RNA–Protein interactions for RNA: ENST00000428413.5

SCAP-206, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 3,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-206ENST00000428413 ANKRD20A12PQ8NF67 263 aa17.18■□□□□ 0.34
SCAP-206ENST00000428413 WASF1Q92558 559 aa17.18■□□□□ 0.34
SCAP-206ENST00000428413 KRT23Q9C075 422 aa17.18■□□□□ 0.34
SCAP-206ENST00000428413 PLEKHA4Q9H4M7 779 aa17.18■□□□□ 0.34
SCAP-206ENST00000428413 SLU7O95391 586 aaKnown RBP17.18■□□□□ 0.34
SCAP-206ENST00000428413 CYP2D6P10635 497 aa17.18■□□□□ 0.34
SCAP-206ENST00000428413 NLRP12P59046 1061 aa17.18■□□□□ 0.34
SCAP-206ENST00000428413 MCM6Q14566 821 aa17.18■□□□□ 0.34
SCAP-206ENST00000428413 SMARCC2Q8TAQ2 1214 aa17.18■□□□□ 0.34
SCAP-206ENST00000428413 STRBPQ96SI9 672 aaKnown RBP17.18■□□□□ 0.34
SCAP-206ENST00000428413 TANGO6Q9C0B7 1094 aa17.18■□□□□ 0.34
SCAP-206ENST00000428413 C1orf167Q5SNV9 1468 aa17.18■□□□□ 0.34
SCAP-206ENST00000428413 GNPATO15228 680 aa17.18■□□□□ 0.34
SCAP-206ENST00000428413 CASQ1P31415 396 aa17.18■□□□□ 0.34
SCAP-206ENST00000428413 MATR3P43243 847 aaKnown RBP eCLIP17.18■□□□□ 0.34
SCAP-206ENST00000428413 FMR1NBQ8N0W7 255 aaPredicted RBP17.18■□□□□ 0.34
SCAP-206ENST00000428413 ZNF710Q8N1W2 664 aa17.18■□□□□ 0.34
SCAP-206ENST00000428413 VIRMAQ69YN4 1812 aaKnown RBP17.17■□□□□ 0.34
SCAP-206ENST00000428413 IQCB1Q15051 598 aa17.17■□□□□ 0.34
SCAP-206ENST00000428413 DHX40Q8IX18 779 aaKnown RBP17.17■□□□□ 0.34
SCAP-206ENST00000428413 MB21D2Q8IYB1 491 aaPredicted RBP17.17■□□□□ 0.34
SCAP-206ENST00000428413 CARD10Q9BWT7 1032 aa17.17■□□□□ 0.34
SCAP-206ENST00000428413 PLEKHA8P1O95397 391 aa17.17■□□□□ 0.34
SCAP-206ENST00000428413 EIF5P55010 431 aaKnown RBP17.17■□□□□ 0.34
SCAP-206ENST00000428413 PPARAQ07869 468 aa17.17■□□□□ 0.34
SCAP-206ENST00000428413 ZNF444Q8N0Y2 327 aaPredicted RBP17.17■□□□□ 0.34
SCAP-206ENST00000428413 FANCBQ8NB91 859 aa17.17■□□□□ 0.34
SCAP-206ENST00000428413 RNF41Q9H4P4 317 aaPredicted RBP17.17■□□□□ 0.34
SCAP-206ENST00000428413 ST7Q9NRC1 585 aa17.17■□□□□ 0.34
SCAP-206ENST00000428413 PAXBP1Q9Y5B6 917 aa17.17■□□□□ 0.34
SCAP-206ENST00000428413 CCDC194A0A1B0GVG4 234 aa17.17■□□□□ 0.34
SCAP-206ENST00000428413 RHOXF2BP0C7M4 288 aa17.17■□□□□ 0.34
SCAP-206ENST00000428413 PRR29P0C7W0 189 aa17.17■□□□□ 0.34
SCAP-206ENST00000428413 GTF2F1P35269 517 aaKnown RBP eCLIP17.17■□□□□ 0.348e-7■■■□□ 18.7
SCAP-206ENST00000428413 RBM5P52756 815 aaKnown RBP eCLIP17.17■□□□□ 0.34
SCAP-206ENST00000428413 NOSTRINQ8IVI9 506 aa17.17■□□□□ 0.34
SCAP-206ENST00000428413 SECISBP2LQ93073 1101 aaKnown RBP17.17■□□□□ 0.34
SCAP-206ENST00000428413 RHOXF2Q9BQY4 288 aa17.17■□□□□ 0.34
SCAP-206ENST00000428413 IRX2Q9BZI1 471 aaPredicted RBP17.17■□□□□ 0.34
SCAP-206ENST00000428413 CSRNP2Q9H175 543 aa17.17■□□□□ 0.34
SCAP-206ENST00000428413 EVX2Q03828 476 aa17.16■□□□□ 0.34
SCAP-206ENST00000428413 SLC39A14Q15043 492 aa17.16■□□□□ 0.34
SCAP-206ENST00000428413 ERFEQ4G0M1 354 aa17.16■□□□□ 0.34
SCAP-206ENST00000428413 ILDR1Q86SU0 546 aaPredicted RBP17.16■□□□□ 0.34
SCAP-206ENST00000428413 HPS5Q9UPZ3 1129 aa17.16■□□□□ 0.34
SCAP-206ENST00000428413 RIPOR2Q9Y4F9 1068 aa17.16■□□□□ 0.34
SCAP-206ENST00000428413 LOC102724428A0A0B4J2F2 783 aa17.16■□□□□ 0.34
SCAP-206ENST00000428413 CASP7P55210 303 aa17.16■□□□□ 0.34
SCAP-206ENST00000428413 SIK1P57059 783 aa17.16■□□□□ 0.34
SCAP-206ENST00000428413 IRX5P78411 483 aaPredicted RBP17.16■□□□□ 0.34
SCAP-206ENST00000428413 POSTNQ15063 836 aa17.16■□□□□ 0.34
SCAP-206ENST00000428413 MEX3CQ5U5Q3 659 aaKnown RBP17.16■□□□□ 0.34
SCAP-206ENST00000428413 SHC4Q6S5L8 630 aa17.16■□□□□ 0.34
SCAP-206ENST00000428413 ZSCAN29Q8IWY8 852 aaPredicted RBP17.16■□□□□ 0.34
SCAP-206ENST00000428413 CAGE1Q8TC20 777 aa17.16■□□□□ 0.34
SCAP-206ENST00000428413 SETDB2Q96T68 719 aa17.16■□□□□ 0.34
SCAP-206ENST00000428413 CCDC87Q9NVE4 849 aa17.16■□□□□ 0.34
SCAP-206ENST00000428413 SH2B2O14492 632 aaPredicted RBP17.15■□□□□ 0.34
SCAP-206ENST00000428413 TMCO3Q6UWJ1 677 aa17.15■□□□□ 0.34
SCAP-206ENST00000428413 MAPKAPK5Q8IW41 473 aa17.15■□□□□ 0.34
SCAP-206ENST00000428413 DYNLL2Q96FJ2 89 aa17.15■□□□□ 0.34
SCAP-206ENST00000428413 ISCA1Q9BUE6 129 aa17.15■□□□□ 0.34
SCAP-206ENST00000428413 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.15■□□□□ 0.34
SCAP-206ENST00000428413 ARGLU1Q9NWB6 273 aaPredicted RBP17.15■□□□□ 0.34
SCAP-206ENST00000428413 CTNND2Q9UQB3 1225 aa17.15■□□□□ 0.34
SCAP-206ENST00000428413 RAD51AP2Q09MP3 1159 aa17.15■□□□□ 0.34
SCAP-206ENST00000428413 NLRP3Q96P20 1036 aa17.15■□□□□ 0.34
SCAP-206ENST00000428413 PSMB7Q99436 277 aa17.15■□□□□ 0.34
SCAP-206ENST00000428413 KAT14Q9H8E8 782 aa17.15■□□□□ 0.34
SCAP-206ENST00000428413 TAB2Q9NYJ8 693 aa17.15■□□□□ 0.34
SCAP-206ENST00000428413 SEC31AO94979 1220 aaKnown RBP17.14■□□□□ 0.34
SCAP-206ENST00000428413 IPO7O95373 1038 aaKnown RBP17.14■□□□□ 0.34
SCAP-206ENST00000428413 YEATS4O95619 227 aa17.14■□□□□ 0.34
SCAP-206ENST00000428413 UBA7P41226 1012 aa17.14■□□□□ 0.34
SCAP-206ENST00000428413 DIXDC1Q155Q3 683 aa17.14■□□□□ 0.34
SCAP-206ENST00000428413 CCDC178Q5BJE1 867 aa17.14■□□□□ 0.34
SCAP-206ENST00000428413 NOM1Q5C9Z4 860 aaKnown RBP17.14■□□□□ 0.34
SCAP-206ENST00000428413 CAPZA3Q96KX2 299 aa17.14■□□□□ 0.34
SCAP-206ENST00000428413 BAG1Q99933 345 aaPredicted RBP17.14■□□□□ 0.34
SCAP-206ENST00000428413 UTYO14607 1347 aa17.14■□□□□ 0.33
SCAP-206ENST00000428413 CMA1P23946 247 aa17.14■□□□□ 0.33
SCAP-206ENST00000428413 TXLNAP40222 546 aa17.14■□□□□ 0.33
SCAP-206ENST00000428413 NCBP1Q09161 790 aaKnown RBP17.14■□□□□ 0.33
SCAP-206ENST00000428413 PLA2G4DQ86XP0 818 aa17.14■□□□□ 0.33
SCAP-206ENST00000428413 SOS2Q07890 1332 aaPredicted RBP17.14■□□□□ 0.33
SCAP-206ENST00000428413 ZNF652Q9Y2D9 606 aa17.14■□□□□ 0.33
SCAP-206ENST00000428413 ZMYM6O95789 1325 aa17.14■□□□□ 0.33
SCAP-206ENST00000428413 TMEM87BQ96K49 555 aa17.13■□□□□ 0.33
SCAP-206ENST00000428413 MROH7-TTC4A0A0A0MT08 1334 aa17.13■□□□□ 0.33
SCAP-206ENST00000428413 CAVIN2O95810 425 aa17.13■□□□□ 0.33
SCAP-206ENST00000428413 PRDX5P30044 214 aa17.13■□□□□ 0.33
SCAP-206ENST00000428413 GUCA1BQ9UMX6 200 aa17.13■□□□□ 0.33
SCAP-206ENST00000428413 ZNF569Q5MCW4 686 aa17.13■□□□□ 0.33
SCAP-206ENST00000428413 KRBA2Q6ZNG9 492 aa17.13■□□□□ 0.33
SCAP-206ENST00000428413 CNNM2Q9H8M5 875 aa17.13■□□□□ 0.33
SCAP-206ENST00000428413 TSPY3P0CV98 308 aa17.12■□□□□ 0.33
SCAP-206ENST00000428413 TSPY8P0CW00 308 aa17.12■□□□□ 0.33
SCAP-206ENST00000428413 LETM2Q2VYF4 491 aa17.12■□□□□ 0.33
SCAP-206ENST00000428413 SLC44A5Q8NCS7 719 aa17.12■□□□□ 0.33
SCAP-206ENST00000428413 CELF1Q92879 486 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms