Q8NFR7 591 aa16.29■□□□□ 0.2
SYNGAP1-203ENST00000428982 LEO1Q8WVC0 666 aaPredicted RBP16.29■□□□□ 0.2
SYNGAP1-203ENST00000428982 MAP4K1Q92918 833 aa16.29■□□□□ 0.2
SYNGAP1-203ENST00000428982 BRF1Q92994 677 aa16.29■□□□□ 0.2
SYNGAP1-203ENST00000428982 CD248Q9HCU0 757 aa16.29■□□□□ 0.2
SYNGAP1-203ENST00000428982 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.29■□□□□ 0.2
SYNGAP1-203ENST00000428982 CPA1P15085 419 aa16.29■□□□□ 0.2
SYNGAP1-203ENST00000428982 RANBP1P43487 201 aa16.29■□□□□ 0.2
SYNGAP1-203ENST00000428982 CHCHD3Q9NX63 227 aaKnown RBP16.29■□□□□ 0.2
SYNGAP1-203ENST00000428982 IFNKQ9P0W0 207 aa16.29■□□□□ 0.2
SYNGAP1-203ENST00000428982 H3BQF6 201 aa16.28■□□□□ 0.2
SYNGAP1-203ENST00000428982 BUB1BO60566 1050 aaPredicted RBP16.28■□□□□ 0.2
SYNGAP1-203ENST00000428982 FUT8Q9BYC5 575 aa16.28■□□□□ 0.2
SYNGAP1-203ENST00000428982 NIP7Q9Y221 180 aaKnown RBP eCLIP16.28■□□□□ 0.2
SYNGAP1-203ENST00000428982 CDKL5O76039 1030 aa16.28■□□□□ 0.2
SYNGAP1-203ENST00000428982 FSIP1Q8NA03 581 aa16.28■□□□□ 0.2
SYNGAP1-203ENST00000428982 CAGE1Q8TC20 777 aa16.28■□□□□ 0.2
SYNGAP1-203ENST00000428982 PA2G4Q9UQ80 394 aaKnown RBP16.28■□□□□ 0.2
SYNGAP1-203ENST00000428982 CEMIPQ8WUJ3 1361 aa16.28■□□□□ 0.2
SYNGAP1-203ENST00000428982 FOSBP53539 338 aa16.28■□□□□ 0.2
SYNGAP1-203ENST00000428982 GCKRQ14397 625 aa16.28■□□□□ 0.2
SYNGAP1-203ENST00000428982 AFF2P51816 1311 aa16.28■□□□□ 0.2
SYNGAP1-203ENST00000428982 NEFHP12036 1026 aa16.28■□□□□ 0.2
SYNGAP1-203ENST00000428982 HSPA1LP34931 641 aa16.28■□□□□ 0.2
SYNGAP1-203ENST00000428982 PTH1RQ03431 593 aa16.28■□□□□ 0.2
SYNGAP1-203ENST00000428982 LRRN4CLQ8ND94 238 aa16.28■□□□□ 0.2
SYNGAP1-203ENST00000428982 SAMM50Q9Y512 469 aa16.28■□□□□ 0.2
SYNGAP1-203ENST00000428982 RPAP1Q9BWH6 1393 aaPredicted RBP16.28■□□□□ 0.2
SYNGAP1-203ENST00000428982 NAA16Q6N069 864 aaPredicted RBP16.27■□□□□ 0.2
SYNGAP1-203ENST00000428982 LOC102724428A0A0B4J2F2 783 aa16.27■□□□□ 0.2
SYNGAP1-203ENST00000428982 ZEB2O60315 1214 aa16.27■□□□□ 0.2
SYNGAP1-203ENST00000428982 SIK1P57059 783 aa16.27■□□□□ 0.2
SYNGAP1-203ENST00000428982 SPATS2Q86XZ4 545 aaKnown RBP16.27■□□□□ 0.2
SYNGAP1-203ENST00000428982 ANAPC4Q9UJX5 808 aa16.27■□□□□ 0.2
SYNGAP1-203ENST00000428982 SAFBQ15424 915 aaKnown RBP eCLIP16.27■□□□□ 0.19
SYNGAP1-203ENST00000428982 ALDH8A1Q9H2A2 487 aaPredicted RBP16.27■□□□□ 0.19
SYNGAP1-203ENST00000428982 WASHC4Q2M389 1173 aa16.26■□□□□ 0.19
SYNGAP1-203ENST00000428982 RPS6KA5O75582 802 aa16.26■□□□□ 0.19
SYNGAP1-203ENST00000428982 GNGT1P63211 74 aa16.26■□□□□ 0.19
SYNGAP1-203ENST00000428982 ZNF772Q68DY9 489 aaPredicted RBP16.26■□□□□ 0.19
SYNGAP1-203ENST00000428982 LDHAL6AQ6ZMR3 332 aa16.26■□□□□ 0.19
SYNGAP1-203ENST00000428982 Q6ZUG5 572 aa16.26■□□□□ 0.19
SYNGAP1-203ENST00000428982 KLHL23Q8NBE8 558 aa16.26■□□□□ 0.19
SYNGAP1-203ENST00000428982 THOC1Q96FV9 657 aaKnown RBP16.26■□□□□ 0.19
SYNGAP1-203ENST00000428982 G3BP2Q9UN86 482 aaKnown RBP16.26■□□□□ 0.19
SYNGAP1-203ENST00000428982 SPATA31A1Q5TZJ5 1347 aa16.26■□□□□ 0.19
SYNGAP1-203ENST00000428982 NEURL1BA8MQ27 555 aa16.26■□□□□ 0.19
SYNGAP1-203ENST00000428982 GNPATO15228 680 aa16.26■□□□□ 0.19
SYNGAP1-203ENST00000428982 ATP2C2O75185 946 aa16.26■□□□□ 0.19
SYNGAP1-203ENST00000428982 TTC6Q86TZ1 520 aa16.26■□□□□ 0.19
SYNGAP1-203ENST00000428982 CAPS2Q9BXY5 557 aa16.26■□□□□ 0.19
SYNGAP1-203ENST00000428982 CASP8Q14790 479 aa16.26■□□□□ 0.19
SYNGAP1-203ENST00000428982 IMMTQ16891 758 aaKnown RBP16.26■□□□□ 0.19
SYNGAP1-203ENST00000428982 ATRIPQ8WXE1 791 aa16.26■□□□□ 0.19
SYNGAP1-203ENST00000428982 SETDB2Q96T68 719 aa16.26■□□□□ 0.19
SYNGAP1-203ENST00000428982 PXDNQ92626 1479 aa16.25■□□□□ 0.19
SYNGAP1-203ENST00000428982 NECTIN1Q15223 517 aa16.25■□□□□ 0.19
SYNGAP1-203ENST00000428982 MSL1Q68DK7 614 aa16.25■□□□□ 0.19
SYNGAP1-203ENST00000428982 CDC37L1Q7L3B6 337 aa16.25■□□□□ 0.19
SYNGAP1-203ENST00000428982 DHX32Q7L7V1 743 aaKnown RBP16.25■□□□□ 0.19
SYNGAP1-203ENST00000428982 DACH1Q9UI36 760 aa16.25■□□□□ 0.19
SYNGAP1-203ENST00000428982 OVOS2A0A0G2JMS6 1433 aa16.25■□□□□ 0.19
SYNGAP1-203ENST00000428982 SKAP2O75563 359 aaPredicted RBP16.25■□□□□ 0.19
SYNGAP1-203ENST00000428982 LRRC23Q53EV4 343 aaPredicted RBP16.25■□□□□ 0.19
SYNGAP1-203ENST00000428982 TTLL7Q6ZT98 887 aa16.25■□□□□ 0.19
SYNGAP1-203ENST00000428982 KCNG4Q8TDN1 519 aa16.25■□□□□ 0.19
SYNGAP1-203ENST00000428982 KLC4Q9NSK0 619 aa16.25■□□□□ 0.19
SYNGAP1-203ENST00000428982 SLIT3O75094 1523 aa16.25■□□□□ 0.19
SYNGAP1-203ENST00000428982 CCZ1BP86790 482 aa16.25■□□□□ 0.19
SYNGAP1-203ENST00000428982 CCZ1P86791 482 aaPredicted RBP16.25■□□□□ 0.19
SYNGAP1-203ENST00000428982 VPS72Q15906 364 aa16.25■□□□□ 0.19
SYNGAP1-203ENST00000428982 MRPS27Q92552 414 aaKnown RBP16.25■□□□□ 0.19
SYNGAP1-203ENST00000428982 BAG1Q99933 345 aaPredicted RBP16.25■□□□□ 0.19
SYNGAP1-203ENST00000428982 FUCA2Q9BTY2 467 aa16.25■□□□□ 0.19
SYNGAP1-203ENST00000428982 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.25■□□□□ 0.198e-7■■■■□ 22
SYNGAP1-203ENST00000428982 TPCN1Q9ULQ1 816 aa16.25■□□□□ 0.19
SYNGAP1-203ENST00000428982 MEGF6O75095 1541 aa16.24■□□□□ 0.19
SYNGAP1-203ENST00000428982 KARSQ15046 597 aaKnown RBP16.24■□□□□ 0.19
SYNGAP1-203ENST00000428982 CDC5LQ99459 802 aaKnown RBP16.24■□□□□ 0.19
SYNGAP1-203ENST00000428982 COL5A2P05997 1499 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms