RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 DDTLA6NHG4 134 aaPredicted RBP9.37□□□□□ -0.91
HMGA1P4-201ENST00000428643 ADM5C9JUS6 153 aa9.37□□□□□ -0.91
HMGA1P4-201ENST00000428643 SMIM22K7EJ46 135 aa9.37□□□□□ -0.91
HMGA1P4-201ENST00000428643 PRDM1O75626 825 aa9.37□□□□□ -0.91
HMGA1P4-201ENST00000428643 CASTP20810 708 aaKnown RBP9.37□□□□□ -0.91
HMGA1P4-201ENST00000428643 PLCD1P51178 756 aa9.37□□□□□ -0.91
HMGA1P4-201ENST00000428643 PDE4BQ07343 736 aa9.37□□□□□ -0.91
HMGA1P4-201ENST00000428643 AKNAD1Q5T1N1 836 aa9.37□□□□□ -0.91
HMGA1P4-201ENST00000428643 STOX1Q6ZVD7 989 aa9.37□□□□□ -0.91
HMGA1P4-201ENST00000428643 SH3BP5LQ7L8J4 393 aa9.37□□□□□ -0.91
HMGA1P4-201ENST00000428643 KRT26Q7Z3Y9 468 aa9.37□□□□□ -0.91
HMGA1P4-201ENST00000428643 SLC44A5Q8NCS7 719 aa9.37□□□□□ -0.91
HMGA1P4-201ENST00000428643 STAG1Q8WVM7 1258 aa9.37□□□□□ -0.91
HMGA1P4-201ENST00000428643 KCNB2Q92953 911 aa9.37□□□□□ -0.91
HMGA1P4-201ENST00000428643 UPF3BQ9BZI7 483 aaKnown RBP9.37□□□□□ -0.91
HMGA1P4-201ENST00000428643 CNNM2Q9H8M5 875 aa9.37□□□□□ -0.91
HMGA1P4-201ENST00000428643 ZNF287Q9HBT7 754 aa9.37□□□□□ -0.91
HMGA1P4-201ENST00000428643 PI4KBQ9UBF8 816 aa9.37□□□□□ -0.91
HMGA1P4-201ENST00000428643 ANAPC4Q9UJX5 808 aa9.37□□□□□ -0.91
HMGA1P4-201ENST00000428643 PPP2R3BQ9Y5P8 575 aa9.37□□□□□ -0.91
HMGA1P4-201ENST00000428643 FAM196BA6NMK8 535 aa9.36□□□□□ -0.91
HMGA1P4-201ENST00000428643 POTECB2RU33 542 aa9.36□□□□□ -0.91
HMGA1P4-201ENST00000428643 B4E1Z4 1266 aa9.36□□□□□ -0.91
HMGA1P4-201ENST00000428643 PCP11498 1178 aaKnown RBP9.36□□□□□ -0.91
HMGA1P4-201ENST00000428643 PSMA5P28066 241 aa9.36□□□□□ -0.91
HMGA1P4-201ENST00000428643 C1QTNF8P60827 252 aa9.36□□□□□ -0.91
HMGA1P4-201ENST00000428643 RABEP1Q15276 862 aa9.36□□□□□ -0.91
HMGA1P4-201ENST00000428643 ADCK5Q3MIX3 580 aa9.36□□□□□ -0.91
HMGA1P4-201ENST00000428643 TSGA10IPQ3SY00 556 aa9.36□□□□□ -0.91
HMGA1P4-201ENST00000428643 BLOC1S2Q6QNY1 142 aa9.36□□□□□ -0.91
HMGA1P4-201ENST00000428643 C16orf86Q6ZW13 317 aa9.36□□□□□ -0.91
HMGA1P4-201ENST00000428643 CDAN1Q8IWY9 1227 aa9.36□□□□□ -0.91
HMGA1P4-201ENST00000428643 NCOA7Q8NI08 942 aa9.36□□□□□ -0.91
HMGA1P4-201ENST00000428643 ZC3H15Q8WU90 426 aaKnown RBP9.36□□□□□ -0.91
HMGA1P4-201ENST00000428643 NEK1Q96PY6 1258 aa9.36□□□□□ -0.91
HMGA1P4-201ENST00000428643 KRT23Q9C075 422 aa9.36□□□□□ -0.91
HMGA1P4-201ENST00000428643 EHD4Q9H223 541 aa9.36□□□□□ -0.91
HMGA1P4-201ENST00000428643 MKNK2Q9HBH9 465 aa9.36□□□□□ -0.91
HMGA1P4-201ENST00000428643 INCENPQ9NQS7 918 aa9.36□□□□□ -0.91
HMGA1P4-201ENST00000428643 TSHZ2Q9NRE2 1034 aa9.36□□□□□ -0.91
HMGA1P4-201ENST00000428643 RANBP6O60518 1105 aaKnown RBP9.35□□□□□ -0.91
HMGA1P4-201ENST00000428643 KDM4AO75164 1064 aa9.35□□□□□ -0.91
HMGA1P4-201ENST00000428643 HMGB1P09429 215 aaKnown RBP9.35□□□□□ -0.91
HMGA1P4-201ENST00000428643 CPA1P15085 419 aa9.35□□□□□ -0.91
HMGA1P4-201ENST00000428643 FGD1P98174 961 aa9.35□□□□□ -0.91
HMGA1P4-201ENST00000428643 PRAMEF18Q5VWM3 479 aa9.35□□□□□ -0.91
HMGA1P4-201ENST00000428643 LDHDQ86WU2 507 aa9.35□□□□□ -0.91
HMGA1P4-201ENST00000428643 ESR2Q92731 530 aa9.35□□□□□ -0.91
HMGA1P4-201ENST00000428643 HOOK2Q96ED9 719 aa9.35□□□□□ -0.91
HMGA1P4-201ENST00000428643 TEPSINQ96N21 525 aa9.35□□□□□ -0.91
HMGA1P4-201ENST00000428643 KIF2CQ99661 725 aa9.35□□□□□ -0.91
HMGA1P4-201ENST00000428643 TM6SF1Q9BZW5 370 aa9.35□□□□□ -0.91
HMGA1P4-201ENST00000428643 GPBP1L1Q9HC44 474 aaPredicted RBP9.35□□□□□ -0.91
HMGA1P4-201ENST00000428643 SWAP70Q9UH65 585 aa9.35□□□□□ -0.91
HMGA1P4-201ENST00000428643 HERC5Q9UII4 1024 aaKnown RBP9.35□□□□□ -0.91
HMGA1P4-201ENST00000428643 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.35□□□□□ -0.91
HMGA1P4-201ENST00000428643 CYP46A1Q9Y6A2 500 aa9.35□□□□□ -0.91
HMGA1P4-201ENST00000428643 LAMB1P07942 1786 aa9.35□□□□□ -0.91
HMGA1P4-201ENST00000428643 LAMA4Q16363 1823 aa9.34□□□□□ -0.91
HMGA1P4-201ENST00000428643 TSPY2A6NKD2 308 aa9.34□□□□□ -0.91
HMGA1P4-201ENST00000428643 PRC1O43663 620 aa9.34□□□□□ -0.91
HMGA1P4-201ENST00000428643 ORC4O43929 436 aa9.34□□□□□ -0.91
HMGA1P4-201ENST00000428643 POTEIP0CG38 1075 aa9.34□□□□□ -0.91
HMGA1P4-201ENST00000428643 POTEJP0CG39 1038 aa9.34□□□□□ -0.91
HMGA1P4-201ENST00000428643 SLURP2P0DP57 97 aa9.34□□□□□ -0.91
HMGA1P4-201ENST00000428643 MCM5P33992 734 aa9.34□□□□□ -0.91
HMGA1P4-201ENST00000428643 SHMT1P34896 483 aa9.34□□□□□ -0.91
HMGA1P4-201ENST00000428643 CDK8P49336 464 aa9.34□□□□□ -0.91
HMGA1P4-201ENST00000428643 NEK4P51957 841 aa9.34□□□□□ -0.91
HMGA1P4-201ENST00000428643 GABPAQ06546 454 aa9.34□□□□□ -0.91
HMGA1P4-201ENST00000428643 DCAF15Q66K64 600 aa9.34□□□□□ -0.91
HMGA1P4-201ENST00000428643 MAP1SQ66K74 1059 aaPredicted RBP9.34□□□□□ -0.91
HMGA1P4-201ENST00000428643 MIGA2Q7L4E1 593 aa9.34□□□□□ -0.91
HMGA1P4-201ENST00000428643 USP48Q86UV5 1035 aa9.34□□□□□ -0.91
HMGA1P4-201ENST00000428643 FOXP4Q8IVH2 680 aaPredicted RBP9.34□□□□□ -0.91
HMGA1P4-201ENST00000428643 MB21D2Q8IYB1 491 aaPredicted RBP9.34□□□□□ -0.91
HMGA1P4-201ENST00000428643 TCEANC2Q96MN5 208 aa9.34□□□□□ -0.91
HMGA1P4-201ENST00000428643 UBAC1Q9BSL1 405 aa9.34□□□□□ -0.91
HMGA1P4-201ENST00000428643 GLIS2Q9BZE0 524 aaPredicted RBP9.34□□□□□ -0.91
HMGA1P4-201ENST00000428643 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.34□□□□□ -0.91
HMGA1P4-201ENST00000428643 TAOK2Q9UL54 1235 aa9.34□□□□□ -0.91
HMGA1P4-201ENST00000428643 TACC3Q9Y6A5 838 aa9.34□□□□□ -0.91
HMGA1P4-201ENST00000428643 SCN4AP35499 1836 aa9.33□□□□□ -0.92
HMGA1P4-201ENST00000428643 MPHOSPH10O00566 681 aaKnown RBP9.33□□□□□ -0.92
HMGA1P4-201ENST00000428643 ST18O60284 1047 aa9.33□□□□□ -0.92
HMGA1P4-201ENST00000428643 TSPY3P0CV98 308 aa9.33□□□□□ -0.92
HMGA1P4-201ENST00000428643 TSPY8P0CW00 308 aa9.33□□□□□ -0.92
HMGA1P4-201ENST00000428643 RASA1P20936 1047 aa9.33□□□□□ -0.92
HMGA1P4-201ENST00000428643 RPS6KB1P23443 525 aa9.33□□□□□ -0.92
HMGA1P4-201ENST00000428643 NF2P35240 595 aa9.33□□□□□ -0.92
HMGA1P4-201ENST00000428643 ANP32AP39687 249 aaKnown RBP9.33□□□□□ -0.92
HMGA1P4-201ENST00000428643 TFAP4Q01664 338 aa9.33□□□□□ -0.92
HMGA1P4-201ENST00000428643 SART3Q15020 963 aaKnown RBP9.33□□□□□ -0.92
HMGA1P4-201ENST00000428643 SUPT20HL1Q3ZLR7 823 aa9.33□□□□□ -0.92
HMGA1P4-201ENST00000428643 FAM47AQ5JRC9 791 aa9.33□□□□□ -0.92
HMGA1P4-201ENST00000428643 NBPF12Q5TAG4 269 aaPredicted RBP9.33□□□□□ -0.92
HMGA1P4-201ENST00000428643 DLK2Q6UY11 383 aa9.33□□□□□ -0.92
HMGA1P4-201ENST00000428643 RUFY3Q7L099 469 aa9.33□□□□□ -0.92
HMGA1P4-201ENST00000428643 CYB5R4Q7L1T6 521 aa9.33□□□□□ -0.92
HMGA1P4-201ENST00000428643 CDC37L1Q7L3B6 337 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms