RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 TXKP42681 527 aa11.13□□□□□ -0.63
CLTCL1-202ENST00000427926 DHX32Q7L7V1 743 aaKnown RBP11.13□□□□□ -0.63
CLTCL1-202ENST00000427926 LEO1Q8WVC0 666 aaPredicted RBP11.13□□□□□ -0.63
CLTCL1-202ENST00000427926 LZTS2Q9BRK4 669 aa11.13□□□□□ -0.63
CLTCL1-202ENST00000427926 ZBED2Q9BTP6 218 aa11.13□□□□□ -0.63
CLTCL1-202ENST00000427926 UTP14CQ5TAP6 766 aaKnown RBP11.13□□□□□ -0.63
CLTCL1-202ENST00000427926 C2orf69Q8N8R5 385 aa11.13□□□□□ -0.63
CLTCL1-202ENST00000427926 FMNL1O95466 1100 aaPredicted RBP11.12□□□□□ -0.63
CLTCL1-202ENST00000427926 ATF7P17544 494 aaPredicted RBP11.12□□□□□ -0.63
CLTCL1-202ENST00000427926 PPP1R21Q6ZMI0 780 aa11.12□□□□□ -0.63
CLTCL1-202ENST00000427926 TBC1D31Q96DN5 1066 aa11.12□□□□□ -0.63
CLTCL1-202ENST00000427926 CCDC42Q96M95 316 aa11.12□□□□□ -0.63
CLTCL1-202ENST00000427926 ESYT1Q9BSJ8 1104 aa11.12□□□□□ -0.63
CLTCL1-202ENST00000427926 CACYBPQ9HB71 228 aaKnown RBP11.12□□□□□ -0.63
CLTCL1-202ENST00000427926 CUL4BQ13620 913 aa11.12□□□□□ -0.63
CLTCL1-202ENST00000427926 ZSCAN30Q86W11 494 aa11.12□□□□□ -0.63
CLTCL1-202ENST00000427926 TBC1D32Q96NH3 1257 aa11.12□□□□□ -0.63
CLTCL1-202ENST00000427926 RPS6KC1Q96S38 1066 aa11.12□□□□□ -0.63
CLTCL1-202ENST00000427926 A0A1W2PP64 1363 aa11.12□□□□□ -0.63
CLTCL1-202ENST00000427926 IREB2P48200 963 aaKnown RBP11.12□□□□□ -0.63
CLTCL1-202ENST00000427926 PIK3AP1Q6ZUJ8 805 aa11.12□□□□□ -0.63
CLTCL1-202ENST00000427926 MCF2L2Q86YR7 1114 aa11.12□□□□□ -0.63
CLTCL1-202ENST00000427926 ZNF830Q96NB3 372 aaPredicted RBP11.12□□□□□ -0.63
CLTCL1-202ENST00000427926 DNM3Q9UQ16 869 aa11.12□□□□□ -0.63
CLTCL1-202ENST00000427926 SORBS3O60504 671 aa11.12□□□□□ -0.63
CLTCL1-202ENST00000427926 SSFA2P28290 1259 aa11.12□□□□□ -0.63
CLTCL1-202ENST00000427926 UBE2HP62256 183 aa11.12□□□□□ -0.63
CLTCL1-202ENST00000427926 SKIV2LQ15477 1246 aaKnown RBP11.12□□□□□ -0.63
CLTCL1-202ENST00000427926 CCDC93Q567U6 631 aa11.12□□□□□ -0.63
CLTCL1-202ENST00000427926 MIER3Q7Z3K6 550 aa11.12□□□□□ -0.63
CLTCL1-202ENST00000427926 TMEM87BQ96K49 555 aa11.12□□□□□ -0.63
CLTCL1-202ENST00000427926 GIPC1O14908 333 aa11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 ZWINTO95229 277 aa11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 ZSCAN22P10073 491 aaPredicted RBP11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 TTLL3Q9Y4R7 772 aa11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 PZPP20742 1482 aa11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 DEXIO95424 95 aa11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 UBXN1Q04323 297 aa11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 NONOQ15233 471 aaKnown RBP eCLIP11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 PPP1R7Q15435 360 aa11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 CERKLQ49MI3 558 aaPredicted RBP11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 TNNI3KQ59H18 835 aa11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 MRPL11Q9Y3B7 192 aaKnown RBP11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 FPGT-TNNI3KV9GXZ4 949 aa11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 ATP7AQ04656 1500 aa11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 GMNNO75496 209 aa11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 IGBP1P78318 339 aa11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 KIAA1841Q6NSI8 718 aa11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 CTR9Q6PD62 1173 aa11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 CDC37L1Q7L3B6 337 aa11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 MYCT1Q8N699 235 aa11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 SLC10A4Q96EP9 437 aa11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 MTUS1Q9ULD2 1270 aa11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 GAS7O60861 476 aa11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 GCKRQ14397 625 aa11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 SEL1L2Q5TEA6 688 aa11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 KRT25Q7Z3Z0 450 aa11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 SPATA24Q86W54 205 aa11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 SEPT12Q8IYM1 358 aa11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 MICAL1Q8TDZ2 1067 aa11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 CARD14Q9BXL6 1004 aa11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 V9GY48 417 aaPredicted RBP11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 MAST1Q9Y2H9 1570 aa11.11□□□□□ -0.63
CLTCL1-202ENST00000427926 SPDYE16A6NNV3 312 aaPredicted RBP11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 YWHAEP62258 255 aaKnown RBP11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 IFRD2Q12894 506 aaPredicted RBP11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 SPDYE2Q495Y8 402 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 CFAP157Q5JU67 520 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 APPBP2Q92624 585 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 TMEM94Q12767 1356 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 CLRN2A0PK11 232 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 PPP1R2P41236 205 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 GNG11P61952 73 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 KRT83P78385 493 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 RNF187Q5TA31 235 aaPredicted RBP11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 CSRNP2Q9H175 543 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 ARPP21Q9UBL0 812 aaPredicted RBP11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 ZFYVE16Q7Z3T8 1539 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 RTL1A6NKG5 1358 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 LOC102724428A0A0B4J2F2 783 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 TNFAIP3P21580 790 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 SIK1P57059 783 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 KIF5AQ12840 1032 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 FAM182BQ5T319 152 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 MICALCLQ6ZW33 695 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 BRAPQ7Z569 592 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 SESTD1Q86VW0 696 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 IBTKQ9P2D0 1353 aaPredicted RBP11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 USP14P54578 494 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 TFAP4Q01664 338 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 RNASELQ05823 741 aaKnown RBP11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 KRT24Q2M2I5 525 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 ERFEQ4G0M1 354 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 CREB3L3Q68CJ9 461 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 TTLL7Q6ZT98 887 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 FBF1Q8TES7 1133 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 SUGCTQ9HAC7 445 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 BABAM1Q9NWV8 329 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 USP25Q9UHP3 1055 aa11.1□□□□□ -0.63
CLTCL1-202ENST00000427926 HSF2BPO75031 334 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms