RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 MLKLQ8NB16 471 aa18.19■□□□□ 0.5
C9orf3-206ENST00000428313 ANKRD24Q8TF21 1146 aa18.19■□□□□ 0.5
C9orf3-206ENST00000428313 RUBCNQ92622 972 aa18.19■□□□□ 0.5
C9orf3-206ENST00000428313 EAF2Q96CJ1 260 aaPredicted RBP18.19■□□□□ 0.5
C9orf3-206ENST00000428313 FMN2Q9NZ56 1722 aa18.19■□□□□ 0.5
C9orf3-206ENST00000428313 KDRP35968 1356 aa18.19■□□□□ 0.5
C9orf3-206ENST00000428313 ANKARQ7Z5J8 1434 aa18.19■□□□□ 0.5
C9orf3-206ENST00000428313 IRF6O14896 467 aa18.19■□□□□ 0.5
C9orf3-206ENST00000428313 PDIA3P30101 505 aaKnown RBP18.19■□□□□ 0.5
C9orf3-206ENST00000428313 INHBEP58166 350 aa18.19■□□□□ 0.5
C9orf3-206ENST00000428313 CKAP4Q07065 602 aaKnown RBP18.19■□□□□ 0.5
C9orf3-206ENST00000428313 HDGFL1Q5TGJ6 251 aa18.19■□□□□ 0.5
C9orf3-206ENST00000428313 STOX1Q6ZVD7 989 aa18.19■□□□□ 0.5
C9orf3-206ENST00000428313 CNGA4Q8IV77 575 aa18.19■□□□□ 0.5
C9orf3-206ENST00000428313 C8orf76Q96K31 380 aa18.19■□□□□ 0.5
C9orf3-206ENST00000428313 BOLA2Q9H3K6 86 aa18.19■□□□□ 0.5
C9orf3-206ENST00000428313 ATP6V0A4Q9HBG4 840 aa18.19■□□□□ 0.5
C9orf3-206ENST00000428313 SLC24A3Q9HC58 644 aa18.19■□□□□ 0.5
C9orf3-206ENST00000428313 MAP3K19Q56UN5 1328 aa18.18■□□□□ 0.5
C9orf3-206ENST00000428313 POLR3DP05423 398 aaPredicted RBP18.18■□□□□ 0.5
C9orf3-206ENST00000428313 EZRP15311 586 aaKnown RBP18.18■□□□□ 0.5
C9orf3-206ENST00000428313 CDR1P51861 262 aa18.18■□□□□ 0.5
C9orf3-206ENST00000428313 SLC8A3P57103 927 aa18.18■□□□□ 0.5
C9orf3-206ENST00000428313 TBC1D8BQ0IIM8 1120 aa18.18■□□□□ 0.5
C9orf3-206ENST00000428313 SNCBQ16143 134 aa18.18■□□□□ 0.5
C9orf3-206ENST00000428313 TLDC1Q6P9B6 456 aa18.18■□□□□ 0.5
C9orf3-206ENST00000428313 TMTC1Q8IUR5 882 aa18.18■□□□□ 0.5
C9orf3-206ENST00000428313 AENQ8WTP8 325 aaKnown RBP18.18■□□□□ 0.5
C9orf3-206ENST00000428313 NCOA5Q9HCD5 579 aaKnown RBP18.18■□□□□ 0.5
C9orf3-206ENST00000428313 FAM184BQ9ULE4 1060 aa18.18■□□□□ 0.5
C9orf3-206ENST00000428313 PCDHA5Q9Y5H7 936 aa18.18■□□□□ 0.5
C9orf3-206ENST00000428313 MAP3K15Q6ZN16 1313 aa18.18■□□□□ 0.5
C9orf3-206ENST00000428313 NRXN3Q9Y4C0 1643 aa18.18■□□□□ 0.5
C9orf3-206ENST00000428313 BMP6P22004 513 aa18.18■□□□□ 0.5
C9orf3-206ENST00000428313 CDC27P30260 824 aa18.18■□□□□ 0.5
C9orf3-206ENST00000428313 CLNS1AP54105 237 aaKnown RBP18.18■□□□□ 0.5
C9orf3-206ENST00000428313 NAP1L1P55209 391 aaKnown RBP18.18■□□□□ 0.5
C9orf3-206ENST00000428313 RBL2Q08999 1139 aa18.18■□□□□ 0.5
C9orf3-206ENST00000428313 RESP18Q5W5W9 173 aa18.18■□□□□ 0.5
C9orf3-206ENST00000428313 CCDC102BQ68D86 513 aa18.18■□□□□ 0.5
C9orf3-206ENST00000428313 NUDT16Q96DE0 195 aaKnown RBP18.18■□□□□ 0.5
C9orf3-206ENST00000428313 PBX1P40424 430 aa18.17■□□□□ 0.5
C9orf3-206ENST00000428313 TAF7Q15545 349 aaPredicted RBP18.17■□□□□ 0.5
C9orf3-206ENST00000428313 NBPF10Q6P3W6 841 aaKnown RBP18.17■□□□□ 0.5
C9orf3-206ENST00000428313 ACTR5Q9H9F9 607 aaPredicted RBP18.17■□□□□ 0.5
C9orf3-206ENST00000428313 MRC1P22897 1456 aa18.17■□□□□ 0.5
C9orf3-206ENST00000428313 PSMD14O00487 310 aa18.16■□□□□ 0.5
C9orf3-206ENST00000428313 SSR1P43307 286 aaKnown RBP18.16■□□□□ 0.5
C9orf3-206ENST00000428313 RCSD1Q6JBY9 416 aa18.16■□□□□ 0.5
C9orf3-206ENST00000428313 SHC4Q6S5L8 630 aa18.16■□□□□ 0.5
C9orf3-206ENST00000428313 FBXL16Q8N461 479 aa18.16■□□□□ 0.5
C9orf3-206ENST00000428313 SLC40A1Q9NP59 571 aa18.16■□□□□ 0.5
C9orf3-206ENST00000428313 DDX20Q9UHI6 824 aaKnown RBP18.16■□□□□ 0.5
C9orf3-206ENST00000428313 WWC3Q9ULE0 1092 aa18.16■□□□□ 0.5
C9orf3-206ENST00000428313 SRRM3A6NNA2 597 aaPredicted RBP18.16■□□□□ 0.5
C9orf3-206ENST00000428313 SASH1O94885 1247 aa18.16■□□□□ 0.5
C9orf3-206ENST00000428313 ADCY2Q08462 1091 aa18.16■□□□□ 0.5
C9orf3-206ENST00000428313 FOXP4Q8IVH2 680 aaPredicted RBP18.16■□□□□ 0.5
C9orf3-206ENST00000428313 CCDC13Q8IYE1 715 aa18.16■□□□□ 0.5
C9orf3-206ENST00000428313 ARMC2Q8NEN0 867 aa18.16■□□□□ 0.5
C9orf3-206ENST00000428313 NBPF3Q9H094 633 aa18.16■□□□□ 0.5
C9orf3-206ENST00000428313 PA2G4Q9UQ80 394 aaKnown RBP18.16■□□□□ 0.5
C9orf3-206ENST00000428313 FMR1Q06787 632 aaKnown RBP eCLIP18.15■□□□□ 0.5
C9orf3-206ENST00000428313 NT5DC1Q5TFE4 455 aa18.15■□□□□ 0.5
C9orf3-206ENST00000428313 ACRBPQ8NEB7 543 aa18.15■□□□□ 0.5
C9orf3-206ENST00000428313 CCDC8Q9H0W5 538 aaPredicted RBP18.15■□□□□ 0.5
C9orf3-206ENST00000428313 ZNF609O15014 1411 aa18.15■□□□□ 0.5
C9orf3-206ENST00000428313 ITIH6Q6UXX5 1313 aa18.15■□□□□ 0.5
C9orf3-206ENST00000428313 GOLGA6L7A0A1B0GV03 622 aa18.15■□□□□ 0.5
C9orf3-206ENST00000428313 SLC8A1P32418 973 aa18.15■□□□□ 0.5
C9orf3-206ENST00000428313 HSP90AA4PQ58FG1 418 aa18.15■□□□□ 0.5
C9orf3-206ENST00000428313 ALS2CLQ60I27 953 aa18.15■□□□□ 0.5
C9orf3-206ENST00000428313 TTC19Q6DKK2 380 aaPredicted RBP18.15■□□□□ 0.5
C9orf3-206ENST00000428313 PARP9Q8IXQ6 854 aa18.15■□□□□ 0.5
C9orf3-206ENST00000428313 MAB21L3Q8N8X9 362 aa18.15■□□□□ 0.5
C9orf3-206ENST00000428313 TRIML1Q8N9V2 468 aa18.15■□□□□ 0.5
C9orf3-206ENST00000428313 SH3GL3Q99963 347 aa18.15■□□□□ 0.5
C9orf3-206ENST00000428313 EPN3Q9H201 632 aa18.15■□□□□ 0.5
C9orf3-206ENST00000428313 RABEP2Q9H5N1 569 aa18.15■□□□□ 0.5
C9orf3-206ENST00000428313 MAN1B1Q9UKM7 699 aa18.15■□□□□ 0.5
C9orf3-206ENST00000428313 KIF23Q02241 960 aaPredicted RBP18.14■□□□□ 0.49
C9orf3-206ENST00000428313 G3BP1Q13283 466 aaKnown RBP eCLIP18.14■□□□□ 0.49
C9orf3-206ENST00000428313 HSP90AB2PQ58FF8 381 aa18.14■□□□□ 0.49
C9orf3-206ENST00000428313 NAA35Q5VZE5 725 aa18.14■□□□□ 0.49
C9orf3-206ENST00000428313 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.14■□□□□ 0.49
C9orf3-206ENST00000428313 ZNF483Q8TF39 744 aaPredicted RBP18.14■□□□□ 0.49
C9orf3-206ENST00000428313 MMS19Q96T76 1030 aa18.14■□□□□ 0.49
C9orf3-206ENST00000428313 MYBL2P10244 700 aa18.14■□□□□ 0.49
C9orf3-206ENST00000428313 ERCC5P28715 1186 aaPredicted RBP18.14■□□□□ 0.49
C9orf3-206ENST00000428313 MARCKSP29966 332 aaPredicted RBP18.14■□□□□ 0.49
C9orf3-206ENST00000428313 MDM2Q00987 491 aaPredicted RBP18.14■□□□□ 0.49
C9orf3-206ENST00000428313 MCMDC2Q4G0Z9 681 aa18.14■□□□□ 0.49
C9orf3-206ENST00000428313 EMC10Q5UCC4 262 aa18.14■□□□□ 0.49
C9orf3-206ENST00000428313 PAPD7Q5XG87 772 aaKnown RBP18.14■□□□□ 0.49
C9orf3-206ENST00000428313 APTXQ7Z2E3 356 aaKnown RBP18.14■□□□□ 0.49
C9orf3-206ENST00000428313 SPATS2LQ9NUQ6 558 aaKnown RBP18.14■□□□□ 0.49
C9orf3-206ENST00000428313 TLR7Q9NYK1 1049 aaKnown RBP18.14■□□□□ 0.49
C9orf3-206ENST00000428313 CCNHP51946 323 aaPredicted RBP18.13■□□□□ 0.49
C9orf3-206ENST00000428313 AP1ARQ63HQ0 302 aa18.13■□□□□ 0.49
C9orf3-206ENST00000428313 OTUD7BQ6GQQ9 843 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms