RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 CCDC171Q6TFL3 1326 aa13.3□□□□□ -0.28
CECR3-201ENST00000428828 RAD50Q92878 1312 aa13.3□□□□□ -0.28
CECR3-201ENST00000428828 GOLGA6L6A8MZA4 724 aa13.3□□□□□ -0.28
CECR3-201ENST00000428828 IGSF3O75054 1194 aa13.3□□□□□ -0.28
CECR3-201ENST00000428828 ADCY5O95622 1261 aa13.3□□□□□ -0.28
CECR3-201ENST00000428828 RPS12P25398 132 aaKnown RBP13.3□□□□□ -0.28
CECR3-201ENST00000428828 CFAP100Q494V2 611 aa13.3□□□□□ -0.28
CECR3-201ENST00000428828 TTC12Q9H892 705 aaPredicted RBP13.3□□□□□ -0.28
CECR3-201ENST00000428828 CNOT7Q9UIV1 285 aaKnown RBP13.3□□□□□ -0.28
CECR3-201ENST00000428828 SCN4AP35499 1836 aa13.3□□□□□ -0.28
CECR3-201ENST00000428828 POLR2AP24928 1970 aaKnown RBP13.3□□□□□ -0.28
CECR3-201ENST00000428828 LAMA4Q16363 1823 aa13.29□□□□□ -0.28
CECR3-201ENST00000428828 KDM4AO75164 1064 aa13.29□□□□□ -0.28
CECR3-201ENST00000428828 DPY19L2Q6NUT2 758 aa13.29□□□□□ -0.28
CECR3-201ENST00000428828 SERPINA10Q9UK55 444 aa13.29□□□□□ -0.28
CECR3-201ENST00000428828 GAKO14976 1311 aa13.29□□□□□ -0.28
CECR3-201ENST00000428828 BRD1O95696 1058 aa13.29□□□□□ -0.28
CECR3-201ENST00000428828 VPS53Q5VIR6 699 aa13.29□□□□□ -0.28
CECR3-201ENST00000428828 TICAM2Q86XR7 235 aa13.29□□□□□ -0.28
CECR3-201ENST00000428828 ZNF397Q8NF99 534 aaPredicted RBP13.29□□□□□ -0.28
CECR3-201ENST00000428828 SH3RF3Q8TEJ3 882 aaPredicted RBP13.29□□□□□ -0.28
CECR3-201ENST00000428828 RIOK1Q9BRS2 568 aaKnown RBP13.29□□□□□ -0.28
CECR3-201ENST00000428828 FEZ2Q9UHY8 353 aaPredicted RBP13.29□□□□□ -0.28
CECR3-201ENST00000428828 ZC3H4Q9UPT8 1303 aaKnown RBP13.28□□□□□ -0.28
CECR3-201ENST00000428828 PRKAB2O43741 272 aa13.28□□□□□ -0.28
CECR3-201ENST00000428828 BAG3O95817 575 aa13.28□□□□□ -0.28
CECR3-201ENST00000428828 EGFRP00533 1210 aa13.28□□□□□ -0.28
CECR3-201ENST00000428828 APPP05067 770 aa13.28□□□□□ -0.28
CECR3-201ENST00000428828 MCM2P49736 904 aa13.28□□□□□ -0.28
CECR3-201ENST00000428828 DLGAP5Q15398 846 aa13.28□□□□□ -0.28
CECR3-201ENST00000428828 TBC1D10BQ4KMP7 808 aaPredicted RBP13.28□□□□□ -0.28
CECR3-201ENST00000428828 AXDND1Q5T1B0 1012 aaPredicted RBP13.28□□□□□ -0.28
CECR3-201ENST00000428828 HHIPL2Q6UWX4 724 aa13.28□□□□□ -0.28
CECR3-201ENST00000428828 SAMD7Q7Z3H4 446 aa13.28□□□□□ -0.28
CECR3-201ENST00000428828 TMEM87AQ8NBN3 555 aa13.28□□□□□ -0.28
CECR3-201ENST00000428828 SDR42E1Q8WUS8 393 aa13.28□□□□□ -0.28
CECR3-201ENST00000428828 MYOZ2Q9NPC6 264 aa13.28□□□□□ -0.28
CECR3-201ENST00000428828 SLC4A4Q9Y6R1 1079 aa13.28□□□□□ -0.28
CECR3-201ENST00000428828 MYH8P13535 1937 aa13.28□□□□□ -0.28
CECR3-201ENST00000428828 DDX60LQ5H9U9 1706 aaKnown RBP13.28□□□□□ -0.28
CECR3-201ENST00000428828 GPR75-ASB3A0A0A6YYF3 556 aa13.27□□□□□ -0.28
CECR3-201ENST00000428828 LMOD1P29536 600 aaPredicted RBP13.27□□□□□ -0.28
CECR3-201ENST00000428828 CYP2C19P33261 490 aa13.27□□□□□ -0.28
CECR3-201ENST00000428828 EPS15P42566 896 aa13.27□□□□□ -0.28
CECR3-201ENST00000428828 PKP1Q13835 747 aa13.27□□□□□ -0.28
CECR3-201ENST00000428828 DPF2Q92785 391 aa13.27□□□□□ -0.28
CECR3-201ENST00000428828 SECISBP2LQ93073 1101 aaKnown RBP13.27□□□□□ -0.28
CECR3-201ENST00000428828 ZDHHC15Q96MV8 337 aa13.27□□□□□ -0.28
CECR3-201ENST00000428828 STRBPQ96SI9 672 aaKnown RBP13.27□□□□□ -0.28
CECR3-201ENST00000428828 GPRC5DQ9NZD1 345 aa13.27□□□□□ -0.28
CECR3-201ENST00000428828 WDR90Q96KV7 1748 aa13.27□□□□□ -0.28
CECR3-201ENST00000428828 GLTPD2A6NH11 291 aa13.27□□□□□ -0.29
CECR3-201ENST00000428828 H7C1D1 291 aa13.27□□□□□ -0.29
CECR3-201ENST00000428828 REC8O95072 547 aa13.27□□□□□ -0.29
CECR3-201ENST00000428828 CACNB3P54284 484 aa13.27□□□□□ -0.29
CECR3-201ENST00000428828 HDLBPQ00341 1268 aaKnown RBP13.27□□□□□ -0.29
CECR3-201ENST00000428828 PTH1RQ03431 593 aa13.27□□□□□ -0.29
CECR3-201ENST00000428828 MUM1L1Q5H9M0 696 aa13.27□□□□□ -0.29
CECR3-201ENST00000428828 APOBEC3HQ6NTF7 200 aaKnown RBP13.27□□□□□ -0.29
CECR3-201ENST00000428828 TMED8Q6PL24 325 aaPredicted RBP13.27□□□□□ -0.29
CECR3-201ENST00000428828 TEX11Q8IYF3 940 aa13.27□□□□□ -0.29
CECR3-201ENST00000428828 FAM163AQ96GL9 167 aaPredicted RBP13.27□□□□□ -0.29
CECR3-201ENST00000428828 PRMT6Q96LA8 375 aaPredicted RBP13.27□□□□□ -0.29
CECR3-201ENST00000428828 TDRD3Q9H7E2 651 aaKnown RBP13.27□□□□□ -0.29
CECR3-201ENST00000428828 USP40Q9NVE5 1235 aa13.27□□□□□ -0.29
CECR3-201ENST00000428828 CLRN2A0PK11 232 aa13.26□□□□□ -0.29
CECR3-201ENST00000428828 CLGNO14967 610 aa13.26□□□□□ -0.29
CECR3-201ENST00000428828 HSPD1P10809 573 aaKnown RBP13.26□□□□□ -0.29
CECR3-201ENST00000428828 ZNF280AP59817 542 aaPredicted RBP13.26□□□□□ -0.29
CECR3-201ENST00000428828 PICALMQ13492 652 aa13.26□□□□□ -0.29
CECR3-201ENST00000428828 KIF4BQ2VIQ3 1234 aa13.26□□□□□ -0.29
CECR3-201ENST00000428828 SLC4A8Q2Y0W8 1093 aa13.26□□□□□ -0.29
CECR3-201ENST00000428828 NBPF9Q3BBW0 867 aa13.26□□□□□ -0.29
CECR3-201ENST00000428828 CCDC183Q5T5S1 534 aa13.26□□□□□ -0.29
CECR3-201ENST00000428828 CDC42EP5Q6NZY7 148 aa13.26□□□□□ -0.29
CECR3-201ENST00000428828 USP26Q9BXU7 913 aa13.26□□□□□ -0.29
CECR3-201ENST00000428828 TRIM34Q9BYJ4 488 aa13.26□□□□□ -0.29
CECR3-201ENST00000428828 CRNKL1Q9BZJ0 848 aaKnown RBP13.26□□□□□ -0.29
CECR3-201ENST00000428828 RNF216Q9NWF9 866 aaPredicted RBP13.26□□□□□ -0.29
CECR3-201ENST00000428828 SPDYE2BA6NHP3 402 aa13.25□□□□□ -0.29
CECR3-201ENST00000428828 SPDYE6P0CI01 402 aa13.25□□□□□ -0.29
CECR3-201ENST00000428828 USP5P45974 858 aa13.25□□□□□ -0.29
CECR3-201ENST00000428828 RNF20Q5VTR2 975 aa13.25□□□□□ -0.29
CECR3-201ENST00000428828 TRPM4Q8TD43 1214 aa13.25□□□□□ -0.29
CECR3-201ENST00000428828 ZNF526Q8TF50 670 aaPredicted RBP13.25□□□□□ -0.29
CECR3-201ENST00000428828 TGFBRAP1Q8WUH2 860 aa13.25□□□□□ -0.29
CECR3-201ENST00000428828 INTS4Q96HW7 963 aaKnown RBP13.25□□□□□ -0.29
CECR3-201ENST00000428828 LSG1Q9H089 658 aaKnown RBP13.25□□□□□ -0.29
CECR3-201ENST00000428828 WNT10BO00744 389 aa13.25□□□□□ -0.29
CECR3-201ENST00000428828 PLCG2P16885 1265 aa13.25□□□□□ -0.29
CECR3-201ENST00000428828 RHBDL3P58872 404 aa13.25□□□□□ -0.29
CECR3-201ENST00000428828 MAPKAPK5Q8IW41 473 aa13.25□□□□□ -0.29
CECR3-201ENST00000428828 MRIQ9BWK5 157 aa13.25□□□□□ -0.29
CECR3-201ENST00000428828 KCNF1Q9H3M0 494 aa13.25□□□□□ -0.29
CECR3-201ENST00000428828 VEZTQ9HBM0 779 aa13.25□□□□□ -0.29
CECR3-201ENST00000428828 SCAF8Q9UPN6 1271 aaKnown RBP13.25□□□□□ -0.29
CECR3-201ENST00000428828 FOXP2O15409 715 aa13.24□□□□□ -0.29
CECR3-201ENST00000428828 GNAT2P19087 354 aa13.24□□□□□ -0.29
CECR3-201ENST00000428828 TDO2P48775 406 aa13.24□□□□□ -0.29
CECR3-201ENST00000428828 PPP4CP60510 307 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms